CI01000004_06345732_06359362 (ESPNLB)


Basic Information

Item Value
gene id CI01000004_06345732_06359362
gene name ESPNLB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6345621 ~ 6359521 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06345732_06359362.mRNA
TCTCGTTACATTTCTGGCTCAGTGCTATCCACCCCCTTCATCTCTCCCATGGACATCTGTCAGCAAGCTCAGGTATCATTTTAGAGAGGGAGCGAGAGAGATAGCTGGGCATAGCCCAAGGACCCCTGCCACTTTTGTTTCGACTGGCCGAGATCTAGCATGGTGCTCCACAAGGCCATTCAGGCAGCTCGTGAGGGGGATGTGGAGACTCTGAGGGCCCTGCATGTGTCCGGATGCCTCAGTCCAGCCATCACAGACACCCAGGGAGCTTCACCCGTCCACCACGCCGCCCGCTGCGGGCAACTGGGCTGCCTGGAGTTTCTGGTGAACGAAGTTTGTTTCCCCTGCCACACCCGTACGAGAAATGGAGCTACGGCCGCCCATGATGCTGCTGCCACCGGGCACGTGCGGGAGCTGCAGTGGCTGCTGAGACAGGAGAAGTGTGGGATTGAGGATCGTGATGGCGAGGGAGCGACGGCCCTGCACCTGGCTGCCAGATTTGGCCATGCGGAGGCAGTACAATGGCTGTTGTTTGAGGGAGGCAGCACAGAGGCAGAGACAGATTGTGGAGCTCGACCTGTCCATTACGCTGCAGCCAGCGGAGATCTCACCTCCCTCAAACTGCTCATGTCCAGCCCCCCGCGGTGTGTGGACTGCCAGACAGGTACTGGGGCCACACCATTGTATCTAGCCTGTCAGGAGGGGCATCTGCATGTGGCTGAATACCTGGTGAAGGACTGTGGTGCAAATGTCCATGTGCAGGCCAAAGATGGCATGACTGTATTGCATGCAGCTGCACACATGGGACACCATGCCTTGGTGGTCTGGCTGGCCTCCTTCACAGATCTGGATCTGTCCTGTCAGGACAGAGATGGAGCCACAGCACTGCACTTTGCCGCTAGCGAGGGCCACCATCGCATTGTAGAGCGTCTCTTACTGATGGGAGCAAAAGTCCTGAAAGACCTCTGGGGTGGGACCCCTCTGCATGATGCAGCAGAGAATGGAGAACTGGAGTGCTGCCGAGTGCTGCTGAATAATCACATCAGTCCACTGGAGAGAGATTCGGATGGGTTTACTGCAGTGGACCTGGCAGAATACAATGGCTATCATGATTGTGCCAACTTCCTCCGTGATGCTGATGCTCATCAGTCCGCAGACATTGTTGTCATAGAGGAGGAAAGGACCTTGTTTAACACAACCAACCCCTACCAGGACATCAACAACCAGTCCTGTGAACTTGGACATAGTGGCCGGATGGAAAATAGCAAGCCGGTGAATGAAGTGCCTCCCCAGCCTCGTCCCTCTCCAGCATGTCTGGATACTTCAACCACATCTCCGGCCTCCTCACAGGCTAAGAGAGCTGGAGCTGGAGCTGGAACCATTCAACACATGCAAGTGGCCTCTACCGTTGTAACTTCATTTAACATGAGGAAACACCTTGAGGAAGAGGAGACGGTTTTATCTCATAAGTCCATGAGGTCACTGAGACAAGCAGGAATCACAGCGGTCTTCACTGGACAAACAATAAATAAAGGAGAGAATGGAATTGTTCCGCTTGCAGAGTTGGAAGCAAATCTTGCTGACATTGATTCTCTGATCCCAACTCATGATGAGAACGGGAGGCCCATTGCTGAATGGAAGAGGCAGGTTATGGTGCGCAAGCTTCAGGCTCGACTGCAGAACGAAGACAACCACTGCAGAAAAGACAACAGTGACAAACATATTGAGTTGGATGGTTGGCGGTATTCCCAAGTACACAATGTAATTTTGGGCCCTTTCGGAGAACTGCTTACCGAAGATGACCTGGTCTACTTGGAGGGACAGATTGAAACAATTTCCCTTCAAAAACGATGCCAGGCCTATGAACTAGAGCTTGCCCGGCTGGCGGAGGAACTTAGGGCCATCCTTCCTGCTCCCATTGTTAATATCACAGTCAACACCCAGTGCCAGCAGCTCCCAAACATGGAGGAATCTCTGCCTCTTCCAGTGTGGTACAATCGTATCTCAAATATAGTAAAGAGCATGTCACTGCTCCTGACAAACCTCTCAGAAACAAATGGTGAGGATGGGATCTGTAACACGGATCTGGCATCGGTCTTCACATACCGGCCAGAGAGGCAAAGTTCAATCAGAGGACGAAGGCAGAAGGTGGAACTGGAGATCCAGCAGTCAGGAGTTTCTGTGAGAAATTTAAGGTCCAACTTTGAAGGTCAGATAGGAAACATCTACCCATTTTCTGGCCTTTTAAACAACACATCTGACACAAGGCAGCAAAAACTGTCTACATCAACAAATCGAAATGAGCAGTCCATGGGGACAATCCAAAGCACTGACATAAATCACGTTAATGACAGTGCCATAAAATGCCAACAGGCACTGGGCAAAGATGCAACTAAAGTGATGGAGACCACCTGCTTGCGGAAGGAACGTATCGTTGTCCTCTTTTTGAGCCACTGGAAAAGGTCTGCGTATGCAATATCAGTGCGAGCCAAGATGAAACAAGAGCTTGGCACTCTTACAGGAGAAGGAATAACAACTCCAGTATCCAAGCCAGGAACCAGATCACTGTATCATCTCTACAGGCAAAGAACCGCAATAGACAAGATGATCGGCAACTGGAAACGCGTCGCCTCAGGGGTCCCATCACGTCAGATTCGAAGCCTCCAGAGGAAGCGTGTGACCTACTCGCCCGAGCAGTTCCTTCCTCGTGTGGACGGTGCTCCTGTTGCTTATGACAGCCTGACCCTTGACCTGTTCATGCTTGGGTATTTTCACATTCTTGAGCAGGACCTCCCAGCTGAGGAACGCAAGATGAGGCACCTGTTATGCTTTGAGGTGTTCGACCACATAGGGAACTTTCCCTGGGAGACAGTCCGAGACTTCCACAGGGCCGTCCTCAAGGACATTGAGGCTGGGAGACGCGAGTGGAAAGATGGTTTTGAGGACATCAAAATGCAATACTTTGGGAAAAGAGAAAATGGAGTTTCCAAGGAGTCTGTGAAGGATTCTTGTGCTGAGGTTAAAGTTGTGCCGCAAGTTATCATCGAGAATACCATACCAATTGATGGAGAACATCTCAGCAGAGATGGAGGCAATGATTTCTCAATGTTTAGTAATGATGAAATTTGTAAATATATTGATCGCAGTTTCACCTTCTGGAAGGAGAAAGAAGCAGAGCTGTTTGATTTTTGATATTTTTGAATGCGGTGATGGTTTATACTGTATATGAACACAATATAATTGTTAATTATTTTGAATACAAAATAATTTTGAATAATTATTTTGACATGCATTTTGAATAAA

Function

symbol description
espnlb Predicted to enable actin filament binding activity. Predicted to be involved in actin filament bundle assembly. Predicted to be active in cytoplasm. Orthologous to human ESPNL (espin like).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06345732_06359362.mRNA True 3303 mRNA 0.50 10 6345621 6359521

Neighbor

gene id symbol gene type direction distance location
CI01000004_06339829_06343806 RAB6B.L, RAB6BB, RAB6BA, RAB6A, RAB6B, RAB6C, RAB41 coding downstream 1815 6339235 ~ 6343806 (-)
CI01000004_06325293_06337484 NA coding downstream 8137 6325012 ~ 6337484 (-)
CI01000004_06308316_06314451 AMOTL2B coding downstream 30616 6308266 ~ 6315005 (-)
CI01000004_06221889_06232315 MKNK2, MKNK2A coding downstream 113306 6220798 ~ 6232315 (-)
CI01000004_06200669_06208703 CSNK1G2, CSNK1G2A coding downstream 136918 6199746 ~ 6208703 (-)
CI01000004_06365131_06390103 KIF1AB, KIF1A, KIF1AA coding upstream 5095 6364616 ~ 6390103 (-)
CI01000004_06406371_06415282 NA coding upstream 46850 6406371 ~ 6416418 (-)
CI01000004_06419749_06423949 BOKB coding upstream 59666 6419187 ~ 6423987 (-)
CI01000004_06441871_06454719 SEPT2 coding upstream 81955 6441476 ~ 6455013 (-)
CI01000004_06470183_06483783 HFM1 coding upstream 110662 6470183 ~ 6483783 (-)
G29208 NA non-coding downstream 47553 6285477 ~ 6298068 (-)
G29233 NA non-coding downstream 169721 6175696 ~ 6175900 (-)
G29172 NA non-coding downstream 300314 6044360 ~ 6045307 (-)
G29153 NA non-coding downstream 376492 5968478 ~ 5969129 (-)
G29132 NA non-coding downstream 502324 5839522 ~ 5843297 (-)
G29188 NA non-coding upstream 40118 6399639 ~ 6403721 (-)
G29385 NA non-coding upstream 268053 6627574 ~ 6627791 (-)
G29386 NA non-coding upstream 268455 6627976 ~ 6628269 (-)
G29387 NA non-coding upstream 269545 6629066 ~ 6629470 (-)
G29391 NA non-coding upstream 295702 6655223 ~ 6656385 (-)
CI01000004_05617072_05627369 NA other downstream 718107 5616644 ~ 5628289 (-)
G27746 NA other downstream 1141897 5178227 ~ 5203724 (-)
G26788 NA other downstream 3069900 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 4570680 1772928 ~ 1774942 (-)
CI01000004_06539836_06541252 NA other upstream 175306 6538904 ~ 6541252 (-)
G29388 NA other upstream 271772 6631293 ~ 6631907 (-)
G29656 NA other upstream 1604843 7964364 ~ 7965500 (-)
G29746 NA other upstream 1994977 8354498 ~ 8358127 (-)
G30316 NA other upstream 3018416 9377937 ~ 9406921 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015403 espnlb coding NC_007113.7 CM002886.2 22765492 ~ 22792460 (+)