G24632 (LOC107584022)


Basic Information

Item Value
gene id G24632
gene name LOC107584022
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 373527 ~ 374082 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU36680
GTTTGAGCCGGCTGAGGGCTCTCTTGTGCACGTGCTTCCTGTGGTAATCTGTGCCCACGATGCTCAGGGCTGCTCAGCGTATCCGGCACACCGAACGCCCCTCCCGCCATCACAAAGCGAGCCGGCGACATCACGGTGGGCACGCTGAAACTCAGCCCGCTGCTGGCGGCCCCCTCGGCGCCGGAGCTGGGCGTCGCACCCGCTATGAGCGGCGAAGGCACCAGAAAATACGGCATGGCCACAGCCGGCACGCCGCCCTGCCCGTGTCCCGCCGGCACGAGGAAGTTCAGACCGTTCA
>TU36683
GTTTGAGCCGGCTGAGGGCTCTCTTGTGCACGTGCTTCCTGTGGTAATCTGTGCCCACGATGCTCAGGGCTGCTCAGCGTATCCGGCACACCGAACGCCCCTCCCGCCATCACAAAGCGAGCCGGCGACATCACGGTGGGCACGCTGAAACTCAGCCCGCTGCTGGCGGCCCCCTCGGCGCCGGAGCTGGGCGTCGCACCCGCTATGAGCGGCGAAGGCACCAGAAAATACGGCATGGCCACAGCCGGCACGCCGCCCTGCCCGTGTCCCGCCGGCACGAGGAAGTTCAGACCGTTCAGACCTACAGAATTTACAAGCGTTAGAACGAGCGCGTAATCGGAAAAACTGACATTCCCTGCTCCGGTTTCCGGCGTACCTGCTGTGTTAGGGACATAGAGGTAATGAGAGGACAGCAGGGGGTCCCTAGGGCCGGGGGCCCCCGCGTCTTCCTCATTCGTCGACCCGAACGAGGCCTCGTCCCACGGGGAACCTTCCCGAGAGCAGACCGGAGACCTTCTGGTGCTGGAGCTCAGACTCTCGGTCTCACCCTGTCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36680 False 298 TUCP 0.67 1 373527 373824
TU36683 True 556 TUCP 0.63 1 373527 374082

Neighbor

gene id symbol gene type direction distance location
zdhhc17 zdhhc17,LOC107708015,LOC107658960,LOC107656450 coding upstream 12605 343592 ~ 360922 (+)
LOC122343357 LOC107658963,LOC107708011,LOC107555883 coding upstream 160368 205505 ~ 213159 (+)
glipr1a NA coding upstream 173991 195092 ~ 199536 (+)
frs2a frs2,frs2a,LOC107658966,LOC107590545,LOC107729158 coding upstream 266222 90208 ~ 107305 (+)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 coding upstream 284375 87004 ~ 89152 (+)
LOC122342832 NA coding downstream 486514 860596 ~ 863551 (+)
LOC122342829 LOC107705336,LOC107583937,LOC107656238 coding downstream 493114 867196 ~ 888759 (+)
fgd4b LOC107658950,LOC107705337,LOC107656390,LOC107590534,LOC107584024 coding downstream 516615 890697 ~ 908324 (+)
nampt1 nampt,nampta,LOC107658946,LOC107705339,LOC107656408,LOC107718548,LOC102790888 coding downstream 543500 917582 ~ 931678 (+)
sypl1 sypl1,LOC107590538,LOC107658778,LOC107583939,LOC107656429,LOC107718552 coding downstream 559964 934046 ~ 937823 (+)
G24631 NA non-coding upstream 674 372374 ~ 372853 (+)
G24628 NA non-coding upstream 10759 362442 ~ 362768 (+)
G24594 NA non-coding upstream 57961 253265 ~ 315566 (+)
G24587 NA non-coding upstream 90686 242566 ~ 282841 (+)
G24586 NA non-coding upstream 91543 215975 ~ 281984 (+)
G24633 NA non-coding downstream 476 374558 ~ 374844 (+)
G24634 NA non-coding downstream 1843 375925 ~ 376208 (+)
G24635 e2f7,LOC107656240,LOC107707966,LOC107658780 non-coding downstream 5121 379203 ~ 379444 (+)
G24638 e2f7,LOC107658780,LOC107707966,LOC107576736,LOC107576735,LOC107656240 non-coding downstream 6469 380551 ~ 383178 (+)
LOC122342795 NA non-coding downstream 13113 387195 ~ 388081 (+)
G24609 NA other upstream 78458 293235 ~ 295069 (+)
cmah cmah,LOC107555874,LOC107729160,LOC107656456,LOC107590555 other upstream 179344 184716 ~ 194183 (+)
G24555 cpsf6 other upstream 288565 83688 ~ 84962 (+)
gpr22a gpr22a,LOC107658958,LOC107583929,LOC107729153,LOC107708019,LOC107590528,LOC107656448 other downstream 60261 434343 ~ 439352 (+)
G24771 plekha5,LOC107584023,LOC107658747 other downstream 280010 654092 ~ 665530 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other downstream 871496 1245578 ~ 1249169 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other downstream 914215 1288297 ~ 1291224 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other downstream 955370 1329452 ~ 1331843 (+)

Expression


Co-expression Network