XLOC_000694


Basic Information

Item Value
gene id XLOC_000694
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 53656231 ~ 53658289 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003171
AATGCAACATTTGAAAAACGTCTTTATTGGatgtctaaataaacaaacaaaaacagtaactcacaataacaaatatatacatttaaaatataagttaatgagagaaaagtaaaaacaaacaaaaaccaaagTACAGTACGATAATGATGGTATTCCCAAAAATATTATCTTTGGGAGTCACTGGAGAAAAGAAAATATCGATGTAGCCGGCTGAATTTTGTAAAGCAATTAATATAATCTCAACGTTTTCTTCATTTTATATACACAACTCCTAAACGCTTAACACGCATCCTCATACGACAcagtgaaaaacacacacacacacccaatgcTTTGTAAAAATAACCAACTTTATGTTTCCATATTACTAATACACAGCTTTACAAATAGGATGATATGAACAAACCCTTCCATTTGAATGACATccctatgcaaaaaaaaagacttcaatCTCCCTCATACACTGCaatcaaatgaaaaaatatatataaacacacacacacgcgcacacacacaacctcCTTATAAAGACCTCAGGAACAGCAAGAGGACTGATCCTAAACCATCACATTCACCTGCTGTGGTTTACGAGCCACACGTTCCGGTTTTCACTGACCTGCCATACTCTATATTACATATTCACAGAGAAAACATTAAAACGATTAGTCATGTGCTTGGAAGAAAACAGGAAAGCAAACAAACCGAACAGAAACACTGAGGAGTATACAGTGAATTGATATGCAGGAGACGCACAGCAACGGCTTCCTTTATATAAAAGCTCTGTTGTGTAAAACCAAGGagttttttttggaggggggagAGGAGTACGAGGAGCCGGCTTTACTaataacagactttaaatttacatattggcattgatttggtCGTCAAAAAACCAACATCTGGATTCATTTTCCTATCCGTCCCTCATTGGACTGCTacctctgcacacacacacacacacacatacacacgcgcataCGATTGTGGCGATCATTCACACATTTCCTCCGGGAGCTCGTGAGGGTTCAGGATTCCTGGGACGGAGAGCTGGATTTTGTGTTTCTCCTCCTGAGCCTGACGGAGAGACGCTTCCCGCTCCTCTAGGAAGAGATCTGTTGAGTCCTCGCCTGCAAACTCCTgcgcacacaaatgcacacacacacttgattagTTTATATCTGGAGGGACGAATACTGATTAAAACATCACAGCATGCTAATATTCACAAAGAGCCCATTGTGTTCTACAGTACAGTACAAGTGCAGATAGACTTAAAgcgcacctattatgcaaaaatcacttatgAGGGGTTTAAACatagttgtgtggcagcagtgtgcgAATATAAGCATTAACCAATTAATggtaaacatgaatgaattgcatttttattatcatacatgacaaaacagtctgcagaaacactttgattgacattttccttTTGAATATATAATCTgaggggaaaagccccgcccattagtgaccatctctccctcattagcataaacagctctGAGTGAGCAAGTGGATTATAAAAgtggagttttaggatgcacagATGAACACTATTCTCAATAGACTGCCTTTCTTTAGGTACAACTTCAGTATTTAAGTACAActtttctactactactactaataataataataatagtattaatataacAAATACTACTAAGACAActatcactactactactactactaataataataataataatactaataatagtattaatacaaCAAATACTTCTAATACAACTAtcactacaactactactactactaattaaaataataataataatagtattaatacaacaactactactaatcactactactactactaacaacaacaacaacaaataacaaacaacaactactactaataataataatattagtaatacaactactactaatattacaACTAC

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0045839 negative regulation of mitotic nuclear division biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003171 True 1946 lncRNA 0.36 2 53656231 53658289

Neighbor

gene id symbol gene type direction distance location
XLOC_000693 si:ch211-213b8.4 coding upstream 120666 53515089 ~ 53535565 (+)
XLOC_000692 NA coding upstream 145608 53508505 ~ 53510623 (+)
XLOC_000691 NA coding upstream 164926 53490099 ~ 53491305 (+)
XLOC_000690 ucp1 coding upstream 267317 53374454 ~ 53388914 (+)
XLOC_000689 AL935166.1 coding upstream 288197 53364510 ~ 53368034 (+)
XLOC_000695 NA coding downstream 30688 53688977 ~ 53695555 (+)
XLOC_000696 pus10 coding downstream 56445 53714734 ~ 53730536 (+)
XLOC_000697 NA coding downstream 102508 53760797 ~ 53770739 (+)
XLOC_000698 ifngr1 coding downstream 184055 53842344 ~ 53863308 (+)
XLOC_000699 NA coding downstream 206239 53864528 ~ 53865837 (+)
XLOC_000687 NA non-coding upstream 334893 53320931 ~ 53321338 (+)
XLOC_000686 NA non-coding upstream 335557 53320159 ~ 53320674 (+)
XLOC_000703 NA non-coding downstream 324325 53982614 ~ 53988776 (+)
XLOC_000710 CABZ01067150.1 non-coding downstream 527750 54186039 ~ 54186156 (+)

Expression


Co-expression Network