Gene
RNA
| Item | Value |
|---|---|
| gene id | trnas-gcu_111 |
| gene name | NA |
| gene type | coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NW_025048651.1 |
| NCBI id | JAEQBD010000996.1 |
| chromosome length | 828450 |
| location | 133530 ~ 133611 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| unassigned_transcript_3183 | True | 82 | tRNA | 0.59 | 1 | 133530 | 133611 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnas-gcu_110 | NA | coding | downstream | 1316 | 132133 ~ 132214 (-) |
| trnaq-uug_67 | NA | coding | downstream | 1714 | 131745 ~ 131816 (-) |
| trnap-agg_74 | NA | coding | downstream | 2122 | 131338 ~ 131408 (-) |
| trnas-gcu_109 | NA | coding | downstream | 2334 | 131114 ~ 131196 (-) |
| LOC122340606 | NA | coding | downstream | 3517 | 129907 ~ 130013 (-) |
| LOC122340607 | NA | coding | upstream | 1149 | 134760 ~ 134866 (-) |
| trnas-gcu_112 | NA | coding | upstream | 2361 | 135972 ~ 136055 (-) |
| trnap-agg_75 | NA | coding | upstream | 2585 | 136196 ~ 136266 (-) |
| trnaq-uug_68 | NA | coding | upstream | 2989 | 136600 ~ 136671 (-) |
| LOC122340627 | NA | coding | upstream | 3591 | 137202 ~ 137307 (-) |
| G191465 | NA | non-coding | upstream | 36268 | 169879 ~ 170323 (-) |
| G191469 | NA | non-coding | upstream | 64765 | 198376 ~ 199019 (-) |
| G191547 | NA | non-coding | upstream | 131307 | 264918 ~ 283892 (-) |
| G191546 | NA | non-coding | upstream | 146377 | 279988 ~ 280523 (-) |
| G191570 | NA | non-coding | upstream | 233700 | 367311 ~ 474266 (-) |
| LOC122340540 | LOC107693773,LOC107567814,LOC107724633,LOC107703636,LOC107757727,LOC107566941 | other | upstream | 239805 | 373416 ~ 397152 (-) |
| G191613 | LOC107679036,LOC107753386,LOC107564668,LOC107660993 | other | upstream | 459312 | 592923 ~ 597129 (-) |
| si:dkey-208k4.2 | LOC107658005,LOC107563342,LOC107730543 | other | upstream | 558440 | 692051 ~ 694623 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| rainbow trout (Oncorhynchus mykiss) | trnas-gcu-266 | NA | coding | NC_048593.1 | CM023247.2 | 34546304 ~ 34546385 (-) |
| eurasian perch (Perca fluviatilis) | trnas-gcu_19 | NA | coding | NC_053131.1 | CM020928.1 | 25076783 ~ 25076864 (+) |
| striped catfish (Pangasianodon hypophthalmus) | trnas-gcu_22 | NA | non-coding | NC_047613.1 | CM018559.1 | 14401394 ~ 14401475 (+) |
| striped catfish (Pangasianodon hypophthalmus) | trnas-gcu_6 | NA | coding | NC_047611.1 | CM018557.1 | 1097798 ~ 1097879 (-) |
| tiger barb (Puntius tetrazona) | trnaa-cgc_15 | NA | coding | NC_056704.1 | CM032073.1 | 13441990 ~ 13442061 (-) |
| mexican tetra (Astyanax mexicanus) | trnas-gcu_6 | NA | misc | NC_035917.1 | CM008320.1 | 14091509 ~ 14091590 (-) |
| mexican tetra (Astyanax mexicanus) | trnas-gcu_22 | NA | coding | NW_019172828.1 | APWO02000046.1 | 2285079 ~ 2285159 (-) |
