G185457


Basic Information

Item Value
gene id G185457
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 472271 ~ 531021 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU275229
TAATGGAGTCAATTAACGTTTATTATCCctgtaaaacaataatgaaagaaattaatgagACACAGGTGAGCAACATAATTAGCAATTACAAtcagaaatgagaaaatgtgcagaaacgataaaatccattaaaacaaaactaaagcaTGTTTAAACAGCATATCAAGGTGCATGTAATTACACGGGATTATAAATGCAGTCATTGTAGATTGATTTCCCAGAACATATGAGTTCACAGATGTAAATGTAGGCGCTAAATAATATGcactaaataaagcaaaaatgacaaaaagcacagtaaatgtaaactgaatcgcataattaaacttaaacatGACAGAAGTTCAAACAGACATGAAAGCTATGTTCACACTGCATGCAGAATTTTTACTTAGATCTGATTTTATTGTATAGCTGTTCACATGATTGTTTTGAACGTGACGAGTTGTTTCTCCGAACTGGTCCAAAACTAGCCCAACCATGTTCAGGGAGGTGAGTGTCCCATTTGTGGGGTCGCGTCAACCCACCAATTGAAAAACAACCCGCGGCAACAGAGGACAAACTAGCCCGATTCTGTGGGGAAAATGTGGATTTGGCAACACCTGCACAATGCGggcaccttattgtaaagtgttaccttcatattaaatagcaatgcaatattttttttattattgcattttacaatGCAACAGAATCAGATATAACTAATTGTCCTAAGCTATTATTATCAGAGCATGTGAGCAGTGTTGCCATGGAGGTTACCGGGCCGTGTCCTCCGTGCCACCAGAGGGCGGTCTCGAGTATTAACCGGTCCACTTCCCATACTGCCTCTTACCTGGGGCTGAATACACACCTGTCCCCTTCGCCACGCCCACTGCTCAATACTTCCCCTATTTAAATGGACTAGTAAGTTCTACCTGTGCGAAGTCTTGATTTGCTACGGTGATCATTTCTGAGGGTTTACCATTGTATTCTCTGCCTTGTTATCGACCCCGGACTGTCTATCTGCTCTCTGGTGGTTCTCTGCCTGCCCCAGACCTTCTGCTCGTCTGTTCTGCTATTTGGATCGTCCTCCTTGCTCCGTTTTGCCGTAGTTTTGTCCCTGTCTGTACGACCAAGCCAATAAACGCTGCATATGGATCCCACTCAGCCTAGCGCCAGCTCTACTACATCGAGTAACAGCACAGGAGCGCTACTGTAAACATGAACAAGTACTAAACATGAGGGGTAGGCTGCTATAAGAGCTGAAGCGCATTCATTGAGCGAAATACTGAGCAGAGAGTCGGACTGcgactaataaaatattacatagcCTATTTTTCGGCTCGTATTTTTGGCGTTTTCTCTCTCGGCGGATAAATTTCAGTGCGtctctaaaaatatatgtacattctgtatatattgtgaaaaaacTGTTAGACATTGACAGCTTGATTGATTGTTATTTGACTCAAACACACAGTTGGTAATTACTTGTACATTTTCGGTCTGTTATTGGTTACAAATGACCAAAAACgaaacttttatttagaaaacatttaaacaaaatgcagatatttttgattatattttagtgCGTAATTTACTGGCATTGTGTGAATATGGAATAAGAAAGTGATGACCCTCTAATTATAGGTATTTTGAAATagtactaaatatttataatttgggATTCCATGTGATCAGTTTCTCTCCAGTGATCACTTGACACAGATGAAGTTGTTTCTGTCAGTTTCAGGGAGGCTGATCCAGAAATTATCGTTGGTCCGAATGGCTCCGGATCTGATCGTATTAACACAGTCGTCCAGTCCGGTGTCGTAATCAAGAGTCCACCGATCGTAGCAGATGGTCTGACCGTTGATCCAGAACCAGATTCCCACGATGCAGGAGTGACGCAGACCCAGCCACACGTGATTGGACGAGGCTCTCGAGGTCACATTCATCACCCGTCGCTGTATCTGCTCCGAATATACCGACACCAGGTccatgtctctgtctctgcagTATCTCAGAGCTTCAGTCCACGTCTTATTCTCTCGGATCAGAACCAGTTTATCTGTAACACAAACAAATCAGCATACAGAACTTGAAGTCTTTACCGTAAATACAGGATCCAGTGCCATGtacttttagaattttttg
>TU275231
ATCATAACACACAAAGGGATGCGGTTCTCTACAGTCCTCGTCTGTCCATCGTCCTTCATTACTGAAACCAGTCGATGCACAGATGCTGTTTCCGTTAGGGATGTTATCAGGTTCATCTTGTTTCCAGTATAAGAATGTGACGGGGCTGTTATCTGACCAAACCCAGAATCTGTACAGACCGATCCAGGATTCTTTAGGAGAAGTTAGGTTCTGCTTTATGATGTTCTGAATCTCTTCATTCTCACTCTGGTTCCTCACACTGACCAGAGCTGTGTGGTACTTTCTGCAGTATTTCTGAGCGTTTGTGAAGTTCTTTAGCTCCTGTACAGGGAC
>TU275232
TAATGGAGTCAATTAACGTTTATTATCCctgtaaaacaataatgaaagaaattaatgagACACAGGTGAGCAACATAATTAGCAATTACAAtcagaaatgagaaaatgtgcagaaacgataaaatccattaaaacaaaactaaagcaTGTTTAAACAGCATATCAAGGTGCATGTAATTACACGGGATTATAAATGCAGTCATTGTAGATTGATTTCCCAGAACATATGAGTTCACAGATGTAAATGTAGGCGCTAAATAATATGcactaaataaagcaaaaatgacaaaaagcacagtaaatgtaaactgaatcgcataattaaacttaaacatGACAGAAGTTCAAACAGACATGAAAGCTATGTTCACACTGCATGCAGAATTTTTACTTAGATCTGATTTTATTGTATAGCTGTTCACATGATTGTTTTGAACGTGACGAGTTGTTTCTCCGAACTGGTCCAAAACTAGCCCAACCATGTTCAGGGAGGTGAGTGTCCCATTTGTGGGGTCGCGTCAACCCACCAATTGAAAAACAACCCGCGGCAACAGAGGACAAACTAGCCCGATTCTGTGGGGAAAATGTGGATTTGGCAACACCTGCACAATGCGggcaccttattgtaaagtgttaccttcatattaaatagcaatgcaatattttttttattattgcattttacaatGCAACAGAATCAGATATAACTAATTGTCCTAAGCTATTATTATCAGAGCATGTGAGCAGTGTTGCCATGGAGGTTACCGGGCCGTGTCCTCCGTGCCACCAGAGGGCGGTCTCGAGTATTAACCGGTCCACTTCCCATACTGCCTCTTACCTGGGGCTGAATACACACCTGTCCCCTTCGCCACGCCCACTGCTCAATACTTCCCCTATTTAAATGGACTAGTAAGTTCTACCTGTGCGAAGTCTTGATTTGCTACGGTGATCATTTCTGAGGGTTTACCATTGTATTCTCTGCCTTGTTATCGACCCCGGACTGTCTATCTGCTCTCTGGTGGTTCTCTGCCTGCCCCAGACCTTCTGCTCGTCTGTTCTGCTATTTGGATCGTCCTCCTTGCTCCGTTTTGCCGTAGTTTTGTCCCTGTCTGTACGACCAAGCCAATAAACGCTGCATATGGATCCCACTCAGCCTAGCGCCAGCTCTACTACATCGAGTAACAGCACAGGAGCGCTACTGTAAACATGAACAAGTACTAAACATGAGGGGTAGGCTGCTATAAGAGCTGAAGCGCATTCATTGAGCGAAATACTGAGCAGAGAGTCGGACTGcgactaataaaatattacatagcCTATTTTTCGGCTCGTATTTTTGGCGTTTTCTCTCTCGGCGGATAAATTTCAGTGCGtctctaaaaatatatgtacattctgtatatattgtgaaaaaacTGTTAGACATTGACAGCTTGATTGATTGTTATTTGACTCAAACACACAGTTGGTAATTACTTtgggtaattactaaaacatttttattgtctgTTATTGGTTACAAATTACATGATTAAGTACTTTTTGATTgctttataattaaatgaatgacttACTGCATTGTGTGAATATGGAATCCATTAAAAAGTAACGGTTCTCTAATTAtaggcattttaaaatgtagtaatcTACTTAGAAGTACTGAATATTTAAGTACTGAATCTCTTTTTCATGTAATCAGTTTCTCTCCAGCGCTCACTTGACACAGATGAAGTTGTTTCTGTCAGTTTCAGGGAGGCTGATCCAGAAATTATCGTTGGTCCGAATGGCTCCGGATCTGATCGTATTAACACAGTCGTCCAGTCCGGTGTCGTAATCAGGAGTCCACCGATCGTAGCAGATGGTCTGACCGTTGATCCAGAACCAGATTCCCACGATGCAGGAGTGACGCAGACCCAGCCACACGTGATTGGACGAGGCTCTCGAGGTCACATCCATCACCCGTCGCTGTATCTGCTCCGAATATACCGACACCAGGTccatgtctctgtctctgcagTATCTCAGAGCTTCAGTCCACGTCTTATTCTCTCTGATCAGAACCAGTTTATCTGGAAAGAAACAAAGTAAAGCATTTAACACAGGAGCTCATAGTaccccataatttactcacccccaagccatcctatgTGTATATAacaatgattaatttaatatccatccatccatctttttcCGCATATTCAGGGCCGGTTCGTGGGGCCAGCAGTCTAAGCAGGGAAGCAGACGTCCCTCTCCCCTCTCTTCCCTCTTctgggggaacaccgaggcgttTCCAGGCCAGCTGAGAGACAGTttctccagcgtgtcctaggtcttccccggggcctcctcctggtgggacatgcccggaacaccttcCATGGGATGTGTCCAGGAGATATCTGGAAAAAATGCCAaggccacctcagctggcctctttcgatgtggaggagcagcaggTGTACTCCGAGCTGTGACCGAGCTCATCTCTGTGGTGCCCAGGCACCCTCCaaaggaaactcattttggcCACGTGCAGTCAGGATCTTGACACAAAGCTCATGAACATAGATGAGAGAAGAAACATAGATTgaccaataaatcaataaatccttCTTTACCACGACAGACCGGTATAGCGACCGCATTagtgcagaagctgcaccgatctgCCTGTCAATCTCTCATTCCATCcctccctcactcgtgaacactACCCCAAGGTACTGacactcctccacctgaggcaggagctcccatCAACCCGAAGGGGGCAAGCCATCCTTTTTCGACTGAAAACCATGACTtcgacttggaggtgctgattctcatcccagccgcttcacactcggATGCAAACCACCCCAGTGCACGCTtgatgcagccaacaggacaacatcatccacaaaaagcagagacgtgatcctgtggtcaccaaaccagaccccctccggcccccagctgcgcctagaaatcctgccCTGCCGGCAATGCAAGCCATGCTCCTGCTCCGATCATAGAGGGACCAGACCGCCCTTAGCAAAGAGCCCTAGACCCAATACTCCCAGAACTCCTCCCAGGACACCATGAGGGACACGGTCGAAtaccttctccaaatccacaaagcacatgtggactggttgggtaAACTCCCATGAACCCTGCAATACCCTGCAGaaggtatagagctggtccagtgtctGGATTAATTAGTTTGCTTTTTTGGTTTGTACCTTGTTTGGATTTATGCTCTTGTTTTTGGATGTACACTTTAGTCTTGCCCCCTTGATTCTGTTTGCTTTCTTGTTCGCTGatgttttgaccctgcctgtatTTCTACAGTACTACAGACGTACAGTCATACTCTGAGATAGTATGATGAGAAAGTTTCTATAGTTTGACATGTaaatgttCAGCAGCTCAGATGATTGATCTACTCACCATCATAACACACAAAGGGATGCGGTTCTCTACAGTACTCGTCTGTCCATTGTCCTTCATTACTGAAACCAGTCGATGCACAGATGCTGTTTCCGTTAGGGATGTTATCAGGTTCATCTTGTTTCCAGTATAAGAATGTGACGGGGCTGTTATCTGACCAAACCCAGAATCTGTACAGACCGATCCAGGATTCTTTAGGAGAAGTTAGGTTCTGCTTTATGATGTTCTGAATCTCTTCATTCTCACTCTGGTTCCTCACACTGACCAGAGCTGTGTGGTACTTTCTGCAGTATTTCTGAGCGTTTGTGAAGTTCTTTAGCTCCTGTACAGGGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275229 False 2145 lncRNA 0.41 2 472271 504022
TU275231 False 333 lncRNA 0.45 2 494068 531021
TU275232 True 3775 lncRNA 0.45 4 472271 531021

Neighbor

gene id symbol gene type direction distance location
tfr2 tfr2,LOC107730361,LOC107673155,LOC107676171,LOC107660828,LOC107709213 coding upstream 8070 451287 ~ 464201 (+)
LOC122334569 NA coding upstream 37346 431117 ~ 434925 (+)
sh3gl2b sh3gl2,LOC108276379 coding upstream 66043 388194 ~ 406228 (+)
si:ch73-168d20.1 LOC107730363,LOC107564766,LOC107673183 coding upstream 84864 371427 ~ 387407 (+)
LOC122334546 NA coding upstream 100976 361902 ~ 371295 (+)
LOC122334567 NA coding downstream 3139 534160 ~ 542013 (+)
G185446 NA non-coding upstream 63206 407460 ~ 409065 (+)
G185443 NA non-coding upstream 87261 384537 ~ 385010 (+)
G185432 cfi,LOC107737955,LOC107737970 non-coding upstream 161757 303354 ~ 310514 (+)
G185407 LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148 non-coding upstream 209172 202042 ~ 263099 (+)
G185363 NA non-coding upstream 304952 165516 ~ 167319 (+)
G185405 NA non-coding downstream 10608 541629 ~ 544613 (+)
LOC122334568 NA non-coding downstream 11308 542329 ~ 545868 (+)
LOC122334532 NA non-coding downstream 51031 582052 ~ 593003 (+)
G185402 NA non-coding downstream 59294 590315 ~ 600124 (+)
ctc1 ctc1,LOC107580117 other upstream 44320 413745 ~ 427951 (+)
plod3 plod3,LOC107709211,LOC107673154,LOC108414592,LOC107737962,LOC107676175 other downstream 7334 538355 ~ 590185 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 54498 585519 ~ 586595 (+)

Expression


Co-expression Network