aimp1b


Basic Information

Item Value
gene id aimp1b
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 278394 ~ 285104 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043232552.1
AGAATATGATCCTACACATGTGCCCATGTGCCTCGACATTTTACATCAGGAATGCTGACAGaccgaaacacacacacacacacacacacacttcagtgcTTTCCTTCTGGTCCGGAGCGCCGCtgaaacacagaacacacactctCGCGGAACAGGTGCAGATGTCTGCAAACAGACCTCATGGATCCAGATCAGATCCTCAGGATCAGGAGATGATGCAGTATTTCACACAGCAGGTCCTGTTCTTCAAGGAGAAAGCCAtGCTGCAGGCCTCTGTGAGGGAAGAGAAGAAACTGCTGGTAGAAAATGCCAAACTGAAGAAAGACATCGATGACCTGAAGAAGCTCCTGCAGGACACACAGAAGAGGAAAGCAGTAAAGCTGCATCAGGAGAGAGCTCTGACGGCTGTGATCGCGTCCAAGTCGGCTCTGCTGGGAGAAACGGCTCCTCCGTCTCAGACGAGCACCGCTCACGCTCGACCTGACGCCAGAcgcaggagagagagagcaggtctgaGCGCTTCGGAGTCGGCGTGCGCTCTCATGAGAGATCAGAAACCTGACGTGACCCGTCTGGACCTGCGGGTCGCTCGGGTCCTGGACGTCCGCAAGCACCCGGAATCAGCGTCACTGAGCGTCCAGGAGGTGGAGCTGGGAGAACCCGCCCCCAGAACCGTGGTCAGCGAGCTGACCAATCACTCGCTTCCAGAGCAGcTGGTGGGCTGTCTGGTGGTGGTCTTGTGTAATGTGCGTCCAGTGAAGGTCCGAGGCGTTCAGTCGCAGGCCCGCCTCCTCTGCGCTGTCAGTCAAGAGAGAATGGAGCCCTTGACTCCGCCCACGGCCGCTCAGCCTGGAGACAGAGTCACTTTCCAGAGTTACCCCGGTGAACCCGAGAGAGAGCTGAACCCCAAACAGAGGATCTGGGAGCGATTACAGCCCGACCTGAGCACAGACGCCAAGGGCGTGGCCAAGTACAAGGGCGTGGCCTTCGAGGTCCGCGGGAAGGGCCTCTGCCGGGCCCCGAGCATCAGCAACGGAGCCATCAGATAACACGCGCGCTTCAGCGACGAGAGACTCCGCCATCtcacaaataaatcattgaaaaaCTA
>XM_043232553.1
CACATGTGCCCATGTGCCTCGACATTTTACATCAGGAATGCTGACAGaccgaaacacacacacacacacacacacacttcagtgcTTTCCTTCTGGTCCGGAGCGCCGCtgaaacacagaacacacactctCGCGGAACAGtcTGTGGGGGTGGAGGGCTGTAGGCAGCTGCTGAGCTCTCTCTGATAACTCCAGGACCAGACCGTGTCAGGAGTATTTATGAATGAACCGTCTCTGTCTCAGGTGCAGATGTCTGCAAACAGACCTCATGGATCCAGATCAGATCCTCAGGATCAGGAGATGATGCAGTATTTCACACAGCAGGTCCTGTTCTTCAAGGAGAAAGCCAtGCTGCAGGCCTCTGTGAGGGAAGAGAAGAAACTGCTGGTAGAAAATGCCAAACTGAAGAAAGACATCGATGACCTGAAGAAGCTCCTGCAGGACACACAGAAGAGGAAAGCAGTAAAGCTGCATCAGGAGAGAGCTCTGACGGCTGTGATCGCGTCCAAGTCGGCTCTGCTGGGAGAAACGGCTCCTCCGTCTCAGACGAGCACCGCTCACGCTCGACCTGACGCCAGAcgcaggagagagagagcaggtctgaGCGCTTCGGAGTCGGCGTGCGCTCTCATGAGAGATCAGAAACCTGACGTGACCCGTCTGGACCTGCGGGTCGCTCGGGTCCTGGACGTCCGCAAGCACCCGGAATCAGCGTCACTGAGCGTCCAGGAGGTGGAGCTGGGAGAACCCGCCCCCAGAACCGTGGTCAGCGAGCTGACCAATCACTCGCTTCCAGAGCAGcTGGTGGGCTGTCTGGTGGTGGTCTTGTGTAATGTGCGTCCAGTGAAGGTCCGAGGCGTTCAGTCGCAGGCCCGCCTCCTCTGCGCTGTCAGTCAAGAGAGAATGGAGCCCTTGACTCCGCCCACGGCCGCTCAGCCTGGAGACAGAGTCACTTTCCAGAGTTACCCCGGTGAACCCGAGAGAGAGCTGAACCCCAAACAGAGGATCTGGGAGCGATTACAGCCCGACCTGAGCACAGACGCCAAGGGCGTGGCCAAGTACAAGGGCGTGGCCTTCGAGGTCCGCGGGAAGGGCCTCTGCCGGGCCCCGAGCATCAGCAACGGAGCCATCAGATAACACGCGCGCTTCAGCGACGAGAGACTCCGCCATCtcacaaataaatcattgaaaaaCTA

Function

GO:

id name namespace
GO:0000049 tRNA binding molecular_function
GO:0016874 ligase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043232552.1 False 1108 mRNA 0.57 7 278394 285104
XM_043232553.1 True 1196 mRNA 0.57 7 278408 285104

Neighbor

gene id symbol gene type direction distance location
LOC122334538 LOC107750194,LOC101884488,LOC107564762,LOC107708036 coding upstream 3524 266281 ~ 274870 (+)
ddx58 ddx58 coding upstream 20581 245293 ~ 257813 (+)
toporsb LOC107750189,LOC107673181,LOC107575337,LOC107702170,LOC107737957 coding upstream 33215 237261 ~ 245179 (+)
LOC122334540 LOC108275604,LOC102207396,LOC108413728,LOC107570188,LOC107702147,LOC102785773,LOC107737977 coding upstream 44156 219951 ~ 234238 (+)
LOC122334561 cyp17a2,LOC107574436,LOC107750198,LOC107673162 coding upstream 84397 186178 ~ 193997 (+)
sgms2b LOC107673184,LOC107750186,LOC107702172,LOC107568965,LOC107568955,LOC107737971,LOC107564763 coding downstream 2458 287562 ~ 295235 (+)
LOC122334545 ccdc171 coding downstream 56584 341688 ~ 362034 (+)
LOC122334546 NA coding downstream 76798 361902 ~ 371295 (+)
si:ch73-168d20.1 LOC107730363,LOC107564766,LOC107673183 coding downstream 86323 371427 ~ 387407 (+)
sh3gl2b sh3gl2,LOC108276379 coding downstream 103090 388194 ~ 406228 (+)
G185407 LOC107673165,LOC107750190,LOC100330136,LOC107568966,LOC107702148 non-coding upstream 15295 202042 ~ 263099 (+)
G185363 NA non-coding upstream 111075 165516 ~ 167319 (+)
G185345 NA non-coding upstream 120197 156944 ~ 158197 (+)
G185352 NA non-coding upstream 139758 137928 ~ 138636 (+)
G185333 NA non-coding upstream 142136 134637 ~ 136258 (+)
G185432 cfi,LOC107737955,LOC107737970 non-coding downstream 18250 303354 ~ 310514 (+)
G185443 NA non-coding downstream 99433 384537 ~ 385010 (+)
G185446 NA non-coding downstream 122356 407460 ~ 409065 (+)
G185457 NA non-coding downstream 187167 472271 ~ 531021 (+)
G185405 NA non-coding downstream 256525 541629 ~ 544613 (+)
ctc1 ctc1,LOC107580117 other downstream 128641 413745 ~ 427951 (+)
plod3 plod3,LOC107709211,LOC107673154,LOC108414592,LOC107737962,LOC107676175 other downstream 253251 538355 ~ 590185 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 300415 585519 ~ 586595 (+)

Expression


Co-expression Network