CI01000004_01853673_01854481


Basic Information

Item Value
gene id CI01000004_01853673_01854481
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1853188 ~ 1855232 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01853673_01854481.mRNA
AGTCGGTTACAGCACCTAAATATACAGTTCCATATACAATCAAATAAATTTTAACCTAAAATCTTGATGCAGAATAACAAAAAGATTAATGTCTACATAATTTTTATGCCAACAACCCCTAAATTAAGCAACAAACAATAACATGTACATTATCCAAAAATGTCATAAAAAGCCGAAAGTCAAACAAGTTTATTATTATTATACATAGGACATTTCATACACAATTGTAATTCAAAATGCTTTACATAAAAATTTTAAAAAAAAAATAATAAAATAAATATAACAGATGCATGAGAAATAAAATAAAATAATAAAAATAAAAAACAACAATAATTGTTTAAAAATCATACCAAAACAAGTTACATTTATTTATTTCTCGTTTGCCTCCCGTACGGCTTCCTCCCAGGGCACTGTCAGTTCCACTAGCACCACCTGCTTGCTCATCTCGGACCACAACACAAGGTCTGGTTTCAACGTGGTTTATGCGATAGAAGCGGAGAACTAGTCCTGTTCAGGTCTGTTCATAATGATCAGTCCCTGCCACTGGCTAGGACTGATGCCTTGTGCTTAGGAGGGCATTTATGCACTAACTGTCCTGCTCTTACAAATTGGACAGGCTGACTTTTAAGGCTCTGGGGCCTCTTGTTTGCCATCGCCCTTGCTCTTTCTGTGCATTCTGCCAACTTTCTTAGCACCTGGTCATGGCCTATAGCGGCCCTAAGCCCAGAGTTTTGCACCCACACAGAATGTGATGGAGAGTTCCCTGAGCTGCTTTGCACAGGCCACAGATTTCTTCAGCCCTAAACCACCATGCCAAGTTGACTGGGCTAGGAAGTGTGTCGTTGACGATGGTGTTGTCGACGCTGGTGTAGTCGTCTGCCTTCCACTTTCTGCCGGTCTGAACCTTGGCATCGGCATTTCGGACAAAATGGTCACTTTACTGGCTGAGCTTGAGTACCAGCCTGGTCTTCTCCAGCCTGTACCCAAGCAAAATGCTCTTTAGTGGGAGCTGAAAAGCATTTCTTCTGAACAATGTTGCATCAGAAAGGCATCACGGCAGCCTAAGCCATTTGCAGATATTGCTGTTGGAAATGGCATCCAGCCTTGCCACTGTTGTTGCTGTTATTTCACACATCTTCAGTGGCCACATCATACGTTGGTAGAGTCTCAACTGGAAATACCAGTTTGTATTTACCAGAAAGGTAGCTTTGTTCAATTACTGAGCTGTAACTGTGGTTGCCACACAACTTAATATTAGCCTACCATTTCAAGTTTTTAAACAGTCTTTTTGGACAGAAATGTCCATGCTACTATTTATGTTTTAACAAACTAGTGCAGATTACAGAAACTAAAATTTTTCTTTCAGATATTAATTCAAATTATGTAAATTTTTATTACAGCCTATTTTATTGTTGCTTTGTCTTCTGGGTAAATTTCATCTTCACAAAGCCAGAAAACCTCATTTTAGAATGTGTTCTGCTGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01853673_01854481.mRNA True 1488 mRNA 0.39 2 1853188 1855232

Neighbor

gene id symbol gene type direction distance location
CI01000004_01833090_01839923 SLC35A3B, SLC35A3 coding downstream 13265 1833014 ~ 1839923 (-)
CI01000004_01814534_01821755 CMPK1, CMPK coding downstream 31433 1813782 ~ 1821755 (-)
CI01000004_01773383_01774888 INSL5B coding downstream 78246 1772928 ~ 1774942 (-)
CI01000004_01758554_01762415 NA coding downstream 90773 1758422 ~ 1762415 (-)
CI01000004_01626984_01627238 NA coding downstream 225950 1626216 ~ 1627238 (-)
CI01000004_01859136_01861721 SEC22BB, SEC22B, SEC22BA, SEC22B.L, S22BB coding upstream 3899 1859131 ~ 1863688 (-)
CI01000004_01864053_01864374 NA coding upstream 8660 1863892 ~ 1864374 (-)
CI01000004_01874467_01874928 TSEN15 coding upstream 18979 1874211 ~ 1875203 (-)
CI01000004_01876658_01882471 NA coding upstream 21426 1876658 ~ 1882471 (-)
CI01000004_01923895_01931254 ANXA13, ANXA13L coding upstream 67920 1923152 ~ 1931254 (-)
G25661 NA non-coding downstream 95867 1755538 ~ 1757321 (-)
G25712 NA non-coding downstream 99728 1753239 ~ 1753460 (-)
G25700 NA non-coding downstream 122565 1728532 ~ 1730623 (-)
G25690 NA non-coding downstream 161127 1691294 ~ 1692061 (-)
G25672 NA non-coding downstream 162351 1689359 ~ 1690837 (-)
G25666 NA non-coding upstream 50081 1905313 ~ 1907541 (-)
G25744 NA non-coding upstream 55058 1910290 ~ 1910523 (-)
G25642 NA non-coding upstream 81967 1937199 ~ 1944111 (-)
G25640 NA non-coding upstream 161025 2016257 ~ 2018609 (-)
G25676 NA non-coding upstream 218501 2073733 ~ 2074026 (-)
G26788 NA other upstream 1419201 3267683 ~ 3275721 (-)
G27746 NA other upstream 3322995 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 3765151 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 4679595 6538904 ~ 6541252 (-)
G29388 NA other upstream 4776061 6631293 ~ 6631907 (-)

Expression


Co-expression Network