CI01000004_06419749_06423949 (BOKB)


Basic Information

Item Value
gene id CI01000004_06419749_06423949
gene name BOKB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6419187 ~ 6423987 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06419749_06423949.mRNA
AGTGAAGTTGCTGTAGTTTTAGCTCGTGCCAAACAAACATGCGGGACATGACCGTGTTTGAGCGATCTCCCGTGACCGTGTTCGCCGCGGAGATGATGGAGGTGTTTGACCGGACTCCCACGGAAAAAGAACTCGTCTCTCAGTCCAAGGAACTTTGTAGAGACTTCATTCACTCCAGAATCATAAGGGAAGGACTCAGCTGGTCAAAAGTTGAGCCAGATCTGCCCGAGCCACACGGTGCTCTTGCAGATGTATCTGTGGTGCTTCTTAAACTGGGTGATGAACTGGAGTGTATGCGCCCATATGTGTATCGTAATATTGCAAAGCAGCTGAACATCAGTGTAGCAGTGGAGGCTGTGGTGTCAGATGCCTTTCTCTCTGTAGCAACAGAGATTCTAGCCATGGGGATCACATGGGGCAAAGTGGTGGCCATCTACGCTGTAGCTGCTGGGCTGGCTGTGGACTGTGTGCGACAGGGCCATCCAGTCATGGTGCACACCATTGTGGACAGTCTGGGAGAATTTGCGCGTAGGAGCCTGGTCCCATGGCTCAAAAAGCGGGGAGGATGGGGGGACATTTCAAAATGTGTGGTGAACATGGACTCTAGAGCTCATGCCCATTGGTTATCAACAGCTTTGTTATCATGGAGGGAATTCATAAAGACCATGTACATCTACCTGACGAAGTAGCCTTGTGCAGAAGTCATCCTCTTGACTGAGAACTGAATCTTTCCCTCCCAGAACTATCTGAATGGTCCATTGTACTGTTTGTGGAGCCCTGGGGAGCAATATAGCCCCTCACAAAGGTTACAGCACGTCATCCAGGTTCAACTGCACCTTAATCGTCATTTACCTTTAATTATTTCTTTAAAATATACTAAACATAGTGTGAAACAAATACTATGAGCTGACATTTTGTGGAGGGGATGGTACTATGAGGGAAAACGGCTATATTCATTGCTGGAGCTACATAATGTCTGTCTTCCTTAATATAAAATGACCCAGAAATAAGGTCTGCAGCTAAAGGAGCTCCTTTCGTGCTGATGATGCATGGTATGGATTCATTCTACTGAGATTTTATACTGAATAACTGTGCCATGAGTGGGATATTTTAATGTATGACAATGTTCAGATTTTTATTTTTACAAAATTGCTTAAGATTATGTTTGGAGTGTCACTTTGCACTTTCAATTTGTACAGTTTGTGGTGTGTGTAACACAGTTTTCACCAGCTGTATACATCTTTAAATAAA

Function

symbol description
bokb Predicted to enable protein heterodimerization activity and protein homodimerization activity. Predicted to be involved in extrinsic apoptotic signaling pathway in absence of ligand and intrinsic apoptotic signaling pathway in response to DNA damage. Predicted to act upstream of or within apoptotic process and regulation of apoptotic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrial outer membrane. Is expressed in several structures, including chordo neural hinge; nervous system; neural tube; ovary; and solid lens vesicle. Orthologous to human BOK (BCL2 family apoptosis regulator BOK).

GO:

id name namespace
GO:0005794 Golgi apparatus cellular_component

KEGG:

id description
K02561 BOK; Bcl-2-related ovarian killer protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06419749_06423949.mRNA True 1251 mRNA 0.45 4 6419187 6423987

Neighbor

gene id symbol gene type direction distance location
CI01000004_06406371_06415282 NA coding downstream 2769 6406371 ~ 6416418 (-)
CI01000004_06365131_06390103 KIF1AB, KIF1A, KIF1AA coding downstream 29084 6364616 ~ 6390103 (-)
CI01000004_06345732_06359362 ESPNLB coding downstream 59666 6345621 ~ 6359521 (-)
CI01000004_06339829_06343806 RAB6B.L, RAB6BB, RAB6BA, RAB6A, RAB6B, RAB6C, RAB41 coding downstream 75381 6339235 ~ 6343806 (-)
CI01000004_06325293_06337484 NA coding downstream 81703 6325012 ~ 6337484 (-)
CI01000004_06441871_06454719 SEPT2 coding upstream 17489 6441476 ~ 6455013 (-)
CI01000004_06470183_06483783 HFM1 coding upstream 46196 6470183 ~ 6483783 (-)
CI01000004_06497733_06501592 LRRC8D, LRRC8DA coding upstream 73718 6497705 ~ 6501592 (-)
CI01000004_06510788_06533217 PKN2 coding upstream 86413 6510400 ~ 6533382 (-)
CI01000004_06539836_06541252 NA coding upstream 114917 6538904 ~ 6541252 (-)
G29188 NA non-coding downstream 15466 6399639 ~ 6403721 (-)
G29208 NA non-coding downstream 121119 6285477 ~ 6298068 (-)
G29233 NA non-coding downstream 243287 6175696 ~ 6175900 (-)
G29172 NA non-coding downstream 373880 6044360 ~ 6045307 (-)
G29153 NA non-coding downstream 450058 5968478 ~ 5969129 (-)
G29385 NA non-coding upstream 203587 6627574 ~ 6627791 (-)
G29386 NA non-coding upstream 203989 6627976 ~ 6628269 (-)
G29387 NA non-coding upstream 205079 6629066 ~ 6629470 (-)
G29391 NA non-coding upstream 231236 6655223 ~ 6656385 (-)
G29402 NA non-coding upstream 346375 6770362 ~ 6770583 (-)
CI01000004_05617072_05627369 NA other downstream 791673 5616644 ~ 5628289 (-)
G27746 NA other downstream 1215463 5178227 ~ 5203724 (-)
G26788 NA other downstream 3143466 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 4644246 1772928 ~ 1774942 (-)
G29388 NA other upstream 207306 6631293 ~ 6631907 (-)
G29656 NA other upstream 1540377 7964364 ~ 7965500 (-)
G29746 NA other upstream 1930511 8354498 ~ 8358127 (-)
G30316 NA other upstream 2953950 9377937 ~ 9406921 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015400 bokb coding NC_007113.7 CM002886.2 22640215 ~ 22650435 (+)