G185405


Basic Information

Item Value
gene id G185405
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 541629 ~ 544613 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU275144
atacattttttttttaatattcacagaTAAATTGAAACAGCGTtgatttgaaacagaaatcttttgtaacattataaacgtcTTACTGTCAGTTTTAAAGATCAATTTAATGATCCTcgatgaataaatgtattcattcaatCTCACCGACGTCACACTTCTGAACAGTAGCTTTAATTAagaatcttttttattataatttatatattttattatttttaattaattgtgtaatttatgCTCTTATTTATCTTATTAAGATTGTACATTGCCCATaaacttaattaattaaaaaggaaagtaTAGATGATTTATACATACAGCTTCATACTTGTTTGAagcaaataaatgttcattaataAACTTGCCAAtgattagctttttttaattctcagtAATCTGTGAAGCGTTTTGATGTATCATTTGTATATTCACTTTACATTCACATTGCAATGGTACTAGATCATCAGAACTGATTTAAACACAGCGCAGCATTACTATACAGTAACATCATTACAACATTACTGtaacaacacaaaaatgaacatcCTCACCCTCGCTCCGTCTGAGATCTATCTAAACCATGactacaaaataaagtgaattgTTTGGTTGATTATACACAGAAGATGGTGAGTTTTTATATTCCCGCTGATGTGGTTTAGATGGAGGAGGCGTGAGCTTTGCAGACGTAGCGGTAGTGCCGAGAGCAGTGGTCATCGTTATAGCGTCCGTCGTGATGAAAGTGAGCGCAGTCTTCTCCGCCTCCCAAACCATGATGCTTCCAGTCATCCGGCTGACCGGGCATCCattcactgcacacacacacacacacacgtgatgaGCGCTGGAGTGTGAGCGAGGCTCCTGGcggcgcacacacactcacctcctgATGATGGTGTAGGGCGTCCTGTCCAGCCATTCCCACTCACCGGTGCGTGCGTCACTCAAACCCAACCAGTAGTACAGAGGCCTGGTCTTACTGACCACGaaagtctgaacacacacaatTAGTCTGAATAAACATATATTCAAAGAAATCAGACCAACGAGAGAGCAACAACAATATATGTGTGCCCTGACAGGTCTCGGGTAGTCTAGCACAGTACACTTAACaagggttttattttaaataaatagaccAAACAAAGTTATGTTGGTTCAGTTGTATTGGTTTAGTTATGTTGGGTAGTTCTGTTTGTTTAGTTCTTCTGGTTAAGTTGTTTTGGTTCAGTTGTATTGGTTTAGTTATGTTGAGTAGTTCTGTTGGTTTAGTTCTTCTGGTTAAGTTGTTTTGGTTCAGTTGTATTGGTTTAGTTATGTTGGGTAGTTCTGTTAGTTTAGTTCTTCTGGTTAAGTTGTTTTGGTTCAGTTGTATTGGTTTAGTTATGTTGGGTAGTTCTGTTAGTTTAGTTCTTCTGGTTAAGTTGTGTTGGTTCAGTTGTATTGGTTTAGTTATGTTGAGTAGTTCTGTTGGTTTAGTTCTTCTGGTTAAGTTGTGTTGGTTCAGTTGTATTGGTTTAGTTATGTTGAGTAGTTctgctggttttgtttttctggttaagttgttttttattgtttaatgaaGTTTGAAAAAAATCCACATGATTTAAACAGTTATAAAGTTGAGTAGTGGGTTCATTTAGTTATTCAGGTTAAGTTGCTTTGGTGTACTTGTGTTGAGTAGTTTAGTTGGTTAAGTTGTACAGTACGAACCAGTTCTGACCTTCTCTGGTTTGCTTTTTAAGACGAGTAACTCGGATCTCTTCTTCTTACACTCATCTTTGGCTGCGTCCCACGGCATCCCATCATTAGAGAAGAAATAACAGTGTGAGGAGAAGAGCAGCCATCCTTCAGGACAGCACAGCTCCTGCgtgtctgaacacacacacacacacacacacacacacgtgtgacTCTCTGCACGAGACACCAGGACACACTACTACAGCATCACTTACTGTTGTTCTTTAACTTGTTAATCTGGCATTTCAGATCTGAAACTCTGTCCCGGAGCTCCTGCACTGAATCCAAcactaacaaacacacatatattaagaCTGATTTTGCGTTGTTTTGTCTggatgtgtatttgtgtgctaCTTACTATTATTAAGCATGCTTTCCATCGTCACTTGATCAAACTCCAGACTGCTGATCTCCAAAAGCAGTTTATTT
>TU275145
atacattttttttttaatattcacagaTAAATTGAAACAGCGTtgatttgaaacagaaatcttttgtaacattataaacgtcTTACTGTCAGTTTTAAAGATCAATTTAATGATCCTcgatgaataaatgtattcattcaatCTCACCGACGTCACACTTCTGAACAGTAGCTTTAATTAagaatcttttttattataatttatatattttattatttttaattaattgtgtaatttatgCTCTTATTTATCTTATTAAGATTGTACATTGCCCATaaacttaattaattaaaaaggaaagtaTAGATGATTTATACATACAGCTTCATACTTGTTTGAagcaaataaatgttcattaataAACTTGCCAAtgattagctttttttaattctcagtAATCTGTGAAGCGTTTTGATGTATCATTTGTATATTCACTTTACATTCACATTGCAATGGTACTAGATCATCAGAACTGATTTAAACACAGCGCAGCATTACTATACAGTAACATCATTACAACATTACTGtaacaacacaaaaatgaacatcCTCACCCTCGCTCCGTCTGAGATCTATCTAAACCATGactacaaaataaagtgaattgTTTGGTTGATTATACACAGAAGATGGTGAGTTTTTATATTCCCGCTGATGTGGTTTAGATGGAGGAGGCGTGAGCTTTGCAGACGTAGCGGTAGTGCCGAGAGCAGTGGTCATCGTTATAGCGTCCGTCGTGATGAAAGTGAGCGCAGTCTTCTCCGCCTCCCAAACCATGATGCTTCCAGTCATCCGGCTGACCGGGCATCCattcactgcacacacacacacacacacgtgatgaGCGCTGGAGTGTGAGCGAGGCTCCTGGcggcgcacacacactcacctcctgATGATGGTGTAGGGCGTCCTGTCCAGCCATTCCCACTCACCGGTGCGTGCGTCACTCAAACCCAACCAGTAGTACAGAGGCCTGGTCTTACTGACCACGaaagtctTCTGGTTTGCTTTTTAAGACGAGTAACTCGGATCTCTTCTTCTTACACTCATCTTTGGCTGCGTCCCACGGCATCCCATCATTAGAGAAGAAATAACAGTGTGAGGAGAAGAGCAGCCATCCTTCAGGACAGCACAGCTCCTGCgtgtctgaacacacacacacacacacacacacacacgtgtgacTCTCTGCACGAGACACCAGGACACACTACTACAGCATCACTTACTGTTGTTCTTTAACTTGTTAATCTGGCATTTCAGATCTGAAACTCTGTCCCGGAGCTCCTGCACTGAATCCAAcactaacaaacacacatatattaagaCTGATTTTGCGTTGTTTTGTCTggatgtgtatttgtgtgctaCTTACTATTATTAAGCATGCTTTCCATCGTCACTTGATCAAACTCCAGACTGCTGATCTCCAAAAGCAGTTTATTT

Function

GO:

id name namespace
GO:0048584 positive regulation of response to stimulus biological_process
GO:0002376 immune system process biological_process
GO:0002682 regulation of immune system process biological_process
GO:0002684 positive regulation of immune system process biological_process
GO:0050776 regulation of immune response biological_process
GO:0050778 positive regulation of immune response biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU275144 True 2181 lncRNA 0.38 2 541629 544613
TU275145 False 1449 lncRNA 0.40 2 541629 544613

Neighbor

gene id symbol gene type direction distance location
tfr2 tfr2,LOC107730361,LOC107673155,LOC107676171,LOC107660828,LOC107709213 coding upstream 77428 451287 ~ 464201 (+)
LOC122334569 NA coding upstream 106704 431117 ~ 434925 (+)
sh3gl2b sh3gl2,LOC108276379 coding upstream 135401 388194 ~ 406228 (+)
si:ch73-168d20.1 LOC107730363,LOC107564766,LOC107673183 coding upstream 154222 371427 ~ 387407 (+)
LOC122334546 NA coding upstream 170334 361902 ~ 371295 (+)
G185457 NA non-coding upstream 10608 472271 ~ 531021 (+)
G185446 NA non-coding upstream 132564 407460 ~ 409065 (+)
G185443 NA non-coding upstream 156619 384537 ~ 385010 (+)
G185432 cfi,LOC107737955,LOC107737970 non-coding upstream 231115 303354 ~ 310514 (+)
G185407 LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148 non-coding upstream 278530 202042 ~ 263099 (+)
LOC122334532 NA non-coding downstream 37439 582052 ~ 593003 (+)
G185402 NA non-coding downstream 45702 590315 ~ 600124 (+)
ctc1 ctc1,LOC107580117 other upstream 113678 413745 ~ 427951 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 40906 585519 ~ 586595 (+)

Expression


Co-expression Network