CI01000004_03277921_03285364 (FAM69AA, FAM69A)


Basic Information

Item Value
gene id CI01000004_03277921_03285364
gene name FAM69AA, FAM69A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3277741 ~ 3285364 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_03277921_03285364.mRNA
GTTCGCCTGTCCTATACTCGAGTGAAGTATCTCTTTCTCACATGGCTTGCTGTATTTGTGGGCAGTTGGGTTGTGTATGTGCAATACTCTACTTACACTGAGCTGTGCAGAGGACGAGAATGCAAGAGCATCATTTGTGACAAATACAGCAAAGGTATCATTGATGGATCTGCCTGTAGCAGCCTGTGTGAAGAAAGCTCACTATACTTTGGAAGGTGCCTCTCCACCAAGCCAAACAATCAGGTCTATACAGGCAGCTGGGGTGACCAGGACGGCATCATTAAGTGTCAGCTGAGTGACGTCCTGCACTATGAGCTGGGAGAGGAGCTGGAGCCAAAGAAAGAGATCGCACTCTTTGACAAACCCACTCGAGGAACCTCTGTAGAGAAGTTCAAAGAGATGGTTGCCAGTCATTTGAAGGCGAAAGTTGGAGAGCAAGCCAGTCTCCCCAGTTTGGTAAGCCTGATTCTTTCAGTGGCGGACAGCAATAAAGATGGCCACATCTCTCTGCCCGAGGCCAAGTCTGCTTGGGCTCTGCTGCAGCTCAACGAGGTTCTGCTGGCAGTGGTGCTCCAAGGCCGAGAGCACACACCTAGACTGTTGGGCTTCTGTGGGGACCTGTACATGGTGGAGCGGGTGCCTCACGCTCCGCTGTACGGCCTCAGTCTGCCGTGGCCCATGGAACTATGGATCCCTACGGGCATGCGGCGAAGCATGGACCAGTGGTTCACTCCTTCCTGGCCTCGCAAGGCCAAGATCTTTATCGGCTTGCTGGAACTTATAGAAGACATCTTCCACGGTACCTTTGGGAGCTTCTTAATGTGTGACATGAGAGCCAGTTCTTTCGGGTACACCGATCGTCACGACCTCAGGTTGGTGGACGGGCGGCGCGTAGTTGCCGAGGAGGCCTTCAAACAGGCCATGATCCTTCAGCGCTGTGAGGACGATGAGGACTGCGTGTACGGTGTGGACTGTAGGACTTCGTGTGACCGCGCAGAACACAGGTGCATGCCCGAGGTGGCTCAGCCCAACCTGGCCAGGGCCTGCAGAGCTATGAAGGATTACCTCCTACGAGGAGCTCCCTACTATATACAGGAAGAGCTGGAAAAGCAGCTGTATGCCTGCATGGCTCTCAAAGGTTCAGCCGAGCAGATGGAAATGGAGCACTCGCTCATTCTCAACAACCTCAAGACCCTGCTGTGGAAACAGATCTCACACACCAATGACTCCTGAAGGAAAAAGATGCGCTGGTGACTACATTCAGATTCCTGAATGTCTTCTAAAGCACTTCAGGCCATTGTGAATCTGGCTGGAGATTACTATGCTGGTAGGAAAGTGCTGGAAAAAATGCTGATGGCAATATTCAGTGCTGCTTTGATACTAAAGTTCTCTTTAGAATGAGGTAGAATTAAA

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_03277921_03285364.mRNA True 1413 mRNA 0.52 4 3277741 3285364

Neighbor

gene id symbol gene type direction distance location
CI01000004_03244252_03265862 EVI5 coding downstream 11694 3243903 ~ 3266047 (-)
CI01000004_03238528_03240932 GFI1AA, GFI1 coding downstream 36250 3238358 ~ 3241491 (-)
CI01000004_03214098_03222707 GLMNA, GLMN coding downstream 55034 3214098 ~ 3222707 (-)
CI01000004_03204599_03205569 TCEANC2 coding downstream 71673 3204572 ~ 3206068 (-)
CI01000004_03187077_03196194 MRPL37 coding downstream 81543 3187077 ~ 3196198 (-)
CI01000004_03433963_03436906 GADD45A, GADD45AA coding upstream 148468 3433832 ~ 3436906 (-)
CI01000004_03475454_03478135 NA coding upstream 189530 3474894 ~ 3479485 (-)
CI01000004_03505898_03508656 NSUN4 coding upstream 220434 3505798 ~ 3508770 (-)
CI01000004_03514180_03525227 PIF1 coding upstream 228309 3513673 ~ 3525582 (-)
CI01000004_03556991_03559357 ARTN coding upstream 271118 3556482 ~ 3559357 (-)
G26788 NA non-coding downstream 2020 3267683 ~ 3275721 (-)
G26820 NA non-coding downstream 62539 3214890 ~ 3215202 (-)
G26754 NA non-coding downstream 98383 3172410 ~ 3179358 (-)
G26744 NA non-coding downstream 144976 3132556 ~ 3132765 (-)
G26752 NA non-coding downstream 155481 3119950 ~ 3122260 (-)
G26810 NA non-coding upstream 15435 3300799 ~ 3306425 (-)
G26812 NA non-coding upstream 45381 3330745 ~ 3332243 (-)
G26811 NA non-coding upstream 57450 3342814 ~ 3355165 (-)
G26803 NA non-coding upstream 60636 3346000 ~ 3351924 (-)
G26837 NA non-coding upstream 69851 3355215 ~ 3355472 (-)
CI01000004_01773383_01774888 INSL5B other downstream 1502800 1772928 ~ 1774942 (-)
G27746 NA other upstream 1892863 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 2335019 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 3249463 6538904 ~ 6541252 (-)
G29388 NA other upstream 3345929 6631293 ~ 6631907 (-)
G29656 NA other upstream 4679000 7964364 ~ 7965500 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015255 dipk1aa coding NC_007113.7 CM002886.2 10642047 ~ 10687230 (+)