CI01000004_06915152_06921193 (FBXL7)


Basic Information

Item Value
gene id CI01000004_06915152_06921193
gene name FBXL7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6914589 ~ 6921193 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06915152_06921193.mRNA
ATTCGGACCTTAGTATGCGAACAGTCAGTACGCCAAGTCCAGCTCTGATTTTGCCACCTCGTTCATCTTCAGCCGTACTTAATGGCTCCTCTACATCCTCTTCCACGTTCGGCACAGAAACCATCGCCATGGTCCACACGCCGCCCACTTCCCTCACCCATCCTCAAAAGGGCCTGCGGCAACCAAAAGACCAACAGGGGGCGCCCATTGACATCCTCCCTGACCATGCTTTCCTACAGATCTTCACCCACTTGCCCACCAACCAGCTGTGCCGGTGCGCCCGTGTGTGCCGTCGCTGGTACAACTTGGCGTGGGACCCCCGCTTGTGGAGAACTATTCGTCTGACGGGAGACGTGCTACATGTGGACCGTGCGCTTCGGGTTCTCACTCGCAGACTGTGCCAGGACACCCCCAATGTGTGTCTGACCCTGGAGACGGTGGTGGTCAGTGGCTGTCGGAGGCTGACTGATCGAGGACTGTACACAGTGGCACAGTGCTGCCCAGAACTCCGGCGCTTAGAGGTGGCCGGCTGTTATAACGTGTCCAACGAGGCTGTGTTTGAGGTGGTGTCACGCTGCCCCAACCTGGAACACCTGGATGTTTCAGAGATTATTCTGAAATGTCCAGGACTTCCTCTTGGAAAAGCTGGAAAAGGGTGCTCTAAGGTAACCTGCATCAGCCTGACTCGGGACGTATCCGTGAAACTCTCCCCTCTTCATGGCCAGCAGATCTCTATCCGCTATCTTGACATGACTGACTGTTTTGCTTTGGAAGACGAAGGCCTGCACACCATTGCAGCTCACTGCACTCAGCTCACCCACCTCTACCTGCGGCGCTGCGTGCGTCTGACCGACGAGGGCCTGCGATTTTTGGTCATCTACTGCCCATCTGTGCGGGAGCTCAGTGTCAGCGATTGCCGCTTCATCAGTGACTTTGGCCTGCGGGAGATCGCTAAACTAGAGGGCCGCCTGCGGTACCTCAGCATAGCGCACTGCGGCCGCATCACAGACGTGGGCGTGCGCTATGTGGCTAAATACTGCATCAGACTGCGTTACCTGAACGCTCGTGGCTGCGAGGGACTGACGGACCACGGCATTGAGCACCTTGCCAAGAACTGCCTCAAGCTCAAGTCCCTGGACATTGGGAAGTGCCCGTTGGTGTCGGACGCAGGCCTGGAGCAGCTTGCACTAAACTCGTTCAACCTGAAGAGACTGAGTCTGAAGTCATGCGAGAGCATCACGGGCCGTGGGCTGCAGGTGGTTGCGGCAAACTGCTTCGACCTTCAGCTGCTGAATGTACAGGACTGTGACGTGTCACTGGAGGCACTGCGCTTTGTCAAACGTCACTGTAAACGCTGCGTCATTGAACATACCAATCCAGCCTTTTTCTGAGAGCTGCACACATGAGATTGTGTGGATGGATTTGAGAAGGTAATCTCTTTTGACCCGGGCCGGTGACGTCTCTGCTATACAACATAGCAGAGATTTGCACTGCTCCACCTCTGTATTTAATTTGCATGGTTGGGAGAAATCTTAACTTTTTAATTCATCTATTTATATTTTTATTCACTTATATATTTTTTTTTGATTACTCATCTTTTCTATGTCAGATTGTATTACATGTAACATGTACATTTCAAGCAATGAATTTTAATGAATGCAATTTGTTGATGCATAGAGGATTACATGATGTGACTTTAACCAGAAATGAAACTATTTTGCAGAACTACGGTGGCCCATAATTCAGTTTCTTTAGTGTTTACATTTGATATCTCTGTTATGAATGTTTTGCTTTGTTTCATCATGTAAGCCTTGTAATAGCTTGGTTTCTATCTTGGTTTCATTGCCAAGGAATTTTACCAAACAGTGCCATTTTTGCTGTGACGTTCACCTTTGTAATGGTCAATAAGGCTTGTTTCAGGTGTTTAACAAATGGATGACCACAGTGGAATAAA

Function

symbol description
fbxl7 Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and microtubule organizing center. Predicted to be part of SCF ubiquitin ligase complex. Orthologous to human FBXL7 (F-box and leucine rich repeat protein 7).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K10273 FBXL7; F-box and leucine-rich repeat protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06915152_06921193.mRNA True 1954 mRNA 0.50 3 6914589 6921193

Neighbor

gene id symbol gene type direction distance location
CI01000004_06827636_06828127 NA coding downstream 86225 6827444 ~ 6828364 (-)
CI01000004_06805399_06814604 CAR8, CA8 coding downstream 99985 6805217 ~ 6814604 (-)
CI01000004_06677179_06740196 TOX coding downstream 174393 6677179 ~ 6740196 (-)
CI01000004_06569673_06570071 NA coding downstream 344418 6569596 ~ 6570171 (-)
CI01000004_06555703_06558890 HS2ST1, HS2ST1A, HS2ST coding downstream 355699 6555477 ~ 6558890 (-)
CI01000004_06960750_06963258 MPLKIP coding upstream 39482 6959573 ~ 6963282 (-)
CI01000004_07008022_07016495 INHBAB coding upstream 86635 7007828 ~ 7017478 (-)
CI01000004_07024832_07032532 AFG3L2 coding upstream 102500 7023693 ~ 7033161 (-)
CI01000004_07055639_07067152 CTDSPL, CTDSPLA, CTDSPLB coding upstream 134217 7055410 ~ 7067152 (-)
CI01000004_07091217_07093407 ZBTB47 coding upstream 170007 7091200 ~ 7093407 (-)
G29433 NA non-coding downstream 17334 6897021 ~ 6897255 (-)
G29414 NA non-coding downstream 17639 6821967 ~ 6896950 (-)
G29351 NA non-coding downstream 38726 6872572 ~ 6875863 (-)
G29411 NA non-coding downstream 110202 6804003 ~ 6804387 (-)
G29441 NA non-coding upstream 42940 6964133 ~ 6964337 (-)
G29451 NA non-coding upstream 56193 6977386 ~ 6977609 (-)
G29476 NA non-coding upstream 176549 7097742 ~ 7097980 (-)
G29358 NA non-coding upstream 227989 7149182 ~ 7150510 (-)
G29388 NA other downstream 282682 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 369017 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 1287075 5616644 ~ 5628289 (-)
G27746 NA other downstream 1710865 5178227 ~ 5203724 (-)
G26788 NA other downstream 3638868 3267683 ~ 3275721 (-)
G29656 NA other upstream 1043171 7964364 ~ 7965500 (-)
G29746 NA other upstream 1433305 8354498 ~ 8358127 (-)
G30316 NA other upstream 2456744 9377937 ~ 9406921 (-)
G31203 NA other upstream 3825244 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 4486272 11406957 ~ 11412907 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015390 fbxl7 coding NC_007113.7 CM002886.2 21634128 ~ 21734733 (+)