CI01000004_02198207_02227474 (PRKAG2A, PRKAG2B, PRKAG2)


Basic Information

Item Value
gene id CI01000004_02198207_02227474
gene name PRKAG2A, PRKAG2B, PRKAG2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 2197584 ~ 2227474 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_02198207_02227474.mRNA
GATTTGAGCACATTTGCATCCTCTCTTATGGACGGAGGGACTGACAGATCAGATAAAGATGAACTGCAAAAGATGATGATTTTGCACAGACCAGTCCAGGATCTCCTAAAACTGTCTTCCCACGTCCACTATCTTCTCACCAGGACTCACCTCCCAAATCTCCCCGCCGTCTCAGTTTCAGTGGTATCTTCCGCTCCTCATCCAGCTCAGCCCCTGCCAGCATCAAGCTCTTCTCCAGATCTAGAAAAAAGGTTTGGCAGTTTGCGTCGGACAAAGAGGCGCAAGGACGACGAGCTGCTCACCGGGAGACAGCAGTCAGAGTCGGCATGTCCATCTGGTATGCTGAATGAATGTCCTGATATCATGGTCATGCTCCATTCTACAGCTTTAAAGATTACTCCGAGCATATATCCTTTTGATCATGATATGGCAGTATTAGTAGAGGCTGGCTCTGGGCTTTCGACTCCCCCCACCACCCCGACGCAGAGTCCAGTTCCACCGGTCTTCCCTATAGAGACCCCCAGTCCTACGGAGCGTGTGGAGGAACGCCGCTCCCGCTCTCTCTCGTCTCCCCCTGACACAGGTCAGCGCTTCAGCCTGAGCACCTCCACCACCAAACCCCCTATCGCCTTGTACGCCTTTAACTCTACCTCACGCCAGGTGAGTGAACATCTTCACATGTGCTTTCTGGGCTTTACAATAGTTTACCCTTGTCCCAAAGTGAAGCAAGTCATTTTTGCACCACTAGTGGCACAAGCGACTTCCAAGTGGTGTCGATGTCTAAGGATGGTTAAAAATGTTGTCTATGTAGGCGGCTCTCTAGGGTTTGAAACAAAGCCACAGCAGAGCTGCGTACTTGCTGAAGGCATGCTGGAAAAACTTGAACTTGATGATGAAGCTGCTGAAGAGCCAGACAGTGATATTTACATGCGCTTTATGAAATCCCACAACTGCTATGACCTTATCCCCACCAGTTCCAAGCTAGTGGTTTTTGACACTACACTACAGGTAAAGAAAGCTTTCTTTGCCTTGGTTGCTAATGGAGTTCGAGCTGCCCCATTATGGGAAACGAAAAAGCAAAGTTTTGTGGGAATGTTAACCATCACAGACTTCATCATCATACTTCACAGATACTACAAATCACCACTGGTGCAAATATATGAACTGGAGGAGCATAAAATTGAGACTTGGAGAGAACTTTACTTGCAAGAAACGTTTAAACCCTTAGTCAACATATCTCCAGATGCAAGTATATTTGATGCTGTTTACTCACTCATCAAAAATAAGATCCATCGTTTGCCAGTGATTGATCCAGTCACAGGAAACGCCCTGTATATCCTCACTCACAAGAGAATCCTCAAGTTTCTGCAGCTCTTTGTGTGTGAGATGCCTAAACCAGCCTTCATGAGGCAGACTCTGGAGGAGCTGGGCATTGGCACGTACAGCAACATTGCTTTCATTCACCCAGATACACCCATTATTAAAGCACTGGGCATGTTTGTGGAAAGGAGAGTGTCTGCCCTGCCAGTGGTGGATGTCACAGGAAAGGTTGTGGACATTTACTCCAAATTTGATGTCATTAACCTGGCTGCTGAGAAGACATACAATAATCTGGACATCACCGTGACTCAGGCTCTGCTGCATCGCTCACAGTACTTCGAGGGGGTTATGAAGTGTTATCGGCACGAGACCCTGGAGACCATAGTGAACAGGATTGTCAAAGCTGAGGTGCACAGGCTGGTAGTGGTGGATGATAACTCCAGCATCGAGGGCATCATCTCCCTGTCTGACATCCTGCAGGCGCTGGTACTCACCCCCGCAGGTATAGACGCACAGAATTCCTAATCCAACCCTCCATTTCACTTTCCTTTTCTCCTCTCCACTCTTCCCTGGACCCAATCTCCTCTCCTTGGACATCTACCACTCGAGTGTCCCTCTCTGACCCCCTGATCACAGGTACAGTGGATTCTGATTGGCTTGCTATGATTGTACTGAATGAGGCTGGATGTAGGTGTGTATTCCAAAGTAATACACATCGTGACGGCATCACTGCAAGCGTTTGTCTGGTACTGTTTTTTTTATAACACAGACAGCTTATATATGACTGCAAGTTGACCTGACAGACTCTGTCAATGGCAAACAAATCAATATGAGACAGAAATAGCTGTCTGGTTAAATAGTGATTGGAATACAGCATGTGCCCTCAGCGCCCCTTATGAAGCCTGCTGGGAAAACTGCATGAAACACTCCACATCTCTCACATGCTCCTCAGCATGTTGTCTTTAATGTCTTGAGCTGCTAGAAGCAACACTCTTTTGAAATCAAAAATATGAAATGTAGATTGATGGAAAACCTGAAAATATGATGGAATTAAAAAAAAAAAAAAATCTGTTTTCTAGGCCAGAAAAGTTATGGAAATAAAAATCTAATAAAAACTTTAAAAGCCATATAAAATTGTAGAAATTAAA

Function

symbol description
prkag2b Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Wolff-Parkinson-White syndrome; glycogen storage disease; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart. Orthologous to human PRKAG2 (protein kinase AMP-activated non-catalytic subunit gamma 2).
prkag2a Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Wolff-Parkinson-White syndrome; glycogen storage disease; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart. Orthologous to human PRKAG2 (protein kinase AMP-activated non-catalytic subunit gamma 2).
prkag2 Enables adenyl ribonucleotide binding activity; protein kinase binding activity; and protein kinase regulator activity. Involved in several processes, including glycogen metabolic process; regulation of fatty acid metabolic process; and regulation of phosphorylation. Located in extracellular space. Part of nucleotide-activated protein kinase complex. Implicated in Wolff-Parkinson-White syndrome; glycogen storage disease; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart.

GO: NA

KEGG:

id description
K07200 PRKAG; 5'-AMP-activated protein kinase, regulatory gamma subunit

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_02198207_02227474.mRNA True 2468 mRNA 0.46 18 2197584 2227474

Neighbor

gene id symbol gene type direction distance location
CI01000004_02137991_02139934 NA coding downstream 57650 2137366 ~ 2140890 (-)
CI01000004_02074726_02085013 NMUR1B coding downstream 112480 2074485 ~ 2085104 (-)
CI01000004_02066165_02067630 NA coding downstream 129686 2066165 ~ 2067898 (-)
CI01000004_02027672_02032165 PFN2, PFN2L coding downstream 165419 2027425 ~ 2032165 (-)
CI01000004_02019772_02021213 NA coding downstream 176371 2019639 ~ 2021213 (-)
CI01000004_02245903_02355814 KMT2CB coding upstream 18429 2245903 ~ 2356190 (-)
CI01000004_02458156_02458869 NA coding upstream 230321 2457795 ~ 2458962 (-)
CI01000004_02571511_02598869 ARHGAP21B coding upstream 343837 2571311 ~ 2600082 (-)
CI01000004_02608555_02621378 NA coding upstream 380689 2608163 ~ 2621378 (-)
CI01000004_02638015_02638848 NA coding upstream 410360 2629744 ~ 2639335 (-)
G25660 NA non-coding downstream 2350 2194407 ~ 2195234 (-)
G25657 NA non-coding downstream 74340 2115454 ~ 2123244 (-)
G25676 NA non-coding downstream 123558 2073733 ~ 2074026 (-)
G25640 NA non-coding downstream 178975 2016257 ~ 2018609 (-)
G25648 NA non-coding upstream 10555 2238029 ~ 2240154 (-)
G25862 NA non-coding upstream 179610 2407084 ~ 2407355 (-)
G26529 NA non-coding upstream 189417 2416891 ~ 2418656 (-)
G26538 NA non-coding upstream 218131 2445605 ~ 2445812 (-)
G26541 NA non-coding upstream 224395 2451869 ~ 2452085 (-)
CI01000004_01773383_01774888 INSL5B other downstream 422643 1772928 ~ 1774942 (-)
G26788 NA other upstream 1046959 3267683 ~ 3275721 (-)
G27746 NA other upstream 2950753 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 3392909 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 4307353 6538904 ~ 6541252 (-)
G29388 NA other upstream 4403819 6631293 ~ 6631907 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location