CI01000004_00976733_00985797


Basic Information

Item Value
gene id CI01000004_00976733_00985797
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 976415 ~ 987394 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_00976733_00985797.mRNA
AGATTTCTGATGTATAGTGCAAAACTGCAACATCAATAACTACTAGGTTTTTTTTTTTTTTTTTTGTCATGTCTTATCTTGCCTAGGGCACCAAGTGAGCCAGAAATGTATCTGGTACCCCATCAAAATAATAATAATAAAAAAAATAGGTGCATCATGTCCCATGATGCTTCTGACCTCCAATATTGTTTTTAACATCCCCATCCTTCACTAACAGACTCTTTGCTAAGACTGCATTATATTGTGACAGGAAGCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAAGTTTTATTAAAGGGATAGTTCACCCCCCCTCATTTAGGGTTATGAATGTGCATGCAGTTTCAACACATAGATGTGTTTTGGAGAGGCTGTACTAATTTTTGTTATATTGATTGTGTTAGTGGTCACATCGACCCTCACTGGTTTCAGATAAAGAGTCAGATAAAAAACAGAAGTATCTGTGAAAGGATGTTTGTGATTGTTAGTTTTTGGTATCCCAATTGCTAGGCTGCTGCTGCACTAAAAAGAAGTGAAAGAAACCCATTTTACCCTCAAGGGTTTGAGAACCAGACGTAACAAAGGCAGATTGTTGTTTCTTTGTAAAAAGTTGTCACAGAATAAGAATATGTGAATAACTGAATTTTGACAAAAATGTCTGATAGAACCTTATAATTCCAAGGGGGCAATATATAACAGTTCCAGTAAACTGTTACCTGTCTTCTTTGCCATTAGAGGGTGATAGGGAGTCATTAGCTGGGAGAGTAAAAGAAAGGGGGAAGTGTTAGTAAAAATATACCTGTTAGTTGGAAGTGTTTGCTCTCTCCAAGTTTTCATCTGGGAAACACTTGTTGAAGAACATTTATGTTCTACATCTGAATGTGAGTTTATTTATTTGTTTCATTATCCTTATCAGAGGTTTTATAGTGGGAAATGTATTTTGCTTGCAGAACCTCATGTTGTATTGTTTGTTTTGTTTTGTCCAGAGGGTTTTTGTATTTACTTAATTTTGAGGACATCTCATCTGGTTCAAGTTTTTGATTTGTTATTCTCTTCAATTTGGGATTATATCTGAACTCCTTTACAAACTGCCAATTTTCTGTGGATTAACCTTTGTTGGATGAACTTGGATTTAATTCTTTTAACATCATAACATCTACAATGGTGTGATAAACAAAAGACATTTGTGGTAACTCTGGACTTTAATATTGGGTGGACATTTATAAGGTTTTACTTCCAAATGTGAAAAGGTTGATAACTCTGCTTCATGTAATTTTGTCAAGACTTGTGGTGTTCTGAAGGTGTATACTCTTCTGGGACCTTGCTCACCACTCCAACAACTTTCCTGAAGAGTAAAATGAAAGTATGCTTTTTTGAATCATATATAAGCATCAATTTTTCCCCATGTTTTTTTTTTTTTTGTTTTGTTTTTTTTTACCCAAGTGCTTGGTTGCAATTTGTGAAAATATATGAAAAGGTTGTGACCGATAACTACCTCATCTTTTAGTTTAAGACTTGGCTGAGTCTCCTGCATGAGACAACTTTGAGTGTCATCCCAAAATGGATCCAGACTATACTTCTGAATCTGATAAGCTGATAAGCTCATTCAGCAGCCTGTATTTAGAGTCAGAAGGAGGAGCGGCTGTTCCAGAAGAGGACAATGACTCAAGTTGTCTACCACCTCAACAACCACCAGAAGAGGATGAGGAAAGTCTGATCAGTTTTGCTATTGCAACAAAGGGGCAGATGCCAGACTTGACAAAGCTAATGACCACTCAATCATCATTAGACAATGAAAGTTTGAAGAAGCTGGAGGAAAAACTTGATTTCGTAGAAGAAAAGAATAACCACTTAAAGAAAACCTTAGAAAACCAACTGCAAGAGATGGGTAAAGCTGTGATGGATTGCATGAAAAGAAGAGACAGCCATCTCAGGTCTTTGTTTTGTCTTACACCTGGAGCTACCTCTACACCAACTACCACATCAACAACAGATGTACAGATAACTCCCATGTTGCACCAGCTGCCTTATAAAATGGCCATTAAAATAGAATTCCATAAGTTTGGGACCACAGCAGATGAAGACCAAATAGCTTATCTGGAGAAATGTGCAGAATATTTGGCTGTGCAACCCATGAGTAATGCTGAGAGATTAGCAACTCTGCCATCTGTATTGACACATACCACCAAAAATTGTATCAAGCCTTATTTCTTAGACTTAAACCAACGATGTCTGAGAAAGATTCTGCAGGCTGCCTTGAGAAACTGCAATCCTTGTCTTGCTAGTATTTTGAGAGGAACAGTAACTACCTTTGATGACTTGCACAGGACAGCACAGGAGCTTTGGTGGAGCACAGGAGCTTTGGTGGAGCAGGATATTGCTGAGGAAAGGGCCTTCTGGAAGCAACGTCAGGCTGAACAATCCTCCAGAAGAGGAGGCCAGGATAAGTACAGCAGAGGTAAGTCACAGCATGGCATTAGTGACAAGAGGCATCATGCCAACAAAATCAAGTCATTCAAGAACCCAGGCCATGCCCCATGGCGGGTATCACTGGCTGATAAAGGATTTTATCAGCTCCAAGTTCCCAACACTGATTTTTCAGGTCAGGATATCACTAATGATGCCGTCTCCATTCATACACCACTGGAGTATTTCCGAAAGTTTGTGTCAGAAGATATGAACAAAATAGAGGACGCTGCAGACACTGTGGTGGTGCAGGACGTGACCAAATGTCCACACAGGCCTTTCTCATTCTCCCGACGGATGCTACTGTAGTCCTGATTCAAATGACAGTGACAGACCATGTTTTGGTTGCCAAATTGCAACTTTAATTGTCTCTTTCACTGGCTCTTAAAAAAAGACTTGGAGTAGCACTTGCCCTACAGGAAATATCAACTTTTTGAAAATGATTATTAAATACTGGGTTATGATATAGGAGAAAACCGTCTAGGTGTATGCATTAGTGCTTTAAACAAGTCACCTGTTAATGGATGGTACCTTGGCTTGAACAAATACACTGATCTAAAGGACCTGTGACATAAAGAACATCAAAAATCCCAGAATGCACAGCCAAATTTACCCTTCTAGAATAAA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_00976733_00985797.mRNA True 3130 mRNA 0.39 5 976415 987394

Neighbor

gene id symbol gene type direction distance location
CI01000004_00888465_00928759 BRINP3B coding downstream 46899 888273 ~ 929516 (-)
CI01000004_00833574_00834659 NA coding downstream 140548 832330 ~ 835867 (-)
CI01000004_00812006_00813189 RGS5B coding downstream 163147 811577 ~ 813268 (-)
CI01000004_00794261_00800431 NA coding downstream 175981 794113 ~ 800434 (-)
CI01000004_00756665_00768994 NA coding downstream 207421 756470 ~ 768994 (-)
CI01000004_01151429_01155980 NA coding upstream 163515 1150909 ~ 1156040 (-)
CI01000004_01163187_01164466 NA coding upstream 175549 1162943 ~ 1164466 (-)
CI01000004_01199771_01204393 OTOL1A coding upstream 212097 1199491 ~ 1206249 (-)
CI01000004_01230991_01235864 NA coding upstream 243518 1230896 ~ 1235864 (-)
CI01000004_01252844_01260204 NA coding upstream 265258 1252652 ~ 1260354 (-)
G24984 NA non-coding downstream 805 974644 ~ 975610 (-)
G24983 NA non-coding downstream 3101 973038 ~ 973314 (-)
G24945 NA non-coding downstream 123393 852800 ~ 853022 (-)
G24941 NA non-coding downstream 129785 846351 ~ 846630 (-)
G24936 NA non-coding downstream 140118 836039 ~ 836297 (-)
G25001 NA non-coding upstream 32356 1019750 ~ 1019969 (-)
G25009 NA non-coding upstream 58183 1045577 ~ 1045933 (-)
G25012 NA non-coding upstream 60347 1047741 ~ 1048023 (-)
G25018 NA non-coding upstream 66348 1053742 ~ 1053985 (-)
G25019 NA non-coding upstream 70286 1057680 ~ 1057909 (-)
CI01000004_01773383_01774888 INSL5B other upstream 785646 1772928 ~ 1774942 (-)
G26788 NA other upstream 2287039 3267683 ~ 3275721 (-)
G27746 NA other upstream 4190833 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 4632989 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 5547433 6538904 ~ 6541252 (-)

Expression


Co-expression Network