G185478 (si:ch73-269m23.5,LOC107681649,LOC107567120)



Basic Information


Item Value
gene id G185478
gene name si:ch73-269m23.5,LOC107681649,LOC107567120
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 585519 ~ 586595 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU275262
GAGCTgggaggaagtgacatcatcgGAGAGTGTGCCGGGCAGCACTTCCAGGTGTCCCGCCTCCTGTCGCACCTAAACTCCGCCCTCGGCCCCGCCTCCGACGTGCTTCTGGATCCCTATCTGCTCTGCTGGGAGGAGCTCATCAAGTTCATGGAGGCTCTGGGCCCTTTGGTGGGGTTCTTCACTCATAAAGTTGAGGAGAAGATCACGCTCATCAGACAGCTCGCGATGGAAGAATTCGCCAGACAGAGCGAGACAGCCAATGGCGCGTGGCCCCGCCCCCTCCGCACGCCTACCGCTCCGTGCGCTCCATGCTGGAGGCGGAGCTCCAGAGGGGCGTGGTCTCATTCGACACGCAAACACCTTCCGGTAGTCGAACTTTGCTCCGCCTCCACCGTTCGTTACTATGGCTACAGCTGCTCCTGGAGAAGCTGGGGTCG

Function


NR:

description
PREDICTED: ceramide-1-phosphate transfer protein-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU275262 True 440 TUCP 0.61 2 585519 586595

Neighbor


gene id symbol gene type direction distance location
LOC122334567 NA coding upstream 43506 534160 ~ 542013 (+)
tfr2 tfr2,LOC107730361,LOC107673155,LOC107676171,LOC107660828,LOC107709213 coding upstream 121318 451287 ~ 464201 (+)
LOC122334569 NA coding upstream 150594 431117 ~ 434925 (+)
sh3gl2b sh3gl2,LOC108276379 coding upstream 179291 388194 ~ 406228 (+)
si:ch73-168d20.1 LOC107730363,LOC107564766,LOC107673183 coding upstream 198112 371427 ~ 387407 (+)
LOC122334568 NA non-coding upstream 39651 542329 ~ 545868 (+)
G185405 NA non-coding upstream 40906 541629 ~ 544613 (+)
G185457 NA non-coding upstream 54498 472271 ~ 531021 (+)
G185446 NA non-coding upstream 176454 407460 ~ 409065 (+)
G185443 NA non-coding upstream 200509 384537 ~ 385010 (+)
G185402 NA non-coding downstream 3720 590315 ~ 600124 (+)
ctc1 ctc1,LOC107580117 other upstream 157568 413745 ~ 427951 (+)

Expression



Co-expression Network