LOC122334578


Basic Information

Item Value
gene id LOC122334578
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048207.1
NCBI id JAEQBD010000552.1
chromosome length 615743
location 49034 ~ 49788 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006248768.1
aaagatggatggatgttaGACGATGATGCATAGAAAGATGGAAGAAATATGtctggatggatgaatagatggatgcatggaaagatggatggattaaTGGATGATAGATGATTGAAAGATGAAAGACGGCTTATTGCTCTCATGTTGAGTTTCTGTTAATGATAtgcttggtgtgtgtgtgtgtgTTGTTAATCCATCTTAATCAGTGGTCTAGGAAACAGTAATTAGGTAAATGTTGAGATTAAGGAGGATAATGAGGATCTGGACTAAAGTTAGACATCagctgatgacacacacacacacacacacctcttcgTCTGTGTGTTGTGTCAGATGTGAAGATCATTAGTCAACGTCACACATGACCCCAGAAGAGATGAACTCTTATGCGTCACGTTCAAGTGCTCTGACCTCAGAACCAAACATCCCAGGTCCGGAGCGTCTGCTAGCGACAGCAGGGTGTTGGGTTCCAGCCCTGAACGCAGCGCGACTTCTTTTGAGTCAATCCGCCAGATGCACCGTGTGAACGAAGCAAAATGTTTTCGTTTTCCAGTAAACATTTTAGCATTGTTCGTGCAAACAGATGTTGCTTTTTATTCATGCCATTATTTCTGgatattttaaaagccattttctctcattaaaatgtttgtgtatttttgcaaGGTTAAAAGTGGACAGAAAATAAcattcagttcattaaaaaaaacctccaaaaagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006248768.1 True 722 lncRNA 0.40 2 49034 49788

Neighbor

gene id symbol gene type direction distance location
ednrab ednrab,LOC107565324,LOC107730027,LOC107570196,LOC108435575 coding downstream 33541 83329 ~ 92113 (+)
LOC122334533 LOC107730023,LOC108435576,LOC108276020,LOC107701242,LOC108249164,LOC107101953 coding downstream 44976 94764 ~ 102175 (+)
wu:fy63c09 LOC107701241 coding downstream 72386 122174 ~ 134352 (+)
LOC122334561 cyp17a2,LOC107574436,LOC107750198,LOC107673162 coding downstream 136390 186178 ~ 193997 (+)
LOC122334540 LOC108275604,LOC102207396,LOC108413728,LOC107570188,LOC107702147,LOC102785773,LOC107737977 coding downstream 170163 219951 ~ 234238 (+)
G185324 NA non-coding upstream 290 48227 ~ 48744 (+)
G185321 NA non-coding upstream 2671 45987 ~ 46363 (+)
G185318 NA non-coding upstream 3965 44279 ~ 45069 (+)
trnaq-uug_24 NA non-coding downstream 1975 51763 ~ 51834 (+)
G185333 NA non-coding downstream 84849 134637 ~ 136258 (+)
G185352 NA non-coding downstream 88140 137928 ~ 138636 (+)
G185345 NA non-coding downstream 107156 156944 ~ 158197 (+)
G185363 NA non-coding downstream 115728 165516 ~ 167319 (+)
ctc1 ctc1,LOC107580117 other downstream 363957 413745 ~ 427951 (+)
plod3 plod3,LOC107709211,LOC107673154,LOC108414592,LOC107737962,LOC107676175 other downstream 488567 538355 ~ 590185 (+)
G185478 si:ch73-269m23.5,LOC107681649,LOC107567120 other downstream 535731 585519 ~ 586595 (+)

Expression


Co-expression Network