CI01000004_06827636_06828127


Basic Information

Item Value
gene id CI01000004_06827636_06828127
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6827444 ~ 6828364 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06827636_06828127.mRNA
AAGCGAACATTGAGTCAGGCGTACTGACACGTACACAGCATGTTGCTTTTTCGCTCTACATGTCATGCTAATAGAAATCAGGGATGCCGCTGTTGTTATTGAGGCAGACAGCTGATATGAAGCAGCGTTTAGCTTGCCTGCTAGCTTCCCCCACCCAACAGAAAACAAAAGACCGTGGCAGCCTTATAACCTCACACCGCTGCCGTGACATGAAGCACACGATTAGAAATTAACTTTATGTATGTGATAAGAGTTAGCCAAAGAGCTAATGAGGTAGATGGAGAGAAAGGCAAAGAAAAAAACACAGGCTGTCAGTCCTCCCACCCCTCGCGCCTCTGCTTGAACCACGTCATTGACTCCAACACTGCGGAAATAACAGACTCGCTGTCGCTGCTTACCCGTGTCTCCGATTATGATGTATTTGAAGAGATACGCGTACGCCATGGCCAACCGGTCCTTTATCAACCTGCTCTGGCCTTACTAAAATGGCTCCTTGAAGCTAAAACCGCAGGGAAAGTGTGTGTGATATATGCCTCCGCTAAGCCAGCCCTTTTCTCCTCTCGACGGGAAGGAACAATAAACACCTCGAGCTCCAGCCGGTCTACGTCACACGTCCCGCCTTCGCCACGCACACAGAACAGAAGAGGTTGTGGACTTCACCGGAAGTTCACTCACCTAAACCACTATGTGTCAGGTCAATGTTCATCGAGAGGGCAGATATATCAGTAGACGTAGGCTAAGGGTTTTATTGTTCGCAAGACACTTTACAGAAGAATAATTATCATTCTAAAGATTCACACCTTGCATTGATCTCTCAAAAAGTGGTCGTGAGTGAACTCCTGAATGTTAAAACAGCAAAGCTGACGAATCTCCCGTTTAAAACCAATAATCAACCACACTTGAGCACTCTCAGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06827636_06828127.mRNA False 921 mRNA 0.46 1 6827444 6828364

Neighbor

gene id symbol gene type direction distance location
CI01000004_06805399_06814604 CAR8, CA8 coding downstream 12840 6805217 ~ 6814604 (-)
CI01000004_06677179_06740196 TOX coding downstream 87248 6677179 ~ 6740196 (-)
CI01000004_06569673_06570071 NA coding downstream 257273 6569596 ~ 6570171 (-)
CI01000004_06555703_06558890 HS2ST1, HS2ST1A, HS2ST coding downstream 268554 6555477 ~ 6558890 (-)
CI01000004_06547877_06549227 NA coding downstream 278217 6547390 ~ 6549227 (-)
CI01000004_06915152_06921193 FBXL7 coding upstream 86225 6914589 ~ 6921193 (-)
CI01000004_06960750_06963258 MPLKIP coding upstream 132311 6959573 ~ 6963282 (-)
CI01000004_07008022_07016495 INHBAB coding upstream 179464 7007828 ~ 7017478 (-)
CI01000004_07024832_07032532 AFG3L2 coding upstream 195329 7023693 ~ 7033161 (-)
CI01000004_07055639_07067152 CTDSPL, CTDSPLA, CTDSPLB coding upstream 227046 7055410 ~ 7067152 (-)
G29411 NA non-coding downstream 23057 6804003 ~ 6804387 (-)
G29408 NA non-coding downstream 31823 6795322 ~ 6795621 (-)
G29402 NA non-coding downstream 56861 6770362 ~ 6770583 (-)
G29391 NA non-coding downstream 171059 6655223 ~ 6656385 (-)
G29387 NA non-coding downstream 197974 6629066 ~ 6629470 (-)
G29351 NA non-coding upstream 44208 6872572 ~ 6875863 (-)
G29433 NA non-coding upstream 68657 6897021 ~ 6897255 (-)
G29441 NA non-coding upstream 135769 6964133 ~ 6964337 (-)
G29451 NA non-coding upstream 149022 6977386 ~ 6977609 (-)
G29388 NA other downstream 195537 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 281872 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 1199930 5616644 ~ 5628289 (-)
G27746 NA other downstream 1623720 5178227 ~ 5203724 (-)
G26788 NA other downstream 3551723 3267683 ~ 3275721 (-)
G29656 NA other upstream 1136000 7964364 ~ 7965500 (-)
G29746 NA other upstream 1526134 8354498 ~ 8358127 (-)
G30316 NA other upstream 2549573 9377937 ~ 9406921 (-)
G31203 NA other upstream 3918073 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 4579101 11406957 ~ 11412907 (-)
G29386 NA non-coding downstream 144254 6627976 ~ 6628269 (-)
G29385 NA non-coding downstream 144732 6627574 ~ 6627791 (-)

Expression


Co-expression Network