CI01000004_01605140_01622364


Basic Information

Item Value
gene id CI01000004_01605140_01622364
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1604552 ~ 1622364 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01605140_01622364.mRNA
ATGGCCTCAGTGATATTACAAGGGCTCGAGATCCATTTTTACCTGCCAGAGACACACCAGATTATTCATCTCTCGGGAACTTTCACAGCAGAGGAACTGTGTGTTGAAGCTGCCAAGAAGTTGGGTATATCTCCTCTGTGTAGCAGTTTGTTTGCCCTGTATGATGAATATAGCAAGGTCTGGTATCCACCCAATCACTCCTTCAACATTGATGAGACAACAAGACTGAAGCTTTTCTATCGTATGAGGTTTTATTTTACAAACTGGCATGGGAGCAGCAAGACATCTCTTCCAGTGTGCAGATACTCTCTCAAACGAGGGACAGGGTCTACGGGCGCAGCTGTGCTGGATGTAGCTTCACTAACGTACCTCTACGCACAGAGTCAGAGTGACTTTCAGAGCGGTCTGGCACCGCTGCGTAGGACTCGTGATGAGAATGACATCCAGCAGATAGAAAATGAGTGTTTGGGTATGGCTGTGATGGCCATCTCCCATGATGCCATTGAAAAAAATCTTCCTGTTGGTGAATTTGAGTACAAGAATTACATCCCCTGGGTCCTACAAGAGTCCATACGTCACAGGAACATTCTCACACGTTTACGCATATCCAACGTCTTTAAAGTGTTCCTTGAGGAATTCACCAGGAATACTGTGCAAGGCAACAAGATCAGTACGCATGACCTGAAGGTCAAATATATGTCCACTTTAGAGACTCTAACGAAACACTTCGGCCAGGAGGTGTTTAAACCCTCTTCCCTTATCATACATGAGAATGAGCAAATGCTCACAGACTCCAGCTGTGCTGCTGATGTTGACTACAAGATCCTGGTGTCTGGCACCACTGGCATTCATTGGTGTAAAGTCCCCTCTGCGACCTGTTCAGACCTGTGTACCAACCAGGAGAGACGTGAATCAAAGAGGGACAGTAAGAAACAAAAGAAGCCTAAGAGTAAAGAAGCATCATATGATCCAGGAGGGGAAAGATGGACACTCTTTTCAGACTTTAATGAGATAACGCATCTTGTCATCAAATTCTCCATTGTTACCATCCACAAACAGGACAACAAAAGCATGGAGCTGATGTTGGCGACCCATGAGGAAGCGCTGTCCTTTGCCAGTCTTGTAGATGGATATTTTAGGCTCACAGTAGATGCACATCATTTCCTCTGCAGGGATGTGGCTCCTGTCTCATTGGAAATTAACCTACGAGAGGGCTGCCATGGTCCAATCAGTACTGAATATGCCATCCATAAACTCAAGCAGGAAGGTTATGAGGAGGGCATGTACCTGCTGCGCTGGAGCACTCATGACTACGATCAAATTTTCCTGACTGTCATATGCAATGAGAGGGATTGTCATGGCGGCATCACCAAATCCTTCAAGAACTTCCAGATTGAAGTGTGCGCACAGGGCTACCTCCTGACTGGGACAGATATTGTGAAACCCACTCTGAGGGAGCTGACGGACCACCTATCTGGCCAGTGTCTCACAACAGACCACACCAGCTTAAGACTTGAGCGTGGCTGCCCACCCCAGCCAAAAGAGCAATCCAACCTCGTCATGATAACCAGAAAAGATTCAGAATCATCACGCTCTTCCTACAGTCATCCTACAATCTTCCATAAGATCCTCAAAGAGGATATTACCCAGGAGAAACACCTGGGTCAAGGCACTCACACAAACATCTATTCTGGGAAGCTGAAGCTGAGAAATGAGGATGATGAAGGTTTTCCAGGCCATGAGGTGGTGGATGTGGTTCTGAAGGTTCTGGGAGCAGGACACAATTACATTTCTGCCTTCCTGGACACAGTCAGTATAATGCAAAAGATATCCCATAAACACATGGTTCTGATGTATGGCATATGCATGCACAGCATGGACATTCTTATGGTGGAGGAGTTTGTTCAGCACGGCCCTCTGGATCTGTTCATGAGAAACCATCGCTCTGATCTCACATCCTCTTGGAAGTTTCAAGTTGCGGAGCAGCTTTCCAGTGTCCTCAGTTATTTGGAGGATAATAAGCTTGTCCACGGCTATGTCTGCTCTAAAAACATCTTGTTGAAGCTGGATGGTCTGGAAGGACAGGGTGGTCCTTTCATTAAACTGAGTGATCCTGGACTGTCCATTTCTGTGCTCAGCCGAAGGGAGTGTATTGAAAGGATCCCCTGGATCGCTCCAGAGTGTGTTAATAACCCCAAAGCATTAAGCGTTGCAGCAGACAAGTGGGGGTTTGGGACCACGTTGTGGGAGATCTGCTACAATGGCGAGGTGCCCCTGTCTAAAATGAAGCTGTCAGAGAAAGAGCGATTCTATGAGGTGTGCGGTACTCTGGTCACTCCCAGCATCAGTGAACTGGCTGATCTGATCTCCCAGTGCATGAACTATGACCCCCGGAAGAGACCGTTTTTCAGAGCCATAGTAAGAGAGCTGGGCCGCATCAAAGAGCAACGAGAGCAGGAACTTATATCAGGGGTAATTCCTCCACAGGAGACTGATCCTGCAGATTTCAAGAGGAGATTCCTCAAAAAAATCCGAAAACTTGGAGAGGGTAACTTTGGGATGGTGGAACTGTGTATGTATGATCCTAATGGAGATCAGACAGGAGGAATAAACATCAAGCTCATTATGGAGTATTTGCCCGCCGGCAGTCTGAAAGAATACCTGCCCCGTAACAAATCCAACATTGGACAAAAGAGACTGCTGCTTTATGCTCTTCAGATATGTCAGGGAATGGAATACCTGGGATCTCAGAACTACATCCACAGGGATCTAGCAGCGAGGAACATCTTAGTGGAGAATGAATCACTTGTGAAGATTGGGGATTTTGGTCTGACAAAGAGCATCAAAGAAGATAAGGATTATTACAAAGTGACAGAAGAACAGGACAGTCCTGTGTACTGGTATGCTCCAGAGTGTCTGATTAATCGGAAGTTCTACAAGGCATCTGATGTTTGGTCATTTGGGGTCACCCTCCATGAAATTATGACCTACTGTGACCGTGAGAGCAGCCCTCCACAGGTTTTCCTGAAGATGATTGGTCGGTCTCAAGGGCAGATGACTATGGCCAGACTGGTAGAAGCTCTTGAGAAAGGCTGGAGGATGCCACGCCCAGATTCATGCCCTGAAATGGTGTACACTCAGATGCAGAGATGCTGGAGTCAAGCCCCAGAAAACAGAGTGGACTTCAGCAGCCTGACTGAGGAGTTTACGTTTCTCCACTCTAGAGAAAGCATCTAACTTCCTTTCATCACATCAGTTTCACCTACAGAATTCAGATTAATTTTATATTTTTCAATACCTTCCTCATTATACTAAAGCCCGGGGTATACTTCGGCCGTCTGCGTTTGTGCACCGTCCGCATGACGTAATTTTCGGCTGGCCGCACATCCCGGTGGGCATGCAACAGCGCACTGTGCATGTGTCGAACTCAGTCATCAGCGCGCATCCGTGGTTTAGTATACTTTAAAAGATGCGCGGGCGCGGAAAGTGAAGTATACCCGGGGATTAAGAACTATCATGCATGTTACTTTCTCTATAAATCATTGCTAGTTAATCACCTACCTCCAAAACACTCTGTTTATACAGTGTATTCTTATTGGTTAACACAACAACCTACACTTAGCACTTAACCTAAATTTATTTTTGGAAAGGTAAAATGCAGAAGTGCCTTAATATCACAGGAGATATATTTGTTGTATTTGACTGCAATATCTAAGACAGAGACAGACAGATAGAAAGAAAGAAAGAAAGAGAAAGAAAGAATGGAGAGTGGATGAATACTGTCATACTTGTCATTTCATTTTTCTATTTTTTTTTTTCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01605140_01622364.mRNA True 3825 mRNA 0.46 23 1604552 1622364

Neighbor

gene id symbol gene type direction distance location
CI01000004_01554696_01564701 NA coding downstream 39851 1554656 ~ 1564701 (-)
CI01000004_01440447_01443088 NA coding downstream 161260 1439771 ~ 1443292 (-)
CI01000004_01404265_01425424 NA coding downstream 179128 1404265 ~ 1425424 (-)
CI01000004_01394018_01397517 TMEM125B coding downstream 207035 1393969 ~ 1397517 (-)
CI01000004_01352499_01377500 SLC1A7A, SLC1A7 coding downstream 227037 1352073 ~ 1377515 (-)
CI01000004_01626984_01627238 NA coding upstream 3852 1626216 ~ 1627238 (-)
CI01000004_01758554_01762415 NA coding upstream 136058 1758422 ~ 1762415 (-)
CI01000004_01773383_01774888 INSL5B coding upstream 150564 1772928 ~ 1774942 (-)
CI01000004_01814534_01821755 CMPK1, CMPK coding upstream 191418 1813782 ~ 1821755 (-)
CI01000004_01833090_01839923 SLC35A3B, SLC35A3 coding upstream 210650 1833014 ~ 1839923 (-)
G25569 NA non-coding downstream 1261 1602784 ~ 1603291 (-)
G25615 NA non-coding downstream 8539 1592380 ~ 1596013 (-)
G25613 NA non-coding downstream 13697 1590620 ~ 1590855 (-)
G25612 NA non-coding downstream 14318 1589770 ~ 1590234 (-)
G25611 NA non-coding downstream 14788 1589536 ~ 1589764 (-)
G25559 NA non-coding upstream 6982 1629346 ~ 1669982 (-)
G25625 NA non-coding upstream 27624 1649988 ~ 1664053 (-)
G25688 NA non-coding upstream 59607 1681971 ~ 1682530 (-)
G25689 NA non-coding upstream 61009 1683373 ~ 1684639 (-)
G25687 NA non-coding upstream 62808 1685172 ~ 1686208 (-)
G26788 NA other upstream 1652069 3267683 ~ 3275721 (-)
G27746 NA other upstream 3555863 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 3998019 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 4912463 6538904 ~ 6541252 (-)

Expression


Co-expression Network