G24811


Basic Information

Item Value
gene id G24811
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 864840 ~ 933111 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU36909
acacacacacacacatacacacacacacacacacacaatcagtctttttttatgctaattattattatttttttttaaatatgatctgGACTTGTTCTTGACAGGATTCATCCAAATATAATACCCTTTGCTTTTTGCAGAGCACATTATCCTGATTATGCCAACATGTTTAAAGCTACTTCAAGATATACCTGACATATTTAAGTCAACAAAAAAAGTCTTGCGTTTTTAATATTACTCGGTATGACTCTTTGTTTGAAGACACCAGGTTTATTATACACAGTGGGAATCATTTTAGAAAAGCTTGGTTTTACTATTTTCTATACTTACTGTTTCAAACTGtagaatcattattttttatgacaGACGTAATTACCGTAGTAAATACCCAATGTAAGAATAATGTGGCCAAACCGCCTCCTCTCTTGTATATatcggtgtgtgtttgttttgagagaGCTGGCTCCTTATTAGTGCAAACAGAGATCTGTTCTTATTTTTGTCTAATGCCCATTTTGTACCAACAGAAAATTCACTTATGTGTTACGTTCGACTGTCTCTGGCCTGTGTGTtgatatgcatatgtgtgtgtgtgtgtgtgtgtggtgcgaGTGCGTACAAACCTGTTTGATTGACAATACTTGCTAATTATAATTTCcttgatgtttttatgtatatctTGGGTCTCCCTTTTTATTTCAACCTCTTgggatattttaaaactaacacGACCGATGCCGTTTTGACAGCATATTAAAACAACGACAACAGTCCATCcttttttgctgaaatgttgttgttattattattattattatttcttttccttttttatggAATAGTGGAAAAGATGAAACCATTCCCTTTTATAGCTGCTGTAAGGACAGTAAACTGTTTCTCAATGCACTAGCCTTCAATCTAGTTATGAAATCACTTCATTTTGATGACAAGTTTAAAACTGTGTTAAGGAAAATTAGTgtgaaagtttaaataaaaagcaatatcaTACCAATTCG

Function

GO:

id name namespace
GO:0043254 regulation of protein-containing complex assembly biological_process
GO:0044087 regulation of cellular component biogenesis biological_process
GO:0051128 regulation of cellular component organization biological_process
GO:0022607 cellular component assembly biological_process
GO:0065003 protein-containing complex assembly biological_process
GO:0065008 regulation of biological quality biological_process
GO:0008154 actin polymerization or depolymerization biological_process
GO:1902903 regulation of supramolecular fiber organization biological_process
GO:0090066 regulation of anatomical structure size biological_process
GO:0051493 regulation of cytoskeleton organization biological_process
GO:0006996 organelle organization biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0043933 protein-containing complex subunit organization biological_process
GO:0007015 actin filament organization biological_process
GO:0032970 regulation of actin filament-based process biological_process
GO:0051258 protein polymerization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030832 regulation of actin filament length biological_process
GO:0030833 regulation of actin filament polymerization biological_process
GO:0030029 actin filament-based process biological_process
GO:0033043 regulation of organelle organization biological_process
GO:0034622 cellular protein-containing complex assembly biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0030041 actin filament polymerization biological_process
GO:0110053 regulation of actin filament organization biological_process
GO:0008064 regulation of actin polymerization or depolymerization biological_process
GO:0032535 regulation of cellular component size biological_process
GO:0032271 regulation of protein polymerization biological_process

KEGG:

id description
ko05321 Inflammatory bowel disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU36909 True 1016 lncRNA 0.33 2 864840 933111

Neighbor

gene id symbol gene type direction distance location
LOC122342832 NA coding upstream 1289 860596 ~ 863551 (+)
zdhhc17 zdhhc17,LOC107708015,LOC107658960,LOC107656450 coding upstream 503918 343592 ~ 360922 (+)
LOC122343357 LOC107658963,LOC107708011,LOC107555883 coding upstream 651681 205505 ~ 213159 (+)
glipr1a NA coding upstream 665304 195092 ~ 199536 (+)
frs2a frs2,frs2a,LOC107658966,LOC107590545,LOC107729158 coding upstream 757535 90208 ~ 107305 (+)
sypl1 sypl1,LOC107590538,LOC107658778,LOC107583939,LOC107656429,LOC107718552 coding downstream 935 934046 ~ 937823 (+)
atxn7l1 LOC107658944,LOC107705340,LOC107583941,LOC107656393,LOC107590536,LOC107718553 coding downstream 6049 939160 ~ 957350 (+)
znf800b LOC107658945,LOC107583943,LOC107711512,LOC107590539,LOC107656405,LOC107736565,LOC107705332 coding downstream 25223 958334 ~ 969359 (+)
grm8a grm8a,LOC107584025,LOC107658943,LOC107711511,LOC107656388,LOC107725917 coding downstream 37024 970135 ~ 1111519 (+)
waslb wasl,LOC107725914,LOC107658745,LOC107583945,LOC107656407 coding downstream 324622 1257733 ~ 1272088 (+)
G24768 LOC107718544,LOC107658747,LOC107590532 non-coding upstream 213247 649509 ~ 651593 (+)
G24758 NA non-coding upstream 239615 623251 ~ 625225 (+)
G24754 NA non-coding upstream 245144 619477 ~ 619696 (+)
G24751 NA non-coding upstream 248984 615600 ~ 615856 (+)
G24746 NA non-coding upstream 257326 607287 ~ 607514 (+)
LOC122342413 NA non-coding downstream 179784 1112895 ~ 1127380 (+)
G24925 NA non-coding downstream 353501 1286612 ~ 1287073 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding downstream 623281 1556392 ~ 1557778 (+)
G25071 NA non-coding downstream 755867 1688978 ~ 1693389 (+)
G25030 NA non-coding downstream 855520 1788631 ~ 1789276 (+)
G24771 plekha5,LOC107584023,LOC107658747 other upstream 199310 654092 ~ 665530 (+)
gpr22a gpr22a,LOC107658958,LOC107583929,LOC107729153,LOC107708019,LOC107590528,LOC107656448 other upstream 425488 434343 ~ 439352 (+)
G24632 LOC107584022 other upstream 490758 373527 ~ 374082 (+)
G24609 NA other upstream 569771 293235 ~ 295069 (+)
cmah cmah,LOC107555874,LOC107729160,LOC107656456,LOC107590555 other upstream 670657 184716 ~ 194183 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other downstream 312467 1245578 ~ 1249169 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other downstream 355186 1288297 ~ 1291224 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other downstream 396341 1329452 ~ 1331843 (+)
LOC122343488 NA other downstream 737401 1670512 ~ 1672959 (+)
LOC122342451 NA other downstream 851126 1784237 ~ 1788096 (+)

Expression


Co-expression Network