CI01000004_01554696_01564701


Basic Information

Item Value
gene id CI01000004_01554696_01564701
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1554656 ~ 1564701 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01554696_01564701.mRNA
ATCTCTATCGATAAAGTAGACCGGTGGGACAGATGGAAGTGCTTGATTCTGTTTGATTCAACACATCAGAGTAACAGAAATGTATCTTGGTCCTCAGGTGCGAATGGCATTTCTCCAAAAGAGAATGGGAGCCAAAGAAGACCACCCTCCTATTCTGTGGAGACACCCTATGGATTCCATCTGGACCTGGACTTCCTCAAATATGTGGATGACATTGAGAAGGGCAACACCATTAGGAGGGTGCCAATGCAGCGAAGGCAAAGAGGGCGAAATAACGGTGCCCTGTCACGTAACTTAAGCCTTCCGGGTTATGGGTGCAGAGCTACAGAGTGGAGCTCCATCAGTACTTTATGGCCCAAAACCAAACTAGGAGACTCTCAACAACATTTTGAGTTTCGATCTAGTGACAGTGTGTCTGCTGGATATGTCAGGAGGGGAGAACCAATCTACAAGTCCTTCACATCTGCAGAGATGGATGCTAATATTCAGGCTTTTGATGAGCAGCCTTTAGGACATTATGTCAGGCCAAATCTTTTGAGAGCCTCCAGTTTACCCTTGACTGTTTTACTAAGAAAACACTCTGAGTCAACCGATGATCCAACCAGCCCCAGCAGCCCCAAGGAATATCTAATGCAGGAAAATGGTTCCTCTGAGGATGTATTCCATGCATCCAACAGCAGGATAGGTAGGACAAACGGGACCCTCCAGCGGCTCACTGCAGCACTTGAACGAGTTGGGGAATTGGAAGAGGAGATCAGGGTCATTCCTGAGCTCAAGGCTCAGATATGTATTTTGCAGGAGGAGCAAAATAGGCTTTTACTCCAGTTACATACCCAAAACAAAACCACTGGGCCGCTGAATGTTCCTACTGAAAATCAAGACAAAGCAAGCGATGACTGGATGAATCGAGAATATGACCGGCTTGAGGAAAATGTCAAGGCTTCTTCTGAACAAGTTGAAGCAGTTGCAATGCCTTCAACTAGAATTCTTCCAGAGATAGAAAGACGTAAGATGGTCTCACGAGAAAAAGATCTCTTGGGTAATGGAGACAAAACCAAGTCTCTCACTGAAACTCTCCAGAGGAAAGTTGTTTTGTTGGAACAGAAACTTCATGAACTGCAGGTAGAACTGGATAAGACAAGAACTCTGTTGAAGCAGCAAGTAGAGGAGAGTCATCTCAAGGATGAGAAGATCAAGCAGTTGACTATGCAGCCTGTAATAGGGCACACACTGGCCAGGGCAATTTCACCTGAAAGCTCCTTAGTAAGTACACAAAATCTTGAACCTGTAGTAGAATTGCAGGAACCACTAATAAGTGAGCAAGAGATGCCAACAGACGAGGGAATCGCCCCTCAAGGTCTGGATAAAACTCCAGTATCACATGCAGACATGGAGCACCATGTGAAAAAATTGCAAGAGCTCCTTCAGGAGCAGTGGGAATGCCTTTGCAAAGGCGACTCATCAGGAAAAATGTCTTCCGATCACTTGCCTCAAAGGGTCTGCACCATTCAAAAGCAGTTAACAACTTTAGTCACCCTTCTAACCCTCTATGTGCTTCCTGCTGGTGATGTTTCTCAAACAGACTATAAAAGGCAGGGAATTCTTCCTGTAGTGGAAAAGAACCCAAAGACAGAACATTTGAAGGAGGTCAGCCCAAGAGACAGTGTGGAGACAGAGGGAGTAAGTAATGCTATCAAACTACAAGAGCATACAGAAGTGGATGCTGACCTCAAGAAGAATACGACAAAGGAAGAAGGCAAACTATGGACCACATGGACAATGGACTCCAGTGTACAGACAAGTAAAAGTAAAAACACAGAATTCAATCCAAAAGAAGATGTCAAAGATGTAGAGACCACAAAACAAGAAGATCTGCACAAGCAAATGAGTCAGGGAAGAGCTCTAGAGGATCAGACAGAGGAGGAGAGGAAGGATCACGTTTGTTTGAGAGTGGACTCGGATCAGAAATCCCTGGTAAACAGGGAAGCTGTTAATAAAGATTTCATAGAGGCATGTTGTTTCCTTAAAGACCATATGGATAAAGTGTCAGAACCTGATGATGAAACGAGTCAGGCTCTCACTGTTGTGTTCCAGCAATGGTTTCATGTCTCTGCTGAAGAGGGGGCATGTGCCGACATTGTTGATTTGTATCTCAGTGAGGTTAACTCACGAACACCTACAGTCCTTCAGTTCTTGGTCAACATGGTGGATGATAATGGGAACACCGCCCTGCATTATAGCGTGTCTCATTGTAACTTCAGCATCGTTAAGCTCCTATTAGACACAGGTGTATGTGAAGTGGACCTGAGAAACAAGTCTGGCTACACCGCTATCATGCTGGCCTCCTTGACAGCTGTAGAATCACCAGGGGACATGAAAGTGGTCCAGCAGCTGATGGAGCTTGGTGATGTCAACGCCTGTGTTGGCCAGGTGGGACAAACAGCCCTTCACTTGGCAGTAAGACATGGACGTGTCCCAATTGTGCATCTCCTGCTAGAACAGGGAGCGGATCCTAATGCCCAGGATCATGCAGGAACCACTCCACTGATCAGCGCCTGTGATCGGGGACACGTCAACATTGTGCGAATTTTGTTGGAGAAAGCAAACTGCAATGTCAATTTAAAAGACAAGGCTGGTCGCAGTGCATTATCTCTGGCAACACAAGCCTCTCATACAGAGATAGCGGACCTTCTGAAAGCCCGCGCAGAAACCAAGAGCTCAGACAAATGTAAGGTGTCTTAGAATGGAGCGTGGATATAGCAGTCATTTATACTTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01554696_01564701.mRNA True 2782 mRNA 0.46 10 1554656 1564701

Neighbor

gene id symbol gene type direction distance location
CI01000004_01440447_01443088 NA coding downstream 111364 1439771 ~ 1443292 (-)
CI01000004_01404265_01425424 NA coding downstream 129232 1404265 ~ 1425424 (-)
CI01000004_01394018_01397517 TMEM125B coding downstream 157139 1393969 ~ 1397517 (-)
CI01000004_01352499_01377500 SLC1A7A, SLC1A7 coding downstream 177141 1352073 ~ 1377515 (-)
CI01000004_01311508_01319203 ALDH9A1B, ALDH9A1 coding downstream 235453 1311055 ~ 1319203 (-)
CI01000004_01605140_01622364 NA coding upstream 39851 1604552 ~ 1622364 (-)
CI01000004_01626984_01627238 NA coding upstream 61515 1626216 ~ 1627238 (-)
CI01000004_01758554_01762415 NA coding upstream 193721 1758422 ~ 1762415 (-)
CI01000004_01773383_01774888 INSL5B coding upstream 208227 1772928 ~ 1774942 (-)
CI01000004_01814534_01821755 CMPK1, CMPK coding upstream 249081 1813782 ~ 1821755 (-)
G25561 NA non-coding downstream 1784 1547751 ~ 1552872 (-)
G25572 NA non-coding downstream 104729 1449135 ~ 1449927 (-)
G25511 NA non-coding downstream 119319 1431847 ~ 1435337 (-)
G25515 NA non-coding downstream 126779 1426692 ~ 1427877 (-)
G25527 NA non-coding downstream 220667 1332563 ~ 1333989 (-)
G25601 NA non-coding upstream 10178 1574879 ~ 1575219 (-)
G25602 NA non-coding upstream 10567 1575268 ~ 1575565 (-)
G25603 NA non-coding upstream 11565 1576266 ~ 1576550 (-)
G25606 NA non-coding upstream 20570 1585271 ~ 1585549 (-)
G25609 NA non-coding upstream 22854 1587555 ~ 1588215 (-)
G26788 NA other upstream 1709732 3267683 ~ 3275721 (-)
G27746 NA other upstream 3613526 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 4055682 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 4970126 6538904 ~ 6541252 (-)

Expression


Co-expression Network