G25001 (LOC107726026,LOC107658929,LOC107656386)


Basic Information

Item Value
gene id G25001
gene name LOC107726026,LOC107658929,LOC107656386
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1418186 ~ 1420262 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU37187
atgacaaataaatatcgacaagaacaaaaaatagacctatatcattttattttagtgtaaactgtataaataaattcataatattactttatattatatatgcataatctatctatctataaccgaactatttaaataaaatataaatataaattctatattcaatttatattatattaactcTGATTATAAATACAAAGCATTTCTTCGTCTGATTGGTGTAAAATAAGAGCAGAAactattatattgtttttcatttcatgttgattttaagATGAACTGTGAGCCGAGTGTAAAAGACAAACACTCATGAGTGAGGGCCCTCGACTCACACAGATAcacaccgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtacttacacAGAGAAGGAGTCTGGGGGAGCAGAGAGGCGGCGCAGGTCGGCTGCGCACACTTTCTGAATGCTGCTTCAGAGCAGCCACACGGGAACAGCACAGCCAAGCCAGTCagcacagagacacagagacagagacagagagacggagaggtGACAGACACACGCGTGAAGGGCGGCCGGTAAttaagacaaagaaagaaaaagaaagaaaagcccACTGAGAGCAGCACAGAAAGCAGAACCAGCACATGTAGATTAGATCAAGCACACACACTGTTAGACTGTTAGTTACACACACTaacatctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcttttttaaatgcaccattgtttgaattaaaacgtatttagtagtgctgtcaaatgattaaatcactttttttgcttgcatgatatatgtgtgtgtactgagtttatttattatgcatatataaattcacgcccatgcatgtatatatttaggacaaaatatgttatgtttatatattaaatatatttataatataatataaattatagcaatataaacatgtaaatacatgcacatattttcaaaatatatactgtatgtgtgtgaatttatatGTGCTACTAAAAAATagacacacctacacacacaaacacattttttgttgctacaaattaaatatgtttggtatattattttttgtaataataataatatacctACTAGTAATcataatcaaaacaacaaatgtttcttgagcagcaaagcagcatattaatattatttctgaaggatcgtgtggcactggagtaataatgatgaaaattcagatttgatcacagaaataaattacattttaaaattatattcagaTAGAAGAAAGTTAttcaaaactgtaataatatattttacaaaactctttattttttattgtattgtatgcagtcttttctttaaataagaaatgatcTTATCGACCCcaagctttttaattattattttaaataagtgttccattgatgtatggtttattaggataggactatttgaaaatatggaatctaaatattgaaaaaaaaaatcagttcttAGTAAGTTCTTAGCAATATATATTGCggaaaaccataaaaacataactaaTAGCAGAGACAGGACCCCTGCAGACCCTCACAGCAGTGGAGGAGTAAGAGCGCACGCAGCAAAACAAGAACAACTCTCTAAATCTATGAAACGGCAGACTGAGGAGCCGGGACTCACTCGTTGAGCAGCGGCACAGACGTGCGTCTCTTGCTCTTCTGCACCATGTTGGCCTGGTTCCTCAGAGAGATGCGGAGCGTGGAGGGCGCGAGGCGGCATGGCTCCCCGTCCACCTGCACCGGCAGGGTCTTGAAGGTGCTGAGGACCACCTCCCTGCACTGATGCAGCCGCTCGCCGTGACCTCCCACCTGCAGCGCCGCCTTGAGGAGAAgacgacacacaca

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: diacylglycerol kinase iota-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37187 True 1857 lncRNA 0.36 2 1418186 1420262

Neighbor

gene id symbol gene type direction distance location
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding downstream 74156 1331022 ~ 1344030 (-)
asb15b asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding downstream 136479 1278010 ~ 1281707 (-)
lmod2b lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding downstream 140795 1273306 ~ 1277391 (-)
LOC122342412 NA coding downstream 293062 1122667 ~ 1125124 (-)
LOC122342410 NA coding downstream 297528 1115391 ~ 1120658 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding upstream 47935 1468197 ~ 1473225 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding upstream 110530 1530792 ~ 1562547 (-)
LOC122342888 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding upstream 168017 1588279 ~ 1591305 (-)
LOC122342889 NA coding upstream 171127 1591389 ~ 1593369 (-)
LOC122342781 selenoo,LOC107579553,LOC107711487,LOC107725908,LOC105900684 coding upstream 181413 1601675 ~ 1603713 (-)
G24998 NA non-coding downstream 7660 1408536 ~ 1410526 (-)
LOC122342498 si:ch211-258f14.2,LOC107658934,LOC107583952,LOC107726068 non-coding downstream 56323 1360036 ~ 1361863 (-)
G24927 NA non-coding downstream 130449 1287256 ~ 1287737 (-)
G24926 NA non-coding downstream 131121 1286559 ~ 1287065 (-)
G24924 NA non-coding downstream 132720 1285205 ~ 1285466 (-)
G25019 tbc1d30,LOC107725910 non-coding upstream 58347 1478609 ~ 1480893 (-)
G25027 NA non-coding upstream 150031 1570293 ~ 1575419 (-)
G25028 NA non-coding upstream 155799 1576061 ~ 1576716 (-)
G25098 NA non-coding upstream 156939 1577201 ~ 1577725 (-)
G25124 NA non-coding upstream 240343 1660605 ~ 1661388 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other downstream 94789 1289314 ~ 1323397 (-)
G24875 NA other downstream 348090 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 485078 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 921318 406642 ~ 496868 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 1076233 279998 ~ 341953 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 160218 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 174022 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 189098 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 233329 1653591 ~ 1654826 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other upstream 478141 1898403 ~ 1902663 (-)

Expression


Co-expression Network