CI01000004_02458156_02458869



Basic Information


Item Value
gene id CI01000004_02458156_02458869
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 2457795 ~ 2458962 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000004_02458156_02458869.mRNA
AGACTTTCACATTACACGTGAATCAACAACAAGAATCTCTTTGCCTAAAACATGCAAAAACAACTTTTACTTCTGCTTCATTTCTTGTGAAAAATGGGGGGAAATATATTCGTGCCCTATAAAAACATCAAAGTTCAAAATATCGTCCCCAGTACAAAATACATTAATCGCGTAAAGGTAATAAAAGCGCAATTCTTACGTCTTCATCCTCGCAGGCGTTTCTCTTGCGGTACTGGACCGCAGGTCGGGTTGAGGGGTGATGAGGACTCTTTCCAGTCTTATTCTCATCCTCAGGAACCTGTCCACCCAGGAGATGACTGGCTTCAGCCCGTCTGCAGAAAAGCGACAACAGCCTATATAAAACTGCACTCAGTCAACGGATTTAACAAACAGAGCTTACAACATCTCACTCCATTTCAGAGGATGAGGCGAGCGATGGAAGGACAGCAGTGAGAGCTTTACGCAGAGCAGTGTGTGTGTGTGTGTGTGTGGATGAGACGCGTTCTGCATGAGAAGTGACTACTGACAGGATATTTATCTGAAGAACATACACACCACGCACGGCTCTCAAATCTCACATTCACTTAGATAAAGAGCAATTACACTGACCGAAACTGTAGACTTTGTATCAACCATTCAATTGATAGACATTTACAAATGTTCAATATTCGGGAATAACCTTTCTCTTACTTCTAAACAATGCTGGAAAGGTCATATACGCAGTACTGGAGTGCCACACCGTGGTAAAATGAAATACAACAGCGCAGGCTGCTTTAAACAACAAGCAGTTAGTTTATTAATACTTTCCATTAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000004_02458156_02458869.mRNA True 814 mRNA 0.42 2 2457795 2458962

Neighbor


gene id symbol gene type direction distance location
CI01000004_02245903_02355814 KMT2CB coding downstream 101605 2245903 ~ 2356190 (-)
CI01000004_02198207_02227474 PRKAG2A, PRKAG2B, PRKAG2 coding downstream 230321 2197584 ~ 2227474 (-)
CI01000004_02137991_02139934 NA coding downstream 317861 2137366 ~ 2140890 (-)
CI01000004_02074726_02085013 NMUR1B coding downstream 372691 2074485 ~ 2085104 (-)
CI01000004_02066165_02067630 NA coding downstream 389897 2066165 ~ 2067898 (-)
CI01000004_02571511_02598869 ARHGAP21B coding upstream 112349 2571311 ~ 2600082 (-)
CI01000004_02608555_02621378 NA coding upstream 149201 2608163 ~ 2621378 (-)
CI01000004_02638015_02638848 NA coding upstream 178872 2629744 ~ 2639335 (-)
CI01000004_02664483_02667653 PRTFDC1 coding upstream 205521 2664483 ~ 2667653 (-)
CI01000004_02777722_02810321 CDC73.S, CDC73 coding upstream 318760 2777722 ~ 2810321 (-)
G26544 NA non-coding downstream 1079 2456411 ~ 2456716 (-)
G26541 NA non-coding downstream 5710 2451869 ~ 2452085 (-)
G26538 NA non-coding downstream 11983 2445605 ~ 2445812 (-)
G26529 NA non-coding downstream 39139 2416891 ~ 2418656 (-)
G25862 NA non-coding downstream 50440 2407084 ~ 2407355 (-)
G26568 NA non-coding upstream 25270 2484232 ~ 2485163 (-)
G26609 NA non-coding upstream 211351 2670313 ~ 2671760 (-)
G26635 NA non-coding upstream 271961 2730923 ~ 2731238 (-)
G26636 NA non-coding upstream 276633 2735595 ~ 2735829 (-)
CI01000004_01773383_01774888 INSL5B other downstream 682854 1772928 ~ 1774942 (-)
G26788 NA other upstream 815471 3267683 ~ 3275721 (-)
G27746 NA other upstream 2719265 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 3161421 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 4075865 6538904 ~ 6541252 (-)
G29388 NA other upstream 4172331 6631293 ~ 6631907 (-)

Expression



Co-expression Network