G185333


Basic Information

Item Value
gene id G185333
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 134637 ~ 136258 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU275033
tttacaatttattcgGTTTTATTAATTCGtgataaaaaatagtaaaagcaaaaataaaaaagccttgtgtttTCGTCTCGCTTGCTTACTAAAATGATACCCTAGAAAAGTGAACTCTCGCTTCGTTTCGGTCGTCGCTCccatgaaataaaacacaggcTCGCGTTCGTCAGCTACTCATGATGTATTGTtgcaatacaaaacaaaacatgaaataaatccATAATTGGAATAATTACGAGGAACTTGAGGCCCCCCCGAACGGCCACCGTACAAAAGTTAATACCGTCGATACCACAAGCGACCGTTCAGATCAAATCAAAAGAACAGTTCTTCTAAAAACAGAGGCATTTCATGGAGAGTAACACACAGTCGTTCAGTAAAGGCCGAAGTTTTGGTGTAAAGCAAAGTCGTAACACTACATCAGGCTCGAAAACACACATTTGGTCACACAAATCAGACGTAAAGAGACATCCATCGACACGACTGAAACGTTCTCGCTCGGGTACAAGGACGCAAGCGTCCGAAATGAGACGTCCGTTCAGACAAAGACACGTatgtacagagagagagagagaggaagagagagagagagagaggaagaggagcaggTTCAGGACACAGTGCAGTAAAAGTCGAGGTCGCTGGTTTAGTTGAAGCCCTGCGTGCGAACACAGACCAGAACGGGAGAAAACGAACGCTACGATCTGAGGAACGCGTTTAGAAGCTCTCAGTTATTATCGGACCTAGCGTGCAGTCGTTCTAGCGGATGCTTCATTAAAAAACGGATTCAGAATGTACATACGTTTTAAGAAACTCGTGAGAACCCGGAACGTTCCGGTAACGTTAATGGAATGTTCACGAGTTCTCTGATCTTTAAGAACGTTTTTTTTATACTCTGTGGAACGTTTCCCTCCAAAATTGGACGTTTATGTTgcgttttttaaatgttactaaatTTAGAACGTTCAGAGAAGATTTGAAAGTAACGCCACGAATGGATGTTCGTGACGGGAACATTAGGAAAACGTTCTTAGTTTCTGGAATTTTAGTCGGATGGTCAtctaataaaacacttaaagtcGTGAACATTCAGAGAACATTCAGGAATAATATAACTTAACGTTATTAAAACATTCCTGAAacgtatttttgttattttggccaGTGGGGGAGAattaatatttgctaaatattaagCGTTATGAAATTATCGCAGTGGCTTTTTCCAGTTCTGAACTCTAACAAAGCCAACATGTAAATGAATGTGAATTAGCGCAGAGCTTAGCGTTCATGTGAACGACTTTCAGAATCCGGATTCATTTGAGTGCATGTGAACGAACAGCCTGGACAGCGCTGGAGGCTTCAGAGTCAGGAAAACACTTGAATATGAGGACTAAGTGATGCTGGATCAACACCACCAAGAACTGAGAGAAGgcggtctggtctggtctggtctggtccgGTCTGGTCTCGGTGTTGAGGTTTGTGTCGGTGATCAGGGTTTCTCTTCTTCTGCGCCTCCGGAGAGATTCTTCAGACTA

Function

GO:

id name namespace
GO:0005261 cation channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275033 True 1544 lncRNA 0.42 2 134637 136258

Neighbor

gene id symbol gene type direction distance location
wu:fy63c09 LOC107701241 coding upstream 285 122174 ~ 134352 (+)
LOC122334533 LOC107730023,LOC108435576,LOC108276020,LOC107701242,LOC108249164,LOC107101953 coding upstream 32462 94764 ~ 102175 (+)
ednrab ednrab,LOC107565324,LOC107730027,LOC107570196,LOC108435575 coding upstream 42524 83329 ~ 92113 (+)
LOC122334561 cyp17a2,LOC107574436,LOC107750198,LOC107673162 coding downstream 49920 186178 ~ 193997 (+)
LOC122334540 LOC108275604,LOC102207396,LOC108413728,LOC107570188,LOC107702147,LOC102785773,LOC107737977 coding downstream 83693 219951 ~ 234238 (+)
toporsb LOC107750189,LOC107673181,LOC107575337,LOC107702170,LOC107737957 coding downstream 101003 237261 ~ 245179 (+)
ddx58 ddx58 coding downstream 109035 245293 ~ 257813 (+)
LOC122334538 LOC107750194,LOC101884488,LOC107564762,LOC107708036 coding downstream 130023 266281 ~ 274870 (+)
trnaq-uug_24 NA non-coding upstream 82803 51763 ~ 51834 (+)
LOC122334578 NA non-coding upstream 84849 49034 ~ 49788 (+)
G185324 NA non-coding upstream 85893 48227 ~ 48744 (+)
G185321 NA non-coding upstream 88274 45987 ~ 46363 (+)
G185318 NA non-coding upstream 89568 44279 ~ 45069 (+)
G185352 NA non-coding downstream 1670 137928 ~ 138636 (+)
G185345 NA non-coding downstream 20686 156944 ~ 158197 (+)
G185363 NA non-coding downstream 29258 165516 ~ 167319 (+)
G185407 LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148 non-coding downstream 65784 202042 ~ 263099 (+)
G185432 cfi,LOC107737955,LOC107737970 non-coding downstream 167096 303354 ~ 310514 (+)
ctc1 ctc1,LOC107580117 other downstream 277487 413745 ~ 427951 (+)
plod3 plod3,LOC107709211,LOC107673154,LOC108414592,LOC107737962,LOC107676175 other downstream 402097 538355 ~ 590185 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 449261 585519 ~ 586595 (+)

Expression


Co-expression Network