CI01000004_05073667_05096493


Basic Information

Item Value
gene id CI01000004_05073667_05096493
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 5072918 ~ 5097284 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_05073667_05096493.mRNA
AGTTTTTTTCCCACACCAAATAATACTGACAACATGTCTTCATTTTTACAAAAAAACATACAAAACCAAGGAAATATTTTAAACTATTACACTAGAACTTGATTCTTATCGGTCAATCAGGTTTTTATTTCTATAATGAATTTCATGGAGCCCAATAAAGGTCAGAAACAGTGCGTGATTGTCCAGTCTTTAATTCAGTCCATTAAAGTCAGTATGAAATGGAAATTCACGCTATTCATCCTGTCTATTATCTAAATACATCTTATTGATTTTATTGTTAACGATTCATCCATGGATGTTTTTTTTTTTTGTTTTTTTTTAGATTGTAATGATCTATCAAAATGTAATACTTATATCTCCTGGTGAAACAACAGACTGTCTGGTGACTTCTCCAATCATTTAGTCCGCTTATATCCCACCCCTTACAATTGACTGCAAGCTCACATTTAGATCTTCCTCTATCCAATCAACAACTGATGGATAGAACCAAGTACCCACTCAACTTTCTTTTATTTTCCAATAATCTGTTTTACTCTGATGTATGTCACAATGTGGTAGACAAGATCCGTTGCTACTTCTGCAACTACAAATTTGCTGATTCTGCATCAGAACTCTAAAAGTCATCCACACAGAAAGATGGCAAAAGCATACAAAGAGAATATGTGATCATGTTTCTCATTACCCATGCTGAGCTTCAGAATCAGTGGCTTCCTGAGCAGCAGATGAGTGGAGGTTAAATCTGCAGGCCATCTCAGGGATCTGGTTGATGTTAATGCCACCTGGGTGAGGAGATGAAGCAGCATCAGCGCTGCAGAGGCCAAGCTCTGATCTCATCCCACAAAGATGACACAGCTCTGCTCCCCGATGAGATGAAGATACGCTCTGGCCCTGGGATAAGGAATCATGGGATCATATGGAAATACATCACAGTAAAAAAAAAGGCAGGAAATATCTTAGATCTAGACGAATCTTTCTATTTTAAGATCCTCTTTATGGTCAAAGTCCTGTGTGTCCTTTGTTATTGTCAGTCAGATGGATCTCAGCTGCATAAGCTAAAGCTAAAACAGAAGAATGGCAAACAACAAACAGACCCAAAACAGCAGACCGGGAAAAGTATATGTGAGCTTGAGAGCTGTGATAAAGGCATACAGAAAACAGAAATCGAGGTGAAGAGTCTTGTCAAAGACAAGGATGCTGCATGGAATGTTAAAAGGGTGGAAACTGGTGACGGCAATGGGAGACGGAGAATAGGAGCACCGGCTCCATTCAATCACAGACAAAAGCACCAGAATGAGAAACAAGGCACGTCCGGCAGATCACAGGAGTCAGTGGTATCAAAGAGGCTTTGCCTCATGTCACCATCTCAGCTTTTAGAGACGATCTATAGAGGCAACAGGAAAAACAACCCAATCTACAACCAAAAGCTGCCAGTGTCATGCCACATTGACTTTTGTCTCCGTTCTCAAGGTCAGAAACTACAACAAAAGCTGTCCAAGCAGGATCAAGACAGGACAAAGGAACTGAAGCACTGACCCCTTGTCTTAATGAATAAGAGATGACAAAAGCATTCATTATTCACTGTGTGCTGTGTTGAGATTAGCCACTGACACACGCTCAAACTATATAACTTCTAATGAATTTGGCAGATGAGACATCATGAAAGTTCATGTTTCTGCTTTCACAAACTCAACCCATAAAACTTGTAGACTTAATAATCTATACATCAATCATCCAACATTACTGAAGGCAGAGCCTTTCATGTACTCTCAAAATACAGTTTTTTTTTATAGAGCTTCAAAAGGATTGAGATAATCTAATATGAATTCTTCTGTATTTTTTCTTGGTAGCTCAAAGGTCAGCAGTGTGAGGACCAACAAACAATCCAATATGAGAGATGTGTCTGGGAATTAGACAAGAAAAGGGTGTGTAGAAAAGATTTCAGGTGTATTGCAAGCCCCCGTTTGGAGATCAAATCCTCTACTAGTTATATGATCCAGTTCAGATATGGGTTTTTAATGCGTAGAGGGTCTGAAGATTGAGGATGTTATGGTGTGCTGAAAAACAAATAATCTGTGTTCCTTTGGCTATATTATCATTGATCAACCTGTCACAGTGACATGACTGACCATACAAGGTCTTGACCAATGTGAATCTCTTTTATACCCTGAGGCTTTAGAGCTAAATTACTTAAACATTAGTAACTATGGTGGATGTTTGCTCCATGTGTTCGATATTGACTGATGTCAGGCAGGTTATTGATCTGATAGATCCAGCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_05073667_05096493.mRNA True 2281 mRNA 0.39 6 5072918 5097284

Neighbor

gene id symbol gene type direction distance location
CI01000004_05001695_05020719 NTNG1 coding downstream 52111 5001617 ~ 5020807 (-)
CI01000004_04980768_04988531 NA coding downstream 83380 4980552 ~ 4989538 (-)
CI01000004_04909539_04912655 NA coding downstream 160205 4909539 ~ 4912713 (-)
CI01000004_04906112_04907528 NA coding downstream 165390 4905244 ~ 4907528 (-)
CI01000004_04894515_04904347 SH3GLB1B coding downstream 167797 4894486 ~ 4905121 (-)
CI01000004_05113181_05116553 AMY2A coding upstream 15878 5113162 ~ 5116578 (-)
CI01000004_05232776_05234535 NA coding upstream 135145 5232429 ~ 5235527 (-)
CI01000004_05248429_05300603 ABCA4B, ABCA4 coding upstream 151145 5248429 ~ 5300603 (-)
CI01000004_05318592_05325105 NA coding upstream 221308 5318592 ~ 5325105 (-)
CI01000004_05337445_05339997 NA coding upstream 239629 5336913 ~ 5340567 (-)
G27685 NA non-coding downstream 108690 4961931 ~ 4964228 (-)
G27672 NA non-coding downstream 180693 4891700 ~ 4892225 (-)
G27642 NA non-coding downstream 265377 4805698 ~ 4807541 (-)
G27615 NA non-coding downstream 297324 4773738 ~ 4775594 (-)
G27603 NA non-coding downstream 347813 4724532 ~ 4725105 (-)
G27740 NA non-coding upstream 47285 5144569 ~ 5153318 (-)
G27755 NA non-coding upstream 109472 5206756 ~ 5208585 (-)
G27859 NA non-coding upstream 143062 5240346 ~ 5245574 (-)
G27873 NA non-coding upstream 156390 5253674 ~ 5253923 (-)
G27890 NA non-coding upstream 200227 5297511 ~ 5297995 (-)
G26788 NA other downstream 1797197 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 3297977 1772928 ~ 1774942 (-)
G27746 NA other upstream 80943 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 523099 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 1437543 6538904 ~ 6541252 (-)
G29388 NA other upstream 1534009 6631293 ~ 6631907 (-)
G29656 NA other upstream 2867080 7964364 ~ 7965500 (-)

Expression


Co-expression Network