G24998


Basic Information

Item Value
gene id G24998
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1408536 ~ 1410526 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU37184
GTTCAGTGGTTATGACCCTCTCAGGGTTTATTGCTCTTTAACAGCCGTGCATTATTCCTCTGTTGGTTCACCTGGTTCCCGCCGCTCTTGGGGTTGACGAACACCAGCACTGGTTTCATCAGCGGAGAGGGAAGCGGCTTCAGCATGAACGGACGCCACTTCGATTCCTGCAGAAGTCACACCGTTATACTTCAACAGACGCACattagaacacacacacacacacacacactccactgtGAGCTGAGGACAGATGATCACCGAGCAGGAGTTAAGGGAAaaaaggAGGGACTGGACAGGACTCTACTCACATCTGTCCCCTTTTTGCTGGCTCTTCTTTTGAACGACGTCCGTTTTTTCCGTCGAGTGGAGTTTTTAAATGAGCTCTGGGACACAGGAGAGAGACGCTGACTAAGCCAACACATACCAGAACTAACTCCAGCAAGACTAGGTTTAGTTCAAGTTTAACAATCATTACTAGAAATGTTTGGTTTTCAATTTAAGGAAAAGTTCATCCAAAAAGGAAAACACTCCCATGTTCCTCTGAACCTGTTGATGAAGAATCCAGCTGTAAATACTTCTCTTTGGCAACTAAAGCAAACCCTGACAGCTGTCCAACTGCAAGGATAAAACATCTTCTGAAGTCATACAATGAAGAAAACACCAAAACTGACTCATTGATATTGTATGGAAAAGTAAGCATActgcaaaacatattttatattgaagaataaaaagtcatattggttcagaatgacatgaagatgagaaaataataaaaaaaattccttggttgaactattccaaaaaaactttgaataaaagcaagGAACTTCCCTTTGAGCAACTCCTGAATTGAAAGCAGCAGTTCAATGCCGCGTTTCAAAAACCTGCCCCATCGATGCATATATCCACCAATACGATGGGTCAGGTTTTGAATTCAATTCTGGCAACAGATAAACTGTGATGTTAAAAGTTTACattgcaaaatgttttgttttgtttttacaccaaGTATTTTTGTCGTGATTTCCACTGGAAATAATTCTTAGTCTAACATTTTTTCacaagaaatttttttttaaaatgatggcttttttttttgatatatctCACAACTGAACGTTTATATCAAGCAATTCTGTCTTATGTCAGATTTCTGATTTTgtatcttataaaaaaaaattaagaggttattgcaactttttatctcacacttGCAATTCTAAATTTAAACTTTGCAAGAATGGACATAATCTCAGTActacaataaaacactaaatcaagatacatttacttaagataagaagtttgtttattaaaaatataccaaaatgAAGTAAATTTCTGCTTAAAAATCTGTCAAAGTGGTAAGAAAAATAagtttgaattgaattaatttttttttgccccaTTGGCaggatttatattatatatatatattacagaatttatattatatatattattactgttaatattatcattaagaAAACAAGACTTTCTATCTTAAGTCATTCTGCTTCTCATGCAAATGTTTCTTAATTTCAGAACATTTAGacatttgtactgtaaaacaagacaaaaatactgagtaagaagtcatttttgcagtgtatgaaagaatgaaagaagcTCCATATAAAATATGTAGACGGGTTTTATGAAACACACTGCTACTGATATCAAATCTCGCAGCATCAAAGCGTATTTAAGCCGAAGCCGATCAGCGTAAGTGAGTGCAGAAGACAAGATCATACAGCCCAGCTTCGAAACGCAGTCTAGTGTCGCCTTGCATTAGCATCTCCCGCAGGACTTTACATAAACTCAGAAAAAAGTGAACGTACCTGTGGTTTTCTGACTTTGATGATCCAGGAAGGGGGTACGATGACCCCGGCGTGAGCTCCTAGAGAACAGGGCTCCTCGATCTGATGCAGCATGAAGCA

Function

GO:

id name namespace
GO:0045202 synapse cellular_component
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU37184 True 1946 lncRNA 0.37 3 1408536 1410526

Neighbor

gene id symbol gene type direction distance location
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding downstream 64506 1331022 ~ 1344030 (-)
asb15b asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding downstream 126829 1278010 ~ 1281707 (-)
lmod2b lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding downstream 131145 1273306 ~ 1277391 (-)
LOC122342412 NA coding downstream 283412 1122667 ~ 1125124 (-)
LOC122342410 NA coding downstream 287878 1115391 ~ 1120658 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding upstream 57671 1468197 ~ 1473225 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding upstream 120266 1530792 ~ 1562547 (-)
LOC122342888 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding upstream 177753 1588279 ~ 1591305 (-)
LOC122342889 NA coding upstream 180863 1591389 ~ 1593369 (-)
LOC122342781 selenoo,LOC107579553,LOC107711487,LOC107725908,LOC105900684 coding upstream 191149 1601675 ~ 1603713 (-)
LOC122342498 si:ch211-258f14.2,LOC107658934,LOC107583952,LOC107726068 non-coding downstream 46673 1360036 ~ 1361863 (-)
G24927 NA non-coding downstream 120799 1287256 ~ 1287737 (-)
G24926 NA non-coding downstream 121471 1286559 ~ 1287065 (-)
G24924 NA non-coding downstream 123070 1285205 ~ 1285466 (-)
G24917 NA non-coding downstream 155957 1250932 ~ 1252579 (-)
G25001 LOC107726026,LOC107658929,LOC107656386 non-coding upstream 7660 1418186 ~ 1420262 (-)
G25019 tbc1d30,LOC107725910 non-coding upstream 68083 1478609 ~ 1480893 (-)
G25027 NA non-coding upstream 159767 1570293 ~ 1575419 (-)
G25028 NA non-coding upstream 165535 1576061 ~ 1576716 (-)
G25098 NA non-coding upstream 166675 1577201 ~ 1577725 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other downstream 85139 1289314 ~ 1323397 (-)
G24875 NA other downstream 338440 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 475428 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 911668 406642 ~ 496868 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 1066583 279998 ~ 341953 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 169954 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 183758 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 198834 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 243065 1653591 ~ 1654826 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other upstream 487877 1898403 ~ 1902663 (-)

Expression


Co-expression Network