CI01000004_00833574_00834659


Basic Information

Item Value
gene id CI01000004_00833574_00834659
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 832330 ~ 835867 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_00833574_00834659.mRNA
ATATTAAGAGGTGAAGTTCAGCTGGAATGTGTAAATGGCTTTTGTGCCAGTGTGTCCTTTAAACGGAGAAAAGTCAGCTGTTAATGCGGTGCTTGAGCAACAGAGGTGGCCGGAGGAATGGCCAAGCTTTAATCAGGGAAACGGATTTGTTTGCTTCCTCCAAGTTATGAACATTTCCACCTTAAAGCTTCCTTTGGGCAAAATAGGAATAAAGCTAAATATTATCAATGTTATTCCACACATACATTATCCAAACGTTTATCCACACGTACGTTATTCAGACGCAAAGTAAAAAATATACTTTCTCAACTACGTCGCCGCCATCGCCACCGCTCACTTTGAGCGCAGCTCCAACAGGTGACCGTGACGTCTAACGTCTCATATCTTACGTCTGACGCCTGAATACTATGGGATTTTGGCCAGACGGCTGGCGTGCGTATACACGTTAGTTCTCCTCTCAGTTTGCTTAGCAATCATCAAATTTTATAGAATCCACCCCCCATACTTCACGAGGGCGCCGGCGCCCTTCCCCCGTCTGCGCGTCCTGAAGCGTCTAAACAACGCCGCCGCTCCACCAACTACAACATTCAACAAAAACGTCTGAATAATAGAAATCCGGTAAAAGATTTTGTGGTGAGTACTGCCGAATGTTCAGCAGTTCATCCCTGGTAAAACTGATCGTATTTGAAAAACAAAAAACAGGAAAAACTAACAAAAACAATACAAACACTGGAGAGCTAAGCACTGTGGCTGCCATGCGCGGCGCCATCAAAATGCAGGATGTGATGATTAATTTTAATTATGTTTAAAGTTTCTGTGTCACAACCTTGATATACAAAGCTGCTAGGCACACCAGAAAAACAAAATGACTGCTGCATTTAATGTGTATGTGAGTAATATGCCCATTTCCTGTTACTCCCAAGCTCAGTTTCCGCTCTTATTGTTGATAGATAGAGAGAAAAAAAAAAAAAAGTGATCTTGTGCTGCTAAGTCCAGGATGTGAACTGTATTCAAATACTTTCCATGCTTATCACTGTTTGTTCTGTGTTTCCAAGAGACTGAGATTTTCCTGAAGAATGAAATGGAAACATTTTATGGGCAAGTATCCTAGAGTGCCGTACTGTGAAAGTACATTCTTAAGTGAAAGGGAACTGTTTTTCTCTCAATAACAAAAATTTGCAACAAAGACTTGGAGCTGATTGCAAACCATGGATGTTTTAAACTCAGAGGACTACAGCAATTATGAGGACTATTATAATGCAGAAGGACTTGAGGAATATGGACTCTGCAAGAAGACACACGTAAAGGAATTCAGCAATGTGTTTTTACCTATATTCTACTACATTATCTGTGCACTGAGCATTATTGCTAATTTAACCCTGCTAATATTGTTCATCAAATACAAAACTTTGAGGAAGGTGTTGCCTCTGCACATGGTCATATCGGATTTTATTTTTACACTGAGCCTTCCGTTCTGGGCAGTGTATGCCAGCAGTGAATGGATCTTTGGTGATCAAAGCTGTAAGGCAATCACATTGGTTTACATGGTCAGTTTGTATAGCAGCAATCTTTTTGTTGCTAGTCAGAGCTTGCAAAGATTTATGGACATTGTATATGTTGTTTCTACCATCAGGATCTTTAACAGTCTAAAGAGGAATACTATTATGTGCATTTTGGTGTGGCTTTTATCAGTTTTGGCTGCTGCTGTTCATGTCAACTTTGTTGAGACTCAAAAGATCCATGAACAGAACATTTGCACTTACAACTTCAACCATAAAGTCGGCTGGAAAATCTATGTAAGATTTCAGATGAACATACTTGGGTTTGTCGTACCATTTTTAGTGCTCCTATTTTGTTCCATCAGACTACCATATGTTGCTGCCGTGAGGAGCACATTCCAGATGTTTAGATATGAAATTGGATTCACTGTCATGTTTTTTCTCCTCTGGTTCCCCTATAGTGTTGTTATTTTCTTGCATGCTTTGCAAGACCTTCATGTTTTTAATTCATGTACCACTAACATACACTTTGACTTTGCTATTCAGGTGACAGAATGTATTGCTTTCATGCATGTTTTCATGAATCCTCTTTTGTATATCTTTTTAAACAAAAAAGTCTGGAAACGATTGAGAAATGCTTGCAAAACTCCAAGGGAGTATCTGCTTGAGGAATCCAACAGTTCATCAAACATGTCAAGTCAGGGTGGTGCTATAGAGCTGAGGTCAGTTCATCAAGTCCATGACCTGAGCTTTTGTGCTGAACGACCTAATAACTTACTACCTGAGGCAATGTAAAAGCTTTATTATGTTTATGATATATGTACATACACAGATCATGCATAACATTATGACCACCTTCTTAATATTGTGTTGGTCCCACTTTTGCTGCCAAAACAGCCCTGACCCATCGAGGAATGGACTCCACTAGACCCCTGAAAGTGTACTGTGGTATCTGGCACCAAGATGTTAGCAGCAGATCGTTTAAGTCCTGTAAGCTGCAAGGTGGAGCCTCCATGGATCGGACTTTCAGCACATTCCACAGATGCCGGATTGAATTGAGATCTGGGGAATTTGGAGGTCAAGTCAACAGCTCAAACTCGTTGTTGTGCTCCTCAAACCATTCCTGAACCATTTTTGCTTTGTGGCAGGGCACATTTTCCTGCTGAAAGAGGCCGCAGCCACCAGGGAATACCGTTTCCATGAAAGGGTGTACAATGTGTGCAACAATGCTTAGGTGATTCATCAGACCAGGCCACCTTCTTCCATTGCTCTGTGGTCCAGTTCTGATGCTCACGCACCCACTGTTGGCGCTTTCGGCAGTGGACAGGGGTCAGCGTGAACACCCTGACTGGTCTGCGGCTATGCAGCCCCATACGCAACAAACTGCGATGCACTGTGTATTCTGACTGCTTTCTTTCAGAACCAGCATTAACTTCTTGAACAATTTAAGCTATAGTAGCTCTTCTGTTGGATCGGACCACACGTGCCAGCCTTCGCTCCCCACATGCATCAATGAGCCTTGGCCACCCATGACCCTGTCGACAGTTCACCACTGTTCCTTCCTTGGATTCCTTCCTTCCTCCAGTGTTATATTTATATATATAAAGGCATATATCAAAACGGACACTGTACAGTTTATATGTTTATATTAGCTTGGTTTTATGTGATTTTTAATAAAAAAATATATATATATTTTAAAGTTAGTTGAGCTTCTCTCCACAAGCAATGGCCGATTCAACAAATATAACACCAAAGTCAATGTAATGTGTGTGTGTGTCTCTCTCTCTCACTCTCTGAGCTTTCTAAACTCTGTGAGGTGGGAGGTAAAATGCTAAAATGCTTATGTGATGACAAGTATTTCTGCAAAAAACTAATGTTGACAATGTAAAAGACACTGTTTTCAACAGATTTTGAGATATGCCGAGTCAGTTCAACCAGTGACCTTTCCACAACATTCTTATCATAAAGATAAGAGTAGCCTTGACCCTTCATGTTTGGGATTAAAAATTACTCTGCTAGAACTTAGAAGCATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_00833574_00834659.mRNA True 3538 mRNA 0.41 1 832330 835867

Neighbor

gene id symbol gene type direction distance location
CI01000004_00812006_00813189 RGS5B coding downstream 19062 811577 ~ 813268 (-)
CI01000004_00794261_00800431 NA coding downstream 31896 794113 ~ 800434 (-)
CI01000004_00756665_00768994 NA coding downstream 63336 756470 ~ 768994 (-)
CI01000004_00728771_00737436 XPR1B, XPR1 coding downstream 94894 728678 ~ 737436 (-)
CI01000004_00670394_00706261 CDC14AA, CDC14A coding downstream 126069 670394 ~ 706261 (-)
CI01000004_00888465_00928759 BRINP3B coding upstream 52406 888273 ~ 929516 (-)
CI01000004_00976733_00985797 NA coding upstream 140548 976415 ~ 987394 (-)
CI01000004_01151429_01155980 NA coding upstream 315042 1150909 ~ 1156040 (-)
CI01000004_01163187_01164466 NA coding upstream 327076 1162943 ~ 1164466 (-)
CI01000004_01199771_01204393 OTOL1A coding upstream 363624 1199491 ~ 1206249 (-)
G24925 NA non-coding downstream 29862 802180 ~ 802468 (-)
G24924 NA non-coding downstream 30273 801801 ~ 802057 (-)
G24923 NA non-coding downstream 30803 801294 ~ 801527 (-)
CI01000004_00634207_00644652 NA non-coding downstream 193674 633848 ~ 646844 (-)
G24752 NA non-coding downstream 202006 630034 ~ 630324 (-)
G24936 NA non-coding upstream 172 836039 ~ 836297 (-)
G24941 NA non-coding upstream 10484 846351 ~ 846630 (-)
G24945 NA non-coding upstream 16933 852800 ~ 853022 (-)
G24983 NA non-coding upstream 137171 973038 ~ 973314 (-)
G24984 NA non-coding upstream 138777 974644 ~ 975610 (-)
CI01000004_01773383_01774888 INSL5B other upstream 937173 1772928 ~ 1774942 (-)
G26788 NA other upstream 2438566 3267683 ~ 3275721 (-)
G27746 NA other upstream 4342360 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 4784516 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 5698960 6538904 ~ 6541252 (-)

Expression


Co-expression Network