G24830


Basic Information

Item Value
gene id G24830
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 923639 ~ 926377 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU36944
gCCAACAATATTTATGgcagttttaatttctttgttgtCCAACATTAAACGAAAGGCAGAAAAATCAAACGAAGCCCTTTAAGTTTTTCCCTCATTAGCAACAGATAATAAACGATTCTTATTACAAATCACAGCAGCTCATCAGACTATATATTCCTACAATTAAAACAGGCACTTGAAATTTGTCTCACAATAAGTAGCTAAACTGACTTAAAATATGCAAGCTAGCACGATTAATACCGGATTCATCGGACTGATGGTCGCAAAGTGATTCAAACTGCTTTCTCGCATTGATCTGTGGGTTTTCTCCGTCTTCAGTGAGTAAACTTCATACAACATGTCATTAAGCCCCAAATCTGTCTTTGTGCTCAGATGTGCATCCTGCCATCAGAGATTAGCTTCAAACTGCCAGGGTCACTAGCGTGAGCGCCGGGTCACATGACTGTAAAGCCAAACTATAATGCAATGTGCCAGCATGTGACTCTCTCCACCCTCACAACACAAAGGACGAAGGAAAATTACCCATTTTACTCACcacgaagccatcctaggtgtacgactttcttctttcaaaagAACACAGACTGACTATCATACGTCGTATGCGGAGTCAGAAGTCAGCAGAGAAGCGTAACTATGTAACTAGTCACTTATTTAcgttattttaaaactagaacATTTTTTGACTGTGTTtgcctgaaagaagaaagtcgtgtacgcctaggatggcttcgggttgaactattcctttaaaagaagcttaaactaaatatttttttattatcagttaaATGTCGCCTTGCGAGTCTGAAAAAGTCTCCGAAACAGTGCAGTTATTCGTAAGCATCAGTGCCTTCTCATGGCCATCATAAAGGAAGCAGACACGTGTTTGCAATCACTGGAGAATAGATAGGTGGTGACAGTGTGTACTGAGAGCCAagggcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagggagagagagagagactaaatTTACCAGCTAAGCATGACAACATGTTTGCCACACATTCAAAGCCCTTTGAGTCATCTGTAAAAGAAGTCAAATAAAGCTGATTTGACTATACAAAAAGGCTCAAGATGCCAAGAGTGAAAGGAAAGTGATTGTTCCTTTGGTGACAGGTGTAGTATTTCGTGCCGACTGTACAGGTGCGGCTGGATGTCAGGCTGTCAGCGTGACTCAGCAGGTTTGGCACTAAATCCccagaagaaagtcatgtggcaagtcatttcacttttttgcGCAGTCCGTTACAGAGCGTTTGACAAGTCATCCGATCAGTCGTATGGAAAGTTTGGAAAACGCTGTAGTCATTACGGTGAGAAATGTAAACTGCACGCCTGATTATATATAATTCCTCTGAATTATGAACCAAAGGAAGATCACGCTGCCAGAATGGGCACCAAGCTGTTTACTAGTGATTCATGAATCTGTGTGTTCTGTGGATAATATAAAGTGCCTAATGAATCTAGACTATCACGACTGAATTATTCCTATTTAGATCTGCATGAATTATATTTTGGTATTTATATTTGGGGTCAATGCAAAtattatcaaaacaaaataagtgtGTATattctatacaaaaaaaaattcaacaggGTTAAAACCCCTTTATACTGGACCGATCCGTCCTAACTAGTACAGAATGGAAATGAAAGCATTAGATATGTATTCCCATGACAAGCTTATTCCTATGAAAATCTCATATACAGATAAAATTGAGAAGCAAGTCACTTTGGATTAGTGTTAAGTCGATGTAAATACGTTAAGGGCCGTGCCTCACCTCTACCCAGTTAGTGAGCCAGTAGCACTCTGGATCTGTGCTTTCTACGGTGAACAGCACATTCCCACGAGGGATAACGCTTCCCTCCGGCACAGCCTTGATCTCGATGGGCAGGTGACCGTTGTATTTCTGCAGTGATGTAACATAAAAGACGTGACTGAACATCCCTGATGGGACAAAACATTCAGCACAGACACCTCCGATAGTACCCTTCGTACCTCCAATATGTAATTCCATCCTTTTTCATTGAACACATCATCCTGAAAGTGCTCCCGGTACACCTCTTTTGCTTCCTGGATCTTCTCTCGTGTGACGACTTGTCCtgtgagcacaaaaaaaaaaaaaaaaaaagataggaCAACTGTGAGACAAGAGTATCGCACGCATCAAGGAAGTGGCTGAACTGTACTGTAGGATAAAAAGACATTATTCAAGAAAGAGTTTGGCGCGTGtccctgtttgtgtgtgtgtttaattgaaCATTTTCCTACATCCTCGCTTTATTACATTAAGGCACACTTCCTTGCTTACAGTGTACCTTTGTCCCACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36944 True 2559 lncRNA 0.42 2 923639 926377

Neighbor

gene id symbol gene type direction distance location
plekha5 plekha5,LOC107656381,LOC107718544,LOC107590532,LOC107658747,LOC107707963,LOC107584023,LOC106609184 coding downstream 149078 643448 ~ 774561 (-)
aebp2 aebp2,LOC107708024,LOC107658952 coding downstream 282914 629065 ~ 640725 (-)
pde3a pde3a,LOC107590531,LOC107656239 coding downstream 343294 500604 ~ 580345 (-)
cog5 cog5,LOC107583928,LOC107658957,LOC107656447,LOC107590548,LOC107729135,LOC106609192 coding downstream 474577 383479 ~ 449062 (-)
e2f7 e2f7,LOC107707966,LOC107658780,LOC107656240,LOC107576735,LOC107584022 coding downstream 540313 371870 ~ 383326 (-)
LOC122342410 NA coding upstream 189014 1115391 ~ 1120658 (-)
LOC122342412 NA coding upstream 196290 1122667 ~ 1125124 (-)
lmod2b lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding upstream 346929 1273306 ~ 1277391 (-)
asb15b asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding upstream 351633 1278010 ~ 1281707 (-)
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding upstream 404645 1331022 ~ 1344030 (-)
G24790 NA non-coding downstream 296706 626576 ~ 626933 (-)
G24802 NA non-coding downstream 299382 623329 ~ 624257 (-)
G24799 NA non-coding downstream 303051 620177 ~ 620588 (-)
G24796 NA non-coding downstream 309986 613127 ~ 613653 (-)
G24795 NA non-coding downstream 310796 612391 ~ 612843 (-)
G24863 NA non-coding upstream 27088 953465 ~ 957349 (-)
G24870 NA non-coding upstream 42097 968474 ~ 969351 (-)
G24874 NA non-coding upstream 141963 1068340 ~ 1068899 (-)
LOC122343365 NA non-coding upstream 203969 1130346 ~ 1132035 (-)
G24917 NA non-coding upstream 324555 1250932 ~ 1252579 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 426771 406642 ~ 496868 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 581686 279998 ~ 341953 (-)
G24708 NA other downstream 732397 186460 ~ 191242 (-)
si:dkey-97m3.1 NA other downstream 849958 47610 ~ 73681 (-)
LOC122343420 wasla,LOC107753630,LOC107598884,LOC107659464,LOC107725914,LOC107658745,LOC107656407,LOC107698525,LOC107752346,LOC107575727 other downstream 889712 19991 ~ 33927 (-)
G24875 NA other upstream 142783 1069160 ~ 1070096 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other upstream 362937 1289314 ~ 1323397 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 654103 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 667907 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 682983 1609360 ~ 1618298 (-)

Expression


Co-expression Network