wu:fy63c09 (LOC107701241)


Basic Information

Item Value
gene id wu:fy63c09
gene name LOC107701241
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 122174 ~ 134352 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043232530.1
GTCCGTGCGTCCCGACGACAGACACCGATCCCGTACTTCTCCGGGCGTTTGGAAAAAACCCGAAACTGTCTCACATGACAACATCCCGGACCCGACCGTGAGGAGAGACGATTAAAAGACGGACCGCGCTCGGAGCGCCTTTCCCGAGCTCCTCCGAAGGGGAATGCCGTGCCCGTCGGCCGCCTCGGTGCTTTAGACGGTAAATAAACCGTCTTTCTCTCGGTATGGCGGAGGCACGCgcggaggaggacgaggagcgTTTGCGCGAGCCCGGCGGCGCGAGACGGAGCGCAGaGCATTCAGACAGAAACAAACCCGACCAGCGTCACTCCAGCCAAGGGCCGCTGTCCTCCATCAGAGCCGTCATCAAGCGCACATCGGCGAGAACGAGCGCTCAGAGCGACCATCAGCGAGAACGCAGGCGTCCAGAAATCACCATCCTCTCCGCCGAGCCGCTGCCGTCTAATACCTGGTTCCCAGGGGCTTCCGGCGCGTTTCCTCCAGCCCCGCCCCCGGCCCCGCCCACGTGGGCTGCAGGCTCTGCGACGGTGCAGCTCCCGCCCCCCTCCTACGAGCAGGTGATCCGGGAAAAGAGCCGCGAGCAGAATCTCCGGTCCTCGTCTTCTACGTCTACGTCTCCGTCTCCGTCTTCTTGTCACTCTACCTCCACCATCGCCACGCAGACGGACACAAACTCCTCTGGCCCACAGTCCTCTGCTTCTCGTCCGGTTCGTAGGCCCCCCAAACCCCCGCGGCCCTCGCTGCccctcaaacacacacctgaagTGGACCGGTCGAATCCGAACACCAGTGCTCAGCGCGAACAGTGCGGCGTCCAGACGGACTTTGACGACATCATTGACGACATCTTCGATGACATCTCTCCCATAGGCCCCGCCCCCGGAGCCATCGGTTCCACCCAGATCAACCTCGATTCCCCAGGGGACCCGATGAAAGAGGAGCCCAGCGTTCGCCCCAGACCTCGGCCCCGTTCCAGAGTCGCCCTGCGACCCGCCGAGGACGTTGCGGACCAGCAGATGATGCAGGAGGTCAAAGTTCAGACTCTGGTGCGTCTGAAGGACGATGGGGCCCAGAATGCGTTCGCCGGCTTCGGCGACGCTCCGTCCAACATCTCCAGCAAATACCTGCAAGACCTGCTGGAGGTGTTTGGTTCGGATGAAACGAATGTCCAGCGCGGGGAAAGTCAACAGAGGGATGCAGGAACTGTACTAGAAGAGGAAACCGCGGCCATTATGACACCTATACCGGCAGAACCGTTAAATAGACCCAAACCGCGACCTAGAACTCAGAAATCCATGCCCCAGCTCACCTCAAAACCATCTGTCTTTGAGGTTTTTGATACCAGAGAACCTAGCGGTGAGCAGAACCCCTCCAAACCACCGAGTCCACCAGTGCCAGCACCCAGACCCCTTCTAAACAAACTCCAAAGTCCGCAGAGTCCAGATCTTCTCCGCCAGGACCGGCCTGACAGCGCTCCTCCAGAGCAGCAGGTGGCAGCGCAGGTCTCTGCTCCACCCGAGAGGAGAAACTCAGATGATCAAACTACTAACACTCGAGTGAAGACGCCACCAGTGACTGACCGGAGCGTTGGAAAACGTCTGTCGGCCCCCAAACACTCCCGTCCTCCTCCACCTGTGCTCAGGAAGACGCTGTCCAGCTCACAGGTCGCGGTGGATGTTTCCGGAAACTCCTCCGTTCCTTCTCTTCCTCCGAGACCCAGTGGTGGCAGACTCCTCCCACTCCGCCCTCCTCCAATCAAAGTGACCAAACGTCcaggctcctcctcctcccctgcCGCGACCAATCAGCTGCCAGGCAGCAGGGTGCCGAAGAGAGGCCCGCCCCTCCCGCCCCGCCCCGGACCAGGACACCCGCTCTACCAGCGCTATTCTAGCAAAGAGCTGGAGAACACCAGCAAAGACCAAGAGGAACCACCTGAGGAAACATCTTCACTTGAAGAAGAGCACCTGATTGTCCTGGAAGACGCAGACGTCCCACAAACGCTGTCAAACACACTCCAGGACCTCTGCTCCTCAggagaggtcaaaggtcaagacGTGACTGTCCGTGAGCTTCTCCTGGACGAAGAGCCCTCGGAGCAACCGATCCAACAAGACACACAGAACAGGAGCGTCGTGGCCCGCTTCACGTTCGAGGGGGAGGAGGGGGAGCTGTCCTTCACTGACGGTGATGTCATCACTCTGACGGAATATGTAAATGAGGAGTGGGGGCGTGGCCTCCTGAACGGACGGACGGGAGCCTTCCCTCTCAGCTTCATCCAGGCCGTGGAGGAGAGCGAACCGTTGCCAAGGAAACCGACTCCGGAATGTCCGCGGCCCCCGCAGGAGCCGGAGTCAGAGGACGAGCACTTTATGACTTTACTCCCGCGTGTGAGGACGAGCTCTGTCTGAAGgcAGGAGATGCGGTGTGTGATTTGGAGGACATGGATGCTGAGTGGTTTCTTGGAGAATCCGGTGGGAAACGGGCATTGTCCCTAAAAACTACATCCAAGTGCTGCTGGACCCCTGAACACGGGCTGTCCCGTCATGTGCCTGATGAGTGTTTCTGCATTTGCCTTACTTAGATGTAATACAGTTAAATGAGGTTAGTGAGGGGATGTCCTGTACTGtactgacgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcggcCAGATGAACTTGTTTACACTTTTAACCCACATTAAACTGATCAGTTATGTAAA

Function

NR:

description
PREDICTED: SH3 domain-containing protein 19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043232530.1 True 2743 mRNA 0.59 17 122174 134352

Neighbor

gene id symbol gene type direction distance location
LOC122334533 LOC107730023,LOC108435576,LOC108276020,LOC107701242,LOC108249164,LOC107101953 coding upstream 19999 94764 ~ 102175 (+)
ednrab ednrab,LOC107565324,LOC107730027,LOC107570196,LOC108435575 coding upstream 30061 83329 ~ 92113 (+)
LOC122334561 cyp17a2,LOC107574436,LOC107750198,LOC107673162 coding downstream 51826 186178 ~ 193997 (+)
LOC122334540 LOC108275604,LOC102207396,LOC108413728,LOC107570188,LOC107702147,LOC102785773,LOC107737977 coding downstream 85599 219951 ~ 234238 (+)
toporsb LOC107750189,LOC107673181,LOC107575337,LOC107702170,LOC107737957 coding downstream 102909 237261 ~ 245179 (+)
ddx58 ddx58 coding downstream 110941 245293 ~ 257813 (+)
LOC122334538 LOC107750194,LOC101884488,LOC107564762,LOC107708036 coding downstream 131929 266281 ~ 274870 (+)
trnaq-uug_24 NA non-coding upstream 70340 51763 ~ 51834 (+)
LOC122334578 NA non-coding upstream 72386 49034 ~ 49788 (+)
G185324 NA non-coding upstream 73430 48227 ~ 48744 (+)
G185321 NA non-coding upstream 75811 45987 ~ 46363 (+)
G185318 NA non-coding upstream 77105 44279 ~ 45069 (+)
G185333 NA non-coding downstream 285 134637 ~ 136258 (+)
G185352 NA non-coding downstream 3576 137928 ~ 138636 (+)
G185345 NA non-coding downstream 22592 156944 ~ 158197 (+)
G185363 NA non-coding downstream 31164 165516 ~ 167319 (+)
G185407 LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148 non-coding downstream 67690 202042 ~ 263099 (+)
ctc1 ctc1,LOC107580117 other downstream 279393 413745 ~ 427951 (+)
plod3 plod3,LOC107709211,LOC107673154,LOC108414592,LOC107737962,LOC107676175 other downstream 404003 538355 ~ 590185 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 451167 585519 ~ 586595 (+)

Expression


Co-expression Network