si:dkey-97m3.1


Basic Information

Item Value
gene id si:dkey-97m3.1
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 47610 ~ 73681 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU36763
acacacacacacacacactcatactcactCGTGTCTCCATCAGCGCTGCGCCAGAGGCGCGTTCACTGCAGCTCTGTGGAGCGCGCACGCTAGAGAGAGGGACGCGCTGCTGCGGCTCGGAACATCTTCACCGGCGTGATTCATGATCAAGtgttcaGGAGGAGCGGCGTTCGTCTCTCACCGTCGTCATGGCCTCGATATCGGAGTGGTACGCAGGGAAGAACGTGCTGATCACCGGAGCCACGGGCTTCATGGGGAAGGTGCTGGTGGAGAAGCTGCTGCGCTCCTGTCCCGACGCCAACGCCTCTACATCCTCGTCCCGCCCAAAGCCGGTCAGTCCATGTCCGAGCGCGTGCAGGACATGATGAAGTGTAAGctgTTTGACCGCTGCGGCGTGAAGATAATCCTGACTTTCATCAGAAGATCATCCCCATCAGCAGCGAGCCCATGCAGCCCGGCCTGGCCATCAGTCCAGAGGATGTACAAACACTC
>XM_043236916.1
TGTCACAAATGAAAagcactttcattttctcaaacaCGTATGGAATTTAAGCTAGTTTCCAATCGCtagtgaaaaaaacattaataccgACCAGTCCAGAACGAGGACGTGTAAAGCTAAACACTTAGTTTTCGTTTACAAAGTGTATTGAGTGGGTTTGTGTGGAgtcacacccacacacacacacacacacacacacacacacacacacactcatactcactCGTGTCTCCATCAGCGCTGCGCCAGAGGCGCGTTCACTGCAGCTCTGTGGAGCGCGCACGCTAGAGAGAGGGACGCGCTGCTGCGGCTCGGAACATCTTCACCGGCGTGATTCATGATCAAGtgttcaGGAGGAGCGGCGTTCGTCTCTCACCGTCGTCATGGCCTCGATATCGGAGTGGTACGCAGGGAAGAACGTGCTGATCACCGGAGCCACGGGCTTCATGGGGAAGGTGCTGGTGGAGAAGCTGCTGCGCTCCTGTCCCGACGCCAACGTCTACATCCTCGTCCCGCCCAAAGCCGGTCAGTCCATGTCCGAGCGCGTGCAGGACATGATGAAGTGTAAGctgTTTGACCGCTGCCGTGAAGATAATCCTGACTTTCATCAGAAGATCATCCCCATCAGCAGCGAGCCCATGCAGCCCGGCCTGGCCATCAGTCCAGAGGATGTACAAACACTCACTTCCTGTATTAACATCGCCTTCCACTGCGCCGCCACCATCCGCCTCGACGAGCCCCTGAAGCATGCTCTGCAGCTGAACGCCATCGCCACGCAGCAGCTCCTCTCTCTGGCGCAGCAGATGCAGCAACTGCAGGCCTTCATCCACATCTCCACCGCTTACGCCAACTGCAACTTGAGACACATCGACGAGGTCATCTACCCTCCTCCGGTCGAGCCCAAGAAGCTCATTGACTCTCTGGAgtggatGGATGAGAGTATTGTCCGTGATATCACGCCGCTGGCCTGATCGTGACCGCCGAACACTTACACCTTGCACCCAAAGCGCCGCGCGAGTGTGTGGCAGCAGGAGAGCGGTAAGCTCAACATCGGCATCATTCGCCGCCCATCGAGAGGAGCCAGCTGGCAGGAAACCTTCCCGTGAggTTGATAGATAAACTTTAATGGACTGAGTTTTGTGTGTCCCGGTGCAGGCTGGGGCGTATCCCGCGCACCATGAGAGCGGTGTAATGACGCCGTGGCCGATCTGATTCCTCTAGATGTCGTGATCAACCTGACGCTGGCTGCCGGCTGGTATACCCGGTGCAGCACCAAAACTGCGCTCGTGTACAACTGCACAACCGAGGCATTAATCCTTCCACTGGGAGAGATCGTGCAGCATCACGTGATGTCAACGCTTAAGAGGAATCCTGAACAGGCTTTCCGCCGCCCGAACGCCAACATCACCTCCAATTACCTGTTGATCAACTAGTACATCCTCACAGTCAGCAAGTTCCCTGCGCCATCTACGACCTGTTCCTCCTCCACTGTCAGACAGAAACTACAAATGATGCGTATTTTCAACCGCCTGCACAAAGCCATCGGTCTGCTGGAGTACTTCAGCAGTCAGGACTGGGAGTGGAACTCAGACAACATGAACATGCTGATGAGTCAGCTGAGTCCTCGTGATATTTCAGACCTTCAACTTGACGTCCGGCAGCTGAACTGGTCTGAGTACATCGAGAATTACTGCATCGGCACCAAGAAGTACGTCGAATCTAAGACATGTCCGACATTCCCGCCAGCCAGACAGCACCTGAGGAAGCTGAGAAACATCCGATACACATTCAACACGGTGCTGCTGGTGTTCATCTGGCGCTATCTTTTCATCGCCGCTCTCAGATGGCCACGGAACATCTGGTACTTTGTCGTGAGCTTGTGCTTCAAGTTCTGTCCTACTTCAGGCTTCAGCACTCTGACCCAATGA

Function

NR:

description
fatty acyl-CoA reductase 1-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36763 False 492 TUCP 0.59 3 56637 73486
XM_043236916.1 True 1928 mRNA 0.54 22 47610 73681

Neighbor

gene id symbol gene type direction distance location
cpsf6 cpsf6,LOC107729149,LOC108279496,LOC107555887,LOC107708007 coding upstream 1700 75381 ~ 86610 (-)
kcnc2 kcnc2,LOC107555885 coding upstream 62322 136003 ~ 171334 (-)
ccdc107 ccdc107,si:ch73-278m9.1,LOC107656458,LOC107729159,LOC107555866 coding upstream 103592 177273 ~ 184430 (-)
krr1 krr1 coding upstream 126130 199811 ~ 205364 (-)
phlda1 phlda1,LOC107708012,LOC107658781,LOC107656271,LOC107729151 coding upstream 176460 250141 ~ 252421 (-)
G24713 NA non-coding upstream 117715 191396 ~ 194159 (-)
G24712 NA non-coding upstream 132212 205893 ~ 208820 (-)
G24724 LOC107555883,LOC107708011,LOC107658963 non-coding upstream 138924 212605 ~ 213246 (-)
G24792 NA non-coding upstream 531202 604883 ~ 605114 (-)
G24795 NA non-coding upstream 538710 612391 ~ 612843 (-)
LOC122343420 wasla,LOC107753630,LOC107598884,LOC107659464,LOC107725914,LOC107658745,LOC107656407,LOC107698525,LOC107752346,LOC107575727 other downstream 13683 19991 ~ 33927 (-)
G24689 asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107711503 other downstream 36509 10833 ~ 11101 (-)
G24708 NA other upstream 112779 186460 ~ 191242 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other upstream 206317 279998 ~ 341953 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other upstream 332961 406642 ~ 496868 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other upstream 791003 864684 ~ 933108 (-)
G24875 NA other upstream 995479 1069160 ~ 1070096 (-)

Expression


Co-expression Network