G185363


Basic Information

Item Value
gene id G185363
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 165516 ~ 167319 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU275076
gtgtgtgtgtgttttacctggTGCTGCGTGAGTACTCATCTTTGCTCTCCTTCTTTCCACGAGATCGAGGTTTGAGGTTGTGAAGAACGAGAGACTGAGTCTGACAGCACCACTGAGACAGAGTCATCAggaactacacacacacacacacacacacacaggaggtTAGCTCGGTCTTtgctctacagcgacctctagAGATGGTTATCAGCTGAGGAAACCATTTTGGCAGGGGTTGTTTGTGGACTGTATCTGAAAGAAGCTCCTGAACAGGTGAGTGAACTGAGTTTCTATCTTCTGCTGATGTTTGCTGATCTGGAGGCTTTGGTTGTTGGTGTACACAAGGATTGGGAGATTTGCTTTGGTCGGATTTTTGGACTTCATTTGTTTGGATGAAGCCTTTGTGAATTCAAGCTGTGCAAATGAAAACGACTTCAAAAAGATGGCAGCATGATGACGTGCCGTTTCCTCAGGTCTGATGATTCTCTCCATCTTTGTTTCATTACGTGCCAGTGGCGACCGTTCAGCGTTAACAGGCTCAACTCAAGAACTATTAAAGACATCTCAGTATCCTTTTAGATTtcaaacacaacaaaagcatgatatttggaaatatgtactgtatgtatttgcaaataaactgtttatataatatgccTTTTTACACAATCTCAAGATATTTTGTGGTTCTTTATCTTAATCTTTAAGGTCCTATACGAGATATGGGCATCTCAATCCGGCTAAATTGTTGAATTGTACccattttcactttttgcaaaacataaCACAAATCTGACAGTGACTAATATAGCAAAGGTGTTTGCAAATGTCGGCTTTTGCAAATGTCGGCTTTCAGGACGTCTTCAACACAGTACTTTATTTTGCACGAGATAAGCAAGGCACTTCACATTTTGAGTTTGCGAATCTAGGGTTCGTTTGTAAAGTTCTGAAAAATTGCTACCTGGTCTCGTGGCGtaaacgtacctgggtgcactttttagcgagacacgaaattTACAAAAGATATGAAGCTGTATCACATTTCCAATATGATAGAACCGCCACAATGCATACctatatcataaaatataaaattgtgccagggtttacgtattgaacctgtgttttaaagccactcagtggacacttctctttgaaactgtggagGAACGTGCAGAGAGGTTCATAAAAactgtgttgcacaaaaagcGCAGGTTGAAAAAGTTATATAGAATTTTATCTAAATTCATTATTCgttcatgcatttcttttactCAAATGTCtccactgtcacttttgatcaatttaatgcatcctgaGTGATAAgcatttgtgtgcatgtgtgtgtgtatgcatatttgtgtgtgtgcaactggtatttatcacgttatgggacCAAATGTCTCCACAAGGATAGTAATCCCAGTAAATGTTGTCCTTGTAGGACATTGTTTAGGTCCCCTTGAGGAAATAGGCTTATAAACATACAGGATgaagttttttgaaaatgtaaaaatgtgagtagtttcctgtaagagaacaataacacacacagtctgtacagaattAAAAgattacacctatgaagagtccccataaaacatggaaacacaacctgtgtgtgtgtgtgtgtgtgtgtgtgtctggtgttcttgccTTTGATGACACTCGTGCGTTTTCGAGTGTGACTCTGGTCCAAACAGCAGGATGACGTGCGACACTGCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275076 True 1727 lncRNA 0.40 3 165516 167319

Neighbor

gene id symbol gene type direction distance location
wu:fy63c09 LOC107701241 coding upstream 31164 122174 ~ 134352 (+)
LOC122334533 LOC107730023,LOC108435576,LOC108276020,LOC107701242,LOC108249164,LOC107101953 coding upstream 63341 94764 ~ 102175 (+)
ednrab ednrab,LOC107565324,LOC107730027,LOC107570196,LOC108435575 coding upstream 73403 83329 ~ 92113 (+)
LOC122334561 cyp17a2,LOC107574436,LOC107750198,LOC107673162 coding downstream 18859 186178 ~ 193997 (+)
LOC122334540 LOC108275604,LOC102207396,LOC108413728,LOC107570188,LOC107702147,LOC102785773,LOC107737977 coding downstream 52632 219951 ~ 234238 (+)
toporsb LOC107750189,LOC107673181,LOC107575337,LOC107702170,LOC107737957 coding downstream 69942 237261 ~ 245179 (+)
ddx58 ddx58 coding downstream 77974 245293 ~ 257813 (+)
LOC122334538 LOC107750194,LOC101884488,LOC107564762,LOC107708036 coding downstream 98962 266281 ~ 274870 (+)
G185345 NA non-coding upstream 7319 156944 ~ 158197 (+)
G185352 NA non-coding upstream 26880 137928 ~ 138636 (+)
G185333 NA non-coding upstream 29258 134637 ~ 136258 (+)
trnaq-uug_24 NA non-coding upstream 113682 51763 ~ 51834 (+)
LOC122334578 NA non-coding upstream 115728 49034 ~ 49788 (+)
G185407 LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148 non-coding downstream 34723 202042 ~ 263099 (+)
G185432 cfi,LOC107737955,LOC107737970 non-coding downstream 136035 303354 ~ 310514 (+)
G185443 NA non-coding downstream 217218 384537 ~ 385010 (+)
G185446 NA non-coding downstream 240141 407460 ~ 409065 (+)
G185457 NA non-coding downstream 304952 472271 ~ 531021 (+)
ctc1 ctc1,LOC107580117 other downstream 246426 413745 ~ 427951 (+)
plod3 plod3,LOC107709211,LOC107673154,LOC108414592,LOC107737962,LOC107676175 other downstream 371036 538355 ~ 590185 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 418200 585519 ~ 586595 (+)

Expression


Co-expression Network