LOC122334044


Basic Information

Item Value
gene id LOC122334044
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048114.1
NCBI id JAEQBD010000459.1
chromosome length 1423374
location 1119707 ~ 1124593 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043231933.1
aatactcaacttttttttatataacataataatttaacataaaaactaaccctttaaatgaaCATTCTATAAGAACCTTACGGGAATGTTGGCCAAAGAACATTTCCTCATAAAGGCATTGTGTTTAACTTAATTCATAACATGCCCATAATTCCATCCGCCCAGAACAAAGCTACTTGCTAGGAACCCTTAACAATGGCATTTATAAAatagtctctgtctgtctctgcagAACAGCATATGCCACTGTTGACTCATGATTTCAGATTACGGGAACATTAGGATCCACCCGTGACCCGGAAACATTTCATTCTGTCTGATAAAAATACCAAAACTATTTAGGCAGTTCAATGTGTTTGAAAGACATTTAATTATCACTCTATGATTTAAAAAACCATAGAGTGATAATTCAAGAAAAAATGTACGTCTTTATCAGTAgatgcaatttttaaaatgcattttaaattgtacatgAAATCAGTTGCTGTGCACAAAACTAGACTTTCTGAACACTTGCATAGCAGTCAGTTACGTTCGAACATGCATTCgaataaacaataaactgaaatatgttcTGCCTCGTTTTTAGGCTATTAGGGCACATTTTTTACCGTAAAGGAGTGGTGATGTTATTGTATTGTAATCAGTGGGAAGTGTGCCATTGCTGtcaatgtgtttatttacatcaGAGCAATTTTGTGGGTGGAGTTTAAGGACAGTAGCTATATTAATTAACTCATAACTCATGTGTTCATTTTTGTGGTTCGGTAGCAAAACAAAACTTGAAAGATGTTTAgatgtattatgtttattggATTGGCTTTGCTGACCGATAGATCGGTACCAACAGCTGGAGGAACATCCACATCTCCATCGACAAGCGTAACAGCACCCGACTCGACATGTGTAATAGCTACGGCGACATCTGTAGCACAATTGAGAAGAAATCCTGCTCCGACATGCATTTTAGCTACAGCAACATCATCTGCATCTCCCTCTGCAGTCACTGAACCGGCATCAACGACTGAGCCGAGTTTGAGTTCAGTCGCGCTTACGTCTACCACGACGTTAACATCTCCTCCTGCTTCTCAAACGACATCTTCAACTCCACCAAGCCAGTCTACGACTTTGTCTCCAGACGCTGTCCCACAAACATCTGCGTATGCGGCTTTCCAACTGAGATCCTCTGTTGAGCTTAGCAGTGATGAAATCATTGCTCATGTTGAAAAGtttGTCGAGCACTTTCAAGCCAACTTTAGCGGGGCCGTAAAGATTACTTTGAAGAAGTCGGAAAAACTGTTGGCGTAAGGTTACGTCAGGTTATGTAACGTATCTCCGTCGTCGATCGCATTCGTGAGGTTTTGGACTTCTCGCTCAATGCCTTCTGTGAAGACACTTCATATTTTGACGTTCAGTGGTTctgaaaatgcaataatatattGAACATGCATGCAAAGTTTCCACATGGGTTTTGACATGTCCAAAAAAAGTTGTTCGTACCGTGCCCGGGTCAATTTGACCcgcctatttttaaaaaataacattttttctgTCTATCTGAAATACTATTtaactttgttgttgttgtttgtccCACTTTTTGTGCATAgacataaaaatgacttttgtggcTACAATTGTTCCCAAACTTAAATACGTCAGAGCGCAAAATTAGGATTGGtgtctttttaaagataaaaccTCACCAATTTATAAGAGTAAATAAGTGATAGaagtttaaatgtataataatttaatatgtatcatataaatgtaaatatatagcatattttacaaaacatatttacaactAAATCTTCAAGTAAATCAAAGCCATATCATTTGAGCAAAGTTGTGCACAAAAGTTTAGGTtgatatctaaaaaaaattacttttgtggAAATAACGGCTAAAAACATGATAGATTCAGATATTCGTTATTTGACATTTATGAAAACTACCAATATTAGATGTTTATTGATTGCACTTGACTGTATGTTTGTTGGTTTTCTTATATTTTGTGACGTTATGAAACCTGTTTTCGAACAGCAGACGAGGGTCAATGTGAAAGAACCTTtatccagaagaaaaaaatccttaataaaagctttttttttttaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043231933.1 True 2125 mRNA 0.36 4 1119707 1124593

Neighbor

gene id symbol gene type direction distance location
mccc1 mccc1 coding upstream 318370 793163 ~ 801337 (+)
LOC122334053 lamp3,LOC107747931,LOC107566879,LOC107752186,LOC107736124,LOC107550665 coding upstream 327152 789232 ~ 792555 (+)
trnag-ucc_28 NA coding upstream 361412 758224 ~ 758295 (+)
LOC122334017 LOC107577399 coding upstream 404622 699245 ~ 715085 (+)
amigo3 LOC107719706,LOC107661914,LOC107592822,LOC107703752,LOC107726275,LOC107562412 coding upstream 591432 516883 ~ 528275 (+)
LOC122334039 NA coding downstream 30682 1155275 ~ 1159822 (+)
psmd1 psmd1,LOC107566382,LOC107655280,LOC107698053 coding downstream 40736 1165329 ~ 1195429 (+)
LOC122334042 NA coding downstream 219958 1344551 ~ 1346837 (+)
trnat-ugu_55 NA coding downstream 247782 1372375 ~ 1372448 (+)
trnar-ucu_54 NA coding downstream 248295 1372888 ~ 1372977 (+)
G183403 sox2,LOC107698049,LOC107550678,LOC107655276,LOC106584342 non-coding upstream 49575 1000056 ~ 1070132 (+)
G183404 NA non-coding upstream 96548 1022147 ~ 1023159 (+)
G183342 NA non-coding upstream 220801 804512 ~ 898906 (+)
G183338 NA non-coding upstream 331887 787610 ~ 787820 (+)
G183318 NA non-coding upstream 354775 694820 ~ 764932 (+)
LOC122334033 NA non-coding downstream 8610 1133203 ~ 1135105 (+)
LOC122334055 NA non-coding downstream 21449 1146042 ~ 1147773 (+)
G183466 NA non-coding downstream 39831 1164424 ~ 1164872 (+)
G183463 NA non-coding downstream 98675 1223268 ~ 1226091 (+)
dnajc19 dnajc19,LOC107727073 other upstream 30817 1085804 ~ 1088890 (+)
G183354 NA other upstream 272993 845580 ~ 846714 (+)
G183316 LOC107566876,LOC107747932,LOC107655274 other upstream 332767 783284 ~ 786940 (+)
G183328 NA other upstream 367655 749860 ~ 752052 (+)
nicn1 nicn1,LOC107691891,LOC107678153,LOC107708487,LOC107564394 other upstream 1058948 46644 ~ 60759 (+)
LOC122334032 NA other downstream 3270 1127863 ~ 1145945 (+)
G183477 NA other downstream 129358 1253951 ~ 1258660 (+)

Expression


Co-expression Network