G185407 (LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148)


Basic Information

Item Value
gene id G185407
gene name LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 202042 ~ 263099 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU275150
CTGGCGCATAACTAGTCgcgttattgtgatgttttaccttcgcaaaaataacaaaaacttactcagtgttttttaaaacgACGCCGGTCGTGCAAAACTGAGACATGACTGATAAGAGCACAACAAGCTCCTTTTACCTGGTGGAGGACACAGGTGTCCGTATGCGCTGTCAGGATCATCTACAAAGAGAACACAGATCACAACAATCAACCATAATTCATATTAGCATCCTTTCATCCTCAGCTCCGATCTCACAAACGAGACGCGCGCGACGTTATTCGTGTAATATGTGACGGCGGCGAGGAAAAAGAGGCCGAATGCAAACGCTATTCGGCGTTAATCCAGCGCACGTCCTCAAACTTCGATCGTTAAAGCAACAAATGTTTCCGTTCGCGCGTCAGACGCAGCGGCAGCCCGCGCGTCCGAGCGTCGAGCCTTCGGTGAAAACGGCCGCGCGGTTGCATCGCCGGCGTAGACGCACCGACCGTGTTGTCGTGGCGAACGGCCTGTAAACGAAGTCGCCCGCGATGCGCTCATTTCCTCGGGTCCCGCGCCGAGCGTCTCTCTCCGTCCGCCATTTCCGCCCGCTCCAGCCGCCGCATCGCACGCGACCGCGCGCGCCGTGATACGCACCGACGAGACGCGCCGCGCGTTAAAAGCCTCGCTGCTCGCCTGCGTGCGTTTTACTCAAACGCATAATCtcgctcttttcttttttttttttttttttttGTCACAGTTCAAAAAGGATCACATTTAATCAACAAGCCATCCTAAGAGTCTCTTATTCATCAAGACAGTGAGGCGTCACAACAGCAATaaacaaagttattttcttaaagtctttagttaaaaacaaaacacttttctaCCCATGCAACAGAAAGGTGGTTTAAAGGAACGGCTCGCTCAGAAACGAACCTTCTGTCGCCGTTTACTCGTCTCGAGACCCGTatgacttgctttcttctgtggaacgaGGACAATTGTTCAAGAATATCATGGCTGTTCCTTGCAAGAGGAGGTcaaatgtgacaaataaaaaactCAACGTGTCTGTCTTTTGGCGAACCcatatattaatagtattaatcGTACGGACTGCTTTTATAAACATGAACTTGTAGGTGAACGTTTAAAGCGTATCCTGGATAATCTTATGAAACGAGAAGCCAGGTGGTGGTTTTTAACTTCAGAGAACCTGTAATATAGGTTCATATCATTTTTCTGTTCAACAAGATACATTTGTCAATCAATTGTTGATCAAATGAAATCAGATGCTTGTTTTCCCGCTATAATGTAGTGCATTAATcgtttcttctgtggaacgAGTATTTTTCCAGAACATCGATCAAACGGAAGGGAGGTCTTTTCTCAACACGGCTATCGTGTGTCTTCAGATAACTTCGAATATAGCGCTTTAACCGCATGGAGTGCTTCCATAAACCTAAACCTGTGCACTTTTTGAATCGCAGAGATTTAATGCATGCTCCTTTTGTCTTCCGTAGAAGCAAGCAAGTGATCagaacgacacgagggtgagtaaatgacgaccGCACATTCGATTTCAGGTGGACTGTTCCTTTAGGCTCGGACGGGGCCCTGATACGACTGAATTCAAGTCCCTGTTTCTCTGCGTCCGTTGGTGTTCGGTTGAGGTGAGGTCAGTCCGAGACCCAGAGACTTGCCCTCCATGTCTTTCCAGCGCCCCCAGTGCTAAACGGGCCACAGTGAGTCCTGAGGGGAAGGGTAGATTGTAGGTGAATGACCTGCAGTTCTTCTAGTGTTTGAGTCCGGCTGTATGATGTGGATCGGTGGCGGGTTCTTCAGAAGAACCAGCGGAAAGTGTCTGCGGCTCCTGCTGACGGTGCTCTCTGAGGAAAGACACACGAGACGATGGGAATTCTGCTTGATATAATCACCCAGTTAATCACACAAATGATGCGCTAGGTGTCTGTGCAATGGTGTGAGTCATCTTCGCAATAGGTTGCGACGATTCAAAATATTGATTCGttgaaaacaagaattaaaTTGGGAAAACGAAAACAACAGACCAGCTTGACCATCTGTATGCAGAGGCCCTTGTTTTCGTTAGCTGTTCTTGTAACGATTGTTGTCGGCTCATTTGTTTCTCTTTGGATAAAGGCATccgctaaatgcataaatgtaataaatgtaaacatttagtCACTGGCTGGATTTGATAAAAGTGAGGAGTTGTGTTGGAGACTCTTCGTAGCGTCTAAACTAGTAAAGAGTACACATTTTGTACTAATTTCGTCAGTATTGTCTCTGAGACGCTGGTCTACTGTGGGTTCATTGGCTGCACATTACTCTGGGTGGATGTCTTGGATATCTAGTTTACTTGCTAGTAAGGCATTGCTGTAGCTCAGAGAGTAGAGCATGCCATTGGGAGCCAAACCCAAGGTTTTGGGAAACCCAGGAAActcatacaaatatatatcagGGATTCAGTTTAAGTGTCTTTGGACAAAAGTGTCTaccaaatgcatgaatgtaatgTCAAACAGTTCCTGTACCCTGTCCAGCACTGCACAtcctggatgtttttttttaaattattatatggaGCCATCCCAAACGCAGCGCAAAGGCCCGTCCACACCAAGAACAATAAATATAACGGTGAGTTTTAATTCTTTGAAAACAGAGACGTCCGCACCAAAACTGTATCGACTCAAAGAAGCGGTTTTCTTGGAAtcattggaatttttttttttttccgggcGGTGAATGATAAAAACGGCCAACTTTACAGCGGCAGAACACAAAACTGCAATGCACTCGTAGAATCAACGGAACGCCATGATCATCGGTGAAGAACAGGCCTTTAAAATCTTCCTGTCCGAAGGTGCGTTAGGCGAAATCCAGTCCTTTCAAAGGGAAAGGTAAATGACTAGAAACTCACTTTGACCCGTCTCTACACTTTTAATAATAGATCAACGCGATCGCTTTTTAAATTGGAGGTTGGCCAGATTAAGCTCCTCCCCAACTGGATCTGATAGTACCGGACTGGTTTGTGATGGTCTGATCTTGATTCTGGTGAGTTGTGTTAGCGGGTTGTGAATAGATTAAGCTGTCTTTGTATTATTACAGAGAACTTACAACATGTTGCCTCATCTCTCAGCCTTCAAtgctggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgagagcgATAAAGTGTGTGCTTGAGTCTAAGGGCATTTTTCCAGCCTAAGAGGGCTCAAACCAtcagctaacacacacacacacacacattaatgcaTGATGGTTAATTATGGCTGCTTGTGCCAAGACTGGGCTCTACTCCAAACCCCCAGCCACATCATTCCCAATTAAACAGCCCACTTCAATAGACCTCCCGgcatatgtgtgagtgtgtgcgtgaatCCCACCTCCATCGTGCTGCCCGGTTTCTTCTTGAGTTCTTCACACTTTCTGAACTTGCAGATCTGGTGACCCGTCTTTCTGTTTCGACAGGAGCTGCACACGCCGCAGTTAATGAGCCTCCTGCAGGGGGCGCAGACGCCGCAGCGCTTACGCTTGCGCTTAGCCGCTCCGCTACCGTTGCTGCTAGCGCTGCTGCAGCTGCCGTTGGCGTTCCCGTTAAGGGCGGCGGGTGAACCGGAGCAAGACGAGCCGCTGTGCTGGCAGTCCGCCGCCGCGTTGGCGATCTGAAACGCGCTGTCGGACATCGTGACCCCCGACGACCCCGCACCGGAGTGAAGCGTCGTCATGACGATGACCCCAGGGGGGAGCGACAGACCCCCCAACGGGGGCATCCCTCCGAACGTCCCGCCTCGGTCCGTCTCTCCGGGCGGCACGGACGGCGGACACTTCAGGCGGTTCATGCAGTCGGCCCCCGTTACAGGAAGGCCGCGGCATTGCTCCGCGGCCAGTGGCGACAGAAAGTTGTCCGCGCCCATCGGGAGGGCGGAGTCTTGTGGAATGTGTTTGCCGGACATGTGCATGTTCACAGGCTCCGCCCTCGACATGCCAGTCCGATGTGTGTGAGGTCCGTTAACGTTAACCGCAGCAGGCTTTCGCCCCCACAGCATGGCGTTGTCGCAGGGCCAGGGTGGCATCGCCGATAGGCGGGCAGAGGGGAAAAGGGGCGTGGCAATCCGCGCAATTTTGGCGGTCTGGGGAAACGGGGCTGCGCCAGCCGTGCTGTTCTTATAGAATGTGGCAAAAGAGCGGTAGCGCTCCATCTGCGCGCTGTAGTCCAACACGGGATTTACGCACGAGTCGATCTGTAATGGAAAGTCCCGCCCGGGGGTGGGGTTGTAGTTGTGGGTGTGGCCGTGGGCGTGGCCATGAGCGTGTGGGGTTTCCATGCACACACCACTGCTCATGTTCGCCATcagagcaaaacaaacacacactaatgcCCAACCATCCACAGCAGTGGTCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107673165 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275150 True 4447 lncRNA 0.49 2 202042 263099

Neighbor

gene id symbol gene type direction distance location
LOC122334561 cyp17a2,LOC107574436,LOC107750198,LOC107673162 coding upstream 8045 186178 ~ 193997 (+)
wu:fy63c09 LOC107701241 coding upstream 67690 122174 ~ 134352 (+)
LOC122334533 LOC107730023,LOC108435576,LOC108276020,LOC107701242,LOC108249164,LOC107101953 coding upstream 99867 94764 ~ 102175 (+)
ednrab ednrab,LOC107565324,LOC107730027,LOC107570196,LOC108435575 coding upstream 109929 83329 ~ 92113 (+)
LOC122334538 LOC107750194,LOC101884488,LOC107564762,LOC107708036 coding downstream 3182 266281 ~ 274870 (+)
aimp1b NA coding downstream 15295 278394 ~ 285104 (+)
sgms2b LOC107673184,LOC107750186,LOC107702172,LOC107568965,LOC107568955,LOC107737971,LOC107564763 coding downstream 24463 287562 ~ 295235 (+)
LOC122334545 ccdc171 coding downstream 78589 341688 ~ 362034 (+)
LOC122334546 NA coding downstream 98803 361902 ~ 371295 (+)
G185363 NA non-coding upstream 34723 165516 ~ 167319 (+)
G185345 NA non-coding upstream 43845 156944 ~ 158197 (+)
G185352 NA non-coding upstream 63406 137928 ~ 138636 (+)
G185333 NA non-coding upstream 65784 134637 ~ 136258 (+)
trnaq-uug_24 NA non-coding upstream 150208 51763 ~ 51834 (+)
G185432 cfi,LOC107737955,LOC107737970 non-coding downstream 40255 303354 ~ 310514 (+)
G185443 NA non-coding downstream 121438 384537 ~ 385010 (+)
G185446 NA non-coding downstream 144361 407460 ~ 409065 (+)
G185457 NA non-coding downstream 209172 472271 ~ 531021 (+)
G185405 NA non-coding downstream 278530 541629 ~ 544613 (+)
ctc1 ctc1,LOC107580117 other downstream 150646 413745 ~ 427951 (+)
plod3 plod3,LOC107709211,LOC107673154,LOC108414592,LOC107737962,LOC107676175 other downstream 275256 538355 ~ 590185 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 322420 585519 ~ 586595 (+)

Expression


Co-expression Network