CI01000004_06325293_06337484


Basic Information

Item Value
gene id CI01000004_06325293_06337484
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6325012 ~ 6337484 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06325293_06337484.mRNA
ATGTACCCACCTGTAGTCCACTCACAGCATTCTGGTTATTGCAACAGTACGTTCAAGAAATTTGTGCCTTCTGTTATTGTGGCATCACAATGCAAAGCTTTCATTGTATGGCTACCTGAGAACACGTATGTTATTGAAGGGAGCAGGACTAAAGGTCTTATGAATCAATGGCCCCTAGAGGCCAAGAGCCATTTATCCACCACAAATAAGCCATGTCAATCACTGACAGACATCACACCAAATAAAAGGAAACCAGCAAGAAGATTACAGGACTCCAGTACTCCTTGTGGAAGCATGTCTAGGGTGGAAGGTTACGGAGAGACTGACCTGCGCTCACAGCTACGAGCCTGTAGGACTGAGATCGCCATGGCAATCCATGATCCCTTCCCACTGCTGTATGGGCTGGTGGATCACGACATCATCTCTGAAGAGATTCTGAGGGAGACTTTAGAGCGAAAGAAAAAGGATGGGATCCACAAAGCTGTCTACTCACTGCTCACTTTGCTGCTGGACCAAGACGCTACTGTCCTCCAGGCCTTCTGGAGCAATCTCTGTAAAGAGTATAATAAGGAGTGTTACCCAAAACTGGAAACTCTGTTTATGAACCTCCCCAAAGGTACAGTGCACAGGCCTGGCAAAACATACAGGTTAAAGCAGGTGGCCAGACATGCTGGGAACCCCAGGCTTGAGCTGCAGGTACGCAGCCATTCAGGAAGAAAGAGAGGGCTGGCTGAAAAACACCTAACCCACCGGTCCCATCACCACACCAAGAAAGCCATAACATCCAGCTCAGCAAAAATTGCTGCGCGTTTGACGCAGATTCCCTGTTCTCACGCTGCTACTCGAAAACTTCCCGAGCAAACAAGAAATGTTCACATGACTATATATTTCAGTAGATTAATGAAATTGCCCATGAATAAATATGACTCTCAAAACGCAGGGGTCCAGGCCGTATCTACCTCAGTCCAGAGGGCCGTGGCTGTATCTGCCAGTGAGCATCCCACTGGCTGCGGGACAGTGGAGGGGATTCTGATCCAGCAGGTCATTGAGTCTGGAGGTGCCAAAAAATGCATCAAGGTTGGAGGAGAATTCTACTCTTCTGGCAAACTGGATGAGACAGCTGGAGTGCAAAAGACACAGACTGCACAAAACTATAGTCACCAGCAGGGAGAGCCAAGCACCAGAGTCATGGATATAGAGCATAATGATGATGAGTGTGCAGTGTGTAAAGATGGTGGGGAGCTCATCTGCTGTGATGGGTGTCCTCGCGCCTTCCACCTCACCTGCCTGGTCCCACCCCTCACCTCCATACCCAGTGGTTCATGGCGCTGTCAGCTATGCCAAAGCAACAGAGCGAAAGACAGGACATACACCCCCCTGCAGCCCACAGTTCACCCTCCAGTGACCGAGACAAGCTCCAGCTCTGCTGTGGACTTCTCCTTCTTCTCCTCTCTGTCCTCCACCTCACTCTCCACAGTCACAGGAGGCAAAAGCGCTCCACCAATGGGCCTCCAGGTGAGTCAACACATGAGTGACCAGGGCTTAACACCATCAGAGCAGCTGTTCAACAGAGATGAAATGGACTCTATAATGGGGGAGTCTTTAAAGTGTCTGAATGCTCGCTCTCAGGCAGATGGTGTTGTGACAGGCCAGGGGCCAGACGTTGTTGGAATGTTGCAGGGTTGCTATGGATACTTGTTCTTTAAGGCCCAACAAATAAGGAGCGGGGAATGTATTACGGTGGACCCTAAATCTCAGTAGAGCATGAAAGAAAATGTTTTTATATGAAAAGACATTTGGCAATGCAGACAGCATGTATCAATGAGACAGACTGCAGGATACTCTGAAGGCTGGTTCTGTTTTATCTCCTGCAGTGCCAGGATACTTCATGTTTATGATGTGTTAGTCTAAGCGTTCAGTCTTGCTTTATATATCAAAGACATTCTATATCCTTCATGTCCTATATCATTGATTTGTAAAGTCTGAAACTGGTGCCAAAGTTCTACCTAAAAGCAATACAGTGGATGTATTAAGGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06325293_06337484.mRNA True 2042 mRNA 0.48 14 6325012 6337484

Neighbor

gene id symbol gene type direction distance location
CI01000004_06308316_06314451 AMOTL2B coding downstream 10007 6308266 ~ 6315005 (-)
CI01000004_06221889_06232315 MKNK2, MKNK2A coding downstream 92697 6220798 ~ 6232315 (-)
CI01000004_06200669_06208703 CSNK1G2, CSNK1G2A coding downstream 116309 6199746 ~ 6208703 (-)
CI01000004_06183916_06192361 MFSD12A coding downstream 131534 6183130 ~ 6193478 (-)
CI01000004_06121326_06137773 NA coding downstream 187239 6121286 ~ 6137773 (-)
CI01000004_06339829_06343806 RAB6B.L, RAB6BB, RAB6BA, RAB6A, RAB6B, RAB6C, RAB41 coding upstream 1751 6339235 ~ 6343806 (-)
CI01000004_06345732_06359362 ESPNLB coding upstream 8137 6345621 ~ 6359521 (-)
CI01000004_06365131_06390103 KIF1AB, KIF1A, KIF1AA coding upstream 27132 6364616 ~ 6390103 (-)
CI01000004_06406371_06415282 NA coding upstream 68887 6406371 ~ 6416418 (-)
CI01000004_06419749_06423949 BOKB coding upstream 81703 6419187 ~ 6423987 (-)
G29208 NA non-coding downstream 26944 6285477 ~ 6298068 (-)
G29233 NA non-coding downstream 149112 6175696 ~ 6175900 (-)
G29172 NA non-coding downstream 279705 6044360 ~ 6045307 (-)
G29153 NA non-coding downstream 355883 5968478 ~ 5969129 (-)
G29132 NA non-coding downstream 481715 5839522 ~ 5843297 (-)
G29188 NA non-coding upstream 62155 6399639 ~ 6403721 (-)
G29385 NA non-coding upstream 290090 6627574 ~ 6627791 (-)
G29386 NA non-coding upstream 290492 6627976 ~ 6628269 (-)
G29387 NA non-coding upstream 291582 6629066 ~ 6629470 (-)
G29391 NA non-coding upstream 317739 6655223 ~ 6656385 (-)
CI01000004_05617072_05627369 NA other downstream 697498 5616644 ~ 5628289 (-)
G27746 NA other downstream 1121288 5178227 ~ 5203724 (-)
G26788 NA other downstream 3049291 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 4550071 1772928 ~ 1774942 (-)
CI01000004_06539836_06541252 NA other upstream 197343 6538904 ~ 6541252 (-)
G29388 NA other upstream 293809 6631293 ~ 6631907 (-)
G29656 NA other upstream 1626880 7964364 ~ 7965500 (-)
G29746 NA other upstream 2017014 8354498 ~ 8358127 (-)
G30316 NA other upstream 3040453 9377937 ~ 9406921 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location