LOC122343365


Basic Information

Item Value
gene id LOC122343365
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1130346 ~ 1132035 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU37028
CTGTCAGAGATTAGCGTGACAAACAAGAAGCTGCTGAACGTGTGAGTCCAGAGAGAAGTCGTCTTTGAATGTgAGCTGCTGGGGGTCACGAGAAGGATTCTTCAATGAGGGGAGCAATGGCTGATCCCTTATTTGCCTTTTGAACTTTTTCTGCATGCAGTGAAGTGCACTTTTCTGTCGTAGTGCACCTTCTGTTACAGAGGTTTTCGATCCTGTTTCTGGGCACCCACAGCGCTACACTTTTTGCATGTCTCCCTAATTTACACACCAGACCTAATTCAGATCATTAGGAAAGGGCTCCATGAACTGAAATGAGTGCGTCAGACGatggagacatgcaaaatgtgaatAGCAGTGGGTCCCCAGGATCAGGATTGAAAACCTCTGATCCTACAGCTCGGACCCATTCTATGGGTAAATGCTTTGATGGGCTATTTGTTTAAACGAGTGCCTTTCGTTACAGAATGAtcaatgcagtgtgtgtgtgcgcacaatAAAAGGGTAAATGTGACATTTGTGTGCTGTTTGATTTTCCAGATCTCATCTCGGTTCTGTGAACatttgccattatttttaatctgtagCTTAATCTTTCGAACAAGATTTTGGTGCATCTGACAAAATCAGAAGATTTGTCTTTGGATAAGATGCGAGTTGTAATTTTAAAGTTAGAATGATCAGTTTTAGCTCACGTTAATA
>XR_006250762.1
CACGGAGGACACGTCTGCAGTGGCATTTAGCGTGAAATGTtgctttcacacaaaaaaacatacattctCAGGAGCTTTTAGAAAAGTTCAACAGTCAACCAAAAAGTTTTACTTGACAACAGCGAGAAAGCAACCAGTCGACGGCTCTTTAGTTTAACTCTAGCATGCGGGTTTCCTGCAGTGACTGGTGTCTGTAAGATTATAATTCACATCTAAACAAAGTTCCTCTTAAGGTAATTCAGCAATTCGAGTTTAGGAGACATGATTAAAGTGGTGTGATGAGACTGACGACATGAAACTGCTTGTTTTATTCACCAGCTttgagttaaatatataaacactatatTTCTTTCAACACCGCGTTATACATTTAGTTTGCTCTTTTTAAATGCGTGTGACTGATATTTGTAATGgtattaaaaagttaatttttgcTTCATCACAGGTGGTTGAATTCAGCGGTGGGCAGGACTAACTCAAAAGCCATAACCCCATTGGTTGAGATGTGATTAATAGCCGACACCTGTCAGAGATTAGCGTGACAAACAAGAAGCTGCTGAACGTGTGAGTCCAGAGAGAAGTCGTCTTTGAATGTgAGCTGCTGGGGGTCACGAGAAGGATTCTTCAATGAGGGGAGCAATGGCTGATCCCTTATTTGCCTTTTGAACTTTTTCTGCATGCAGTGAAGTGCACTTTTCTGTCGTAGTGCACCTTCTGTTACAGAGGTTTTCGATCCTGTTTCTGGGCACCCACAGCGCTACACTTTTTGCATGTCTCCCTAATTTACACACCAGACCTAATTCAGATCATTAGGAAAGGGCTCCATGAACTGAAATGAGTGCGTCAGACGatggagacatgcaaaatgtgaatAGCAGTGGGTCCCCAGGATCAGGATTGAAAACCTCTGATCCTACAGCTCGGACCCATTCTATGGGTAAATGCTTTGATGGGCTATTTGTTTAAACGAGTGCCTTTCGTTACAGAATGAtcaatgcagtgtgtgtgtgcgcacaatAAAAGGGTAAATGTGA

Function

GO:

id name namespace
GO:0008406 gonad development biological_process
GO:0045137 development of primary sexual characteristics biological_process
GO:0007548 sex differentiation biological_process
GO:0061458 reproductive system development biological_process
GO:0048608 reproductive structure development biological_process
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function
GO:0030234 enzyme regulator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37028 False 699 lncRNA 0.42 2 1130346 1131512
XR_006250762.1 True 1034 lncRNA 0.42 2 1130534 1132035

Neighbor

gene id symbol gene type direction distance location
LOC122342412 NA coding downstream 5222 1122667 ~ 1125124 (-)
LOC122342410 NA coding downstream 9688 1115391 ~ 1120658 (-)
plekha5 plekha5,LOC107656381,LOC107718544,LOC107590532,LOC107658747,LOC107707963,LOC107584023,LOC106609184 coding downstream 355785 643448 ~ 774561 (-)
aebp2 aebp2,LOC107708024,LOC107658952 coding downstream 489621 629065 ~ 640725 (-)
pde3a pde3a,LOC107590531,LOC107656239 coding downstream 550001 500604 ~ 580345 (-)
lmod2b lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding upstream 141271 1273306 ~ 1277391 (-)
asb15b asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding upstream 145975 1278010 ~ 1281707 (-)
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding upstream 198987 1331022 ~ 1344030 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding upstream 336162 1468197 ~ 1473225 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding upstream 398757 1530792 ~ 1562547 (-)
G24874 NA non-coding downstream 61447 1068340 ~ 1068899 (-)
G24870 NA non-coding downstream 160995 968474 ~ 969351 (-)
G24863 NA non-coding downstream 172997 953465 ~ 957349 (-)
G24830 NA non-coding downstream 203969 923639 ~ 926377 (-)
G24790 NA non-coding downstream 503413 626576 ~ 626933 (-)
G24917 NA non-coding upstream 118897 1250932 ~ 1252579 (-)
G24924 NA non-coding upstream 153170 1285205 ~ 1285466 (-)
G24926 NA non-coding upstream 154524 1286559 ~ 1287065 (-)
G24927 NA non-coding upstream 155221 1287256 ~ 1287737 (-)
LOC122342498 si:ch211-258f14.2,LOC107658934,LOC107583952,LOC107726068 non-coding upstream 228001 1360036 ~ 1361863 (-)
G24875 NA other downstream 60250 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 197238 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 633478 406642 ~ 496868 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 788393 279998 ~ 341953 (-)
G24708 NA other downstream 939104 186460 ~ 191242 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other upstream 157279 1289314 ~ 1323397 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 448445 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 462249 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 477325 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 521556 1653591 ~ 1654826 (-)

Expression


Co-expression Network