CI01000004_03475454_03478135


Basic Information

Item Value
gene id CI01000004_03475454_03478135
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3474894 ~ 3479485 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_03475454_03478135.mRNA
ACAGTTTGCATGTGCTGAACTGAAAGGCAACTTTAAGAACTAATGGGGGTTATGGCTGATGTATTCCATCTCACTCCCAGCAGACAGGCTTTTGGCCTCTGAGACTGAGGGGTGGACGTGTCATATTTAGTTACTTATACATAGAAATTCCTCCACATTTTTCAAGCCTGGGACAATCATGTTCCCTTGGCTGGAGACAAAAATGTGAACTTGTTATTTAGTTTTGACTCAGACTGAGTTCCAATTTTGAGGACTTAAGTCTTGACTCTGCAAATACAACATTTAAGACTTGACTTTGAATTTAATGCCATTTGACTTTGAGTTAAAGACAAACTACAGCCTAGTTACACTAAGTGACTGATAAAATGTCTAGTCATAACTTGGACCAACAGGAAAATGTTTGATAAATTAGGGATGGCCCACTTTACCTGAAAAGAAATTTGTCTGGAGTGCATGATCTCAAAATGTTTATACTTGCAAATAACACATTATATGAACTATTCAAATTGTATTATAGCTGGACCTTAAAGTTATAAGCAATAAAGAAAAAAAAAAATCTAAATTATACATTTAACAAAAAAGTGGCCAACTTTACCTGCATTCACCTCTATATCAGGGGTCTCCAGTACCAGTAGCTCATGACCTGATTGGAGGTATAGCTAGAGCTAATAGTGTCCCACTCCTTTTAATGCAAATTAAGTATTTATTTGACATATTGGCCGTGAGGTTATTTTTTCACTAATTTATGAACATGCAGATGTAATTACAATATAACAGAATAACAACCAACAATAGAAAAAAAAAAACAGGATGTTGATGTTTCAATCAAGCACGTCATCTGGCTTATATGGCTACAAGGCAGTGTTAGCTAGAAAACTTTGTTGTCATCAGGATGAGTAAAAACAGCGTCTAAGCAAAGAAAAGGGGGGGAAAAAACACTATTTTAATGAGGAATGGGAGAGTGGGATTATGTGTCTAATTTGCGGTGCTAACAACTGTAAAGGCTTGTTATAACTGGAGATTCTACCCAATTTCTACCCAATTTCAACAGTCTACTGGTTATAAGTCCACTGCTTGATTGGCATATAGAGCGAAATGCCAGGGGTTGCTTCCGATGGTTGGAGAGACCATTGTGTCTCATTTGGGTAGCCCCAAGCCAGTTGGTTACTACCTCGCCACGGTCCACTAACCCCACTGGGTGCATGGGTTTTAGGGTGAAAACCTGATAAACAGATCGATAACCACAGGCACCAGGAAACAAAAAGAAGACAAATCAAGCCTTAAAACTTGGAATGTGAGGAATATGTTATCAGGCATCACCGATGATCTTCAGCAAGTGATGCTCGAAAGATGGCAGTTATAAACAAGAAGCTACCAGAGGTTGCAGCTAGACATAGGTGCTCTTCAGGAGACTCCCGGGCGTTGGATCCATCAGGGAGAAGGATTTCACCTTCTTCTGGCAGGACAAGTCAAAAGACGAACAAGGAGAACATGGTTGTCCCACCAAACAAGCCACTGTTCATCCTCTGGGATTTCAATGCTAGAGTGGGCACTGACCACAACTCCTGGCCAACTTGCTTGGGTCAGTTTGTTGTTGGCAAGATGAACGAGAATGGACAATGCTTACTCGAGTTCTGTTGCCACCAAGGTCTGGGCATCACCAACACCTTTTTTAACACCAAGCCGCAGCACAAAGTTTTCCTGGGGACACCCAAGGTCCAAGCACTGGCATCACTTTGCTCCCAGATACGGTCTGCTGCAGATTCTGGAAACATCAAGGGGATGTATGACGGCATCAAGCAGGCATTGGGTCCTATGCAAAAGAAGACTGCACCCCTGTCCATCACAGGGAAGATAATACAAGACCAGGCTAAGCAGATGGAGCAATGGGTGGAGTTATATGCCAGGGAAAACATGAACAAGGGTGACAGAAGCGATTGCAATAACTATTGTGGCATATCTCTCCTAAGCGTGGTTGGGAAACTCTTTGCACAAGTTGTCCTGAAGCGCCTTCAGGTTCTTCCAGAGAGTTTATCCAGAGTCACAGTGTGGTTTCCGAGTCAACAGATCCACTGTCGACATGTTCTTCTCACTTCAACAGTTACAGGAAAAGTGCAAGATGGCTTCTTCAGGATCTTGGCAAAGATAGGCTGTCCACCAGCACTCCTCAGCATCATCAAGTCCTTCCATGCTGACATAAAGGGAACTGTTGTCTTTGATGGCTCAATCTTGGAGGCCTTCGACAAACAAAGTGGATTGAAACGGCTGTGTTTTAGCTCCCACACTGTTTGGCATCTTTTTCGCTGTCCTGCTGAAGAAGCTACTGCCTCAGATAGACCTCAGTGGAGACGGGCTGTGTTGAAAGGCCTCTCCAACTTTGAGGAGACATTCAATCAGCAGTCTGAGGCAAAGCGGCTGAGGAAGGCCAGGAGCCAAGCTCTCCAACCTGCCTCAGATGTCATCTACAAGTTTTGCGGCAGTGACTGCCACTCCCAAATTGGACTGTTGAGTCACAACCAACACTACACCGGTGATCCTCATCCAGTGTGATCCATGGTCTGAGACTGAAAGATGCCTAGAAATAAATATTAAAACATGTATTTCTGTGGAAGTCTTAGGACCAAAAAATGTTCAACCAATGACTGCATTTGGTCCGATGTCTCAACAATTTAGATAATAAAGTAGCCTATATAGAACTGTTTATGGAGCAGAAAAAATACCAATAATTTATTATTTTGATATCCTTTTCATAAAAATGGTTTAAAGGCTGAAATATGATTTAATAAACTTTTTTATGTCAAAACTTTATTTGAACATGTAGTACATTTGTTTGTAAATAACATGTAAGTCACTCAACCAATATTTTTGTTTGTTCAAAAGCCAGCCATCATTTTTAATGTTATTATTTTAATGTTTATGCAAAAAGTGCATAATGCTGCTAATTTTATTTATTTTTCGACATAAAACTTGGTGAAATTATTTCAGTGTCTATCAGTACTTTTAAACATTGCAGCATATTTTAACAATCACGTGATAATATTGATAACCGTGAGCATTATAATTGTAATATGAAAATTTCATACTGTCTCATCTCTAGTCAGCTCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_03475454_03478135.mRNA True 3110 mRNA 0.41 6 3474894 3479485

Neighbor

gene id symbol gene type direction distance location
CI01000004_03433963_03436906 GADD45A, GADD45AA coding downstream 37988 3433832 ~ 3436906 (-)
CI01000004_03277921_03285364 FAM69AA, FAM69A coding downstream 189530 3277741 ~ 3285364 (-)
CI01000004_03244252_03265862 EVI5 coding downstream 208847 3243903 ~ 3266047 (-)
CI01000004_03238528_03240932 GFI1AA, GFI1 coding downstream 233403 3238358 ~ 3241491 (-)
CI01000004_03214098_03222707 GLMNA, GLMN coding downstream 252187 3214098 ~ 3222707 (-)
CI01000004_03505898_03508656 NSUN4 coding upstream 26313 3505798 ~ 3508770 (-)
CI01000004_03514180_03525227 PIF1 coding upstream 34188 3513673 ~ 3525582 (-)
CI01000004_03556991_03559357 ARTN coding upstream 76997 3556482 ~ 3559357 (-)
CI01000004_03559459_03560064 NA coding upstream 79974 3559459 ~ 3560064 (-)
CI01000004_03588875_03589130 NA coding upstream 108491 3587976 ~ 3589253 (-)
G26854 NA non-coding downstream 68067 3406403 ~ 3406827 (-)
G26837 NA non-coding downstream 119422 3355215 ~ 3355472 (-)
G26811 NA non-coding downstream 119729 3342814 ~ 3355165 (-)
G26803 NA non-coding downstream 122970 3346000 ~ 3351924 (-)
G26812 NA non-coding downstream 142651 3330745 ~ 3332243 (-)
G26924 NA non-coding upstream 68989 3548474 ~ 3548695 (-)
G26948 NA non-coding upstream 178069 3657554 ~ 3657869 (-)
G26955 NA non-coding upstream 193454 3672939 ~ 3673155 (-)
G26902 NA non-coding upstream 339698 3819183 ~ 3929949 (-)
G26889 NA non-coding upstream 404880 3884365 ~ 3907456 (-)
G26788 NA other downstream 199173 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 1699953 1772928 ~ 1774942 (-)
G27746 NA other upstream 1698742 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 2140898 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 3055342 6538904 ~ 6541252 (-)
G29388 NA other upstream 3151808 6631293 ~ 6631907 (-)
G29656 NA other upstream 4484879 7964364 ~ 7965500 (-)

Expression


Co-expression Network