selenoo2 (selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485)


Basic Information

Item Value
gene id selenoo2
gene name selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1594284 ~ 1604690 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU37323
AATTTTTGAAGCATAAATTTCATCTGAATTTTATGATAGTAACAGTATAGAACCTCCTGTCCATATAAATCTATGTATAGTTCTAATATAATGAGCTGAACATGATTTCACATATATTTGGATTGAAAAGGAAACTACGgccgaatgctgttcattgacttcagttcagcatttaacaccatcatccctcagcagCTTATAGAGAAGCtctgaacacctctctctgtaactggatcctggactttctgacacGCAGACCTCAATCAGTccggatcgggaacagcatctccagcaccaccacactgaacactggagatcctcagggctgtgtgctcagtccactgctgttcactttgctgactcacgactgtgcagcgatgcacagctccaatcacatAATCAGATTCGCTGATGACACgaccgtggtgggtctcatcagcaagaacgacgagtcagcatacagCGATGATATGCAGCAGTTTTCAACatggtgtagagccaacaatctatctctgaatgtCGACAAGACcaaggagatgattgttgacttcaagcgagcaaagagtgac
>XM_043236889.1
ATGGCCCAAAGTGTCACACCACTGCAAAGACTGAAGTTTAACAATGTTGCATTGAAAAAACTCCCTCTAGATTCGTCACTAGAACCGGGCTCACGGATCGTGGCAGGAGCGTGTTTTTCCCGTGTCCAGCCACAGCCGCTGCTCAACCCAGCTTTCGTCGCCATATCCGAGCCGGCTCTCGCTTTACTGGGACTGAGTGTGGACGATGTTTTACCTGACCCACACGGGGCGGAATATCTGAGCGGCTCTCGGATGATTCCGGGCTCCGAGCCCGCTGCTCACTGCTACTGTGGACACCAGTTTGGCCAGTTCGCCGGGCAGCTGGGTGACGGTGCTGTGTGTTATTTGGGGGAGGTGGAGGCCGGTGCTGAGCAAAGTTCTGACCCGACCAAGAGAACCCCTTGTGGCCGGTGGGAAATTCAGGTTAAAGGCGCTGGGCTGACACCTTATTCTCGGCTGTCTGATGGGCGTAAAGTGCTCCGCTCCAGCATTCGAGAGTTCCTGTGCAGTGAGGCCATGTTTGCACTGGGAATTCCCACAACACGAGCAGGATCACTGGTGACCTCTGATCTTTATGTCCAGAGGGATACGTTCTACAGTGGCAATCCCAGACCAGAGAGGTGCTCAGTGGTTCTCAGAATAGCACCCACCTTTATCAGATTTGGCTCGTTTGAGATCTTTCACCCTGTGGACGACTTCACTGGAAGACATGGCCCGAGTGTTGGACGACCTGACATCCGAGCACAGCTTCTGGATTATGTCATTGAAACATTCTACCCTGAGACACAAATAAGATATTTAGACCGCCTAGAGAGGAATGCTTCCTTCTTCAGAGAGGTGACCGTGAGGACCGCCAAACTGGTTGCCCTGTGGCAAAGTGTGGGATTTTGTCATGGAGTTCTCAACACAGACAACATGAGCATCTTGGGCCTCACTATAGACTACGGCCCATTTGGCTTCATGGACAGGTTTGACCCTGAGTTCGTGAGCAATGCCTCTGATAAGAAACAGCGTTACTCTTATGAAGCTCAGCCATATATATGCCGCTGGAACTTGGCACGTTTGGCAGAAGCTCTTGGCTCGGAGCTCCAGTCATCCAAAGCAGGGGCCATGTTAGATGAGTTCATGACCATTTATCAGGACTTCTACATGTACAACATGAGGAAGAAGCTGGGTCTTCTGAGACAACAAGAAGCAGAGGATGTAGAACTGGTGGCGGATTTATTAAAGACCATGCACATCACAGGTGCCGACTTCACAAACACATTTCGTCTGCTGAGTGCTGTGTCCTGTCCTATAGGTGAACAGAAAGACAGCACAGACTCAGTAGTGGAACTGATCATGGAACAGTGTGCCTCGCTGGAGGAACTAAAGCACGTTGCAAGAAAGGCAAGGCAAGAGAATTGTGAGTTGGAGATGATTCTGTCCATGGCTGACACAAATCCAGGTATGTTTAACATGGTAGCTAATCAGCCAGAGGTTGCCAAACAACTGGAGAAGATTGGCAGGCTGAAGGAGCTTTTCACGATCAATGAGGCGGAGCTAAAAGTCAAGCAGATAGATCACTGGCAAAGATGGGTCAAACTATAcagGAGACGTCTGGCCCGTGAATGTGACGCAGCAAGTGACCCTGCAGAGGTAGAGAAAGAGCGGGTCGAAACTATGAACTCCACTAATCCTGCCATTGTGCTGCGGAATTACATTGCCCAGAATGCAATTGAAGCTGCTGAAAAGGGGGATTTTTCAGAGgTTCAACAGCTGCTTAAGGTTTTAGAGAACCCTTATTTGTTCAGTCGAGATCTGGAGCATCAAGTATGGTCAGCAGGAATTGGTTCAGACCAAGCTGATGGCAACAGCATTAAGAGACAAGAAGTTAAGgagaacacaaaaagaaaagcagcaacTGATACGCACCAGATACCATACAACAGTAAACCTCCATCATGGGCTAGAACgatctgtgtcacatgatcatccTAAAGCCTCCCAAACATCACAGCCCAGTCCAAAACAGAAAGCTTAAGCAACACACAGCACTCCATATCAGATAAAGCGGAAATGTCTAGATGTTAATAGGTATAATAAACAAGGCATAATTTctgttcaattaaaaatatgttttattactaTGAAATTGAGAAACagattaaattattcatattttaattaacctttagttatttttgcaatatCTGATTAATGAAGACTCTGATGTTCAGCTTAGCAGGCCTGTCTGAGTTTGAATAACAAGGAGTGTCTTGTGCATCATATAACCACATATCTTTAATTATTACCCATCAATTTTAATAGATATTTCAAAACGTAATAGCTTAAACAAAGTATTATGTAGAAATATGACAAAATGTCCAagactttttttctgcaaacattaaaaatggttttcttgtttctattttttaaatcttggtAAACACTATAAAAGTAGTCTATAAAAGTCTTCTGAAAACTTCCATAATAAATTTAGTGAGtggcatatttaattaaaaagagatatatgaaatgcaaataCACTTAGccacaaataagtaaatcaTTTCTGTGGATTTTGTTTCTACttacaatatttgaaataaatgttcacttaatgtcatgttttttgcctccacaattttatttcatgtgaTTATGAACAAATAGTTAAATTTTTGAAGCATAAATTTCATCTGAATTTTATGATAGTAACAGTATAGAACCTCCTGTCCATATAAATCTATGTATAGTTCTAATATAATGAGCTGAACATGATTTCACATATATTTGGATTGAAAAGGAAACTACGgccgaatgctgttcattgacttcagttcagcatttaacaccatcatccctcagcagCTTATAGAGAAGCtctgaacacctctctctgtaactggatcctggactttctgacacGCAGACCTCAATCAGTccggatcgggaacagcatctccagcaccaccacactgaacactggagatcctcagggctgtgtgctcagtccactgctgttcactttgctgactcacgactgtgcagcgatgcacagctccaatcacatAATCAGATTCGCTGATGACACgaccgtggtgggtctcatcagcaagaacgacgagtcagcatacagCGATGATATGCAGCAGTTTTCAACatggtgtagagccaacaatctatctctgaatgtCGACAAGACcaaggagatgattgttgacttcaagcgagcaaagagtgaccatCCTCCGCTGTCTATTGCGGATCCAGGGTGGAGACTGTCAggagcaccaaattccttggtgttcatctggtggataacttcacctggtcactcaacaccagctccatcaccaagaaaacCCAGCAGTGCCTCTACTtcctgaggaggctgaggaaagctcatctccctccacccatcctgactatgtttTATAGAgggaccattgagagcgtcctgtgcagctgcatcactgcctggtttgggaattgcagTGAATCGGATCACAAGACCCTTCagaggatagtgaggacagcttAAAAGATCACtggcgtctctctgccctcaCAGACATCTACACCACACACTGCATCCACAAAGCGCACAATATAACACATGACCCTTCACACACACTATTCAGAGGACATCCGTTTACAAGTACTTTGAATTATTCATCC
>XM_043236890.1
GTCACCGGTTGTAAAGAAATGTACCAATTTATATCTTTGTAAGTGATTAAAGTGAGCATAGCTATATGTAAAGCCCAGCTTTGTACAATCAAACAGTGCAACAGCAAATACACATTAGTAGAAAGCAGAAGACATCGAGAGAAAAAGTGAAGATTCGTCACTAGAACCGGGCTCACGGATCGTGGCAGGAGCGTGTTTTTCCCGTGTCCAGCCACAGCCGCTGCTCAACCCAGCTTTCGTCGCCATATCCGAGCCGGCTCTCGCTTTACTGGGACTGAGTGTGGACGATGTTTTACCTGACCCACACGGGGCGGAATATCTGAGCGGCTCTCGGATGATTCCGGGCTCCGAGCCCGCTGCTCACTGCTACTGTGGACACCAGTTTGGCCAGTTCGCCGGGCAGCTGGGTGACGGTGCTGTGTGTTATTTGGGGGAGGTGGAGGCCGGTGCTGAGCAAAGTTCTGACCCGACCAAGAGAACCCCTTGTGGCCGGTGGGAAATTCAGGTTAAAGGCGCTGGGCTGACACCTTATTCTCGGCTGTCTGATGGGCGTAAAGTGCTCCGCTCCAGCATTCGAGAGTTCCTGTGCAGTGAGGCCATGTTTGCACTGGGAATTCCCACAACACGAGCAGGATCACTGGTGACCTCTGATCTTTATGTCCAGAGGGATACGTTCTACAGTGGCAATCCCAGACCAGAGAGGTGCTCAGTGGTTCTCAGAATAGCACCCACCTTTATCAGATTTGGCTCGTTTGAGATCTTTCACCCTGTGGACGACTTCACTGGAAGACATGGCCCGAGTGTTGGACGACCTGACATCCGAGCACAGCTTCTGGATTATGTCATTGAAACATTCTACCCTGAGACACAAATAAGATATTTAGACCGCCTAGAGAGGAATGCTTCCTTCTTCAGAGAGGTGACCGTGAGGACCGCCAAACTGGTTGCCCTGTGGCAAAGTGTGGGATTTTGTCATGGAGTTCTCAACACAGACAACATGAGCATCTTGGGCCTCACTATAGACTACGGCCCATTTGGCTTCATGGACAGGTTTGACCCTGAGTTCGTGAGCAATGCCTCTGATAAGAAACAGCGTTACTCTTATGAAGCTCAGCCATATATATGCCGCTGGAACTTGGCACGTTTGGCAGAAGCTCTTGGCTCGGAGCTCCAGTCATCCAAAGCAGGGGCCATGTTAGATGAGTTCATGACCATTTATCAGGACTTCTACATGTACAACATGAGGAAGAAGCTGGGTCTTCTGAGACAACAAGAAGCAGAGGATGTAGAACTGGTGGCGGATTTATTAAAGACCATGCACATCACAGGTGCCGACTTCACAAACACATTTCGTCTGCTGAGTGCTGTGTCCTGTCCTATAGGTGAACAGAAAGACAGCACAGACTCAGTAGTGGAACTGATCATGGAACAGTGTGCCTCGCTGGAGGAACTAAAGCACGTTGCAAGAAAGGCAAGGCAAGAGAATTGTGAGTTGGAGATGATTCTGTCCATGGCTGACACAAATCCAGGTATGTTTAACATGGTAGCTAATCAGCCAGAGGTTGCCAAACAACTGGAGAAGATTGGCAGGCTGAAGGAGCTTTTCACGATCAATGAGGCGGAGCTAAAAGTCAAGCAGATAGATCACTGGCAAAGATGGGTCAAACTATAcagGAGACGTCTGGCCCGTGAATGTGACGCAGCAAGTGACCCTGCAGAGGTAGAGAAAGAGCGGGTCGAAACTATGAACTCCACTAATCCTGCCATTGTGCTGCGGAATTACATTGCCCAGAATGCAATTGAAGCTGCTGAAAAGGGGGATTTTTCAGAGgTTCAACAGCTGCTTAAGGTTTTAGAGAACCCTTATTTGTTCAGTCGAGATCTGGAGCATCAAGTATGGTCAGCAGGAATTGGTTCAGACCAAGCTGATGGCAACAGCATTAAGAGACAAGAAGTTAAGgagaacacaaaaagaaaagcagcaacTGATACGCACCAGATACCATACAACAGTAAACCTCCATCATGGGCTAGAACgatctgtgtcacatgatcatccTAAAGCCTCCCAAACATCACAGCCCAGTCCAAAACAGAAAGCTTAAGCAACACACAGCACTCCATATCAGATAAAGCGGAAATGTCTAGATGTTAATAGGTATAATAAACAAGGCATAATTTctgttcaattaaaaatatgttttattactaTGAAATTGAGAAACagattaaattattcatattttaattaacctttagttatttttgcaatatCTGATTAATGAAGACTCTGATGTTCAGCTTAGCAGGCCTGTCTGAGTTTGAATAACAAGGAGTGTCTTGTGCATCATATAACCACATATCTTTAATTATTACCCATCAATTTTAATAGATATTTCAAAACGTAATAGCTTAAACAAAGTATTATGTAGAAATATGACAAAATGTCCAagactttttttctgcaaacattaaaaatggttttcttgtttctattttttaaatcttggtAAACACTATAAAAGTAGTCTATAAAAGTCTTCTGAAAACTTCCATAATAAATTTAGTGAGtggcatatttaattaaaaagagatatatgaaatgcaaataCACTTAGccacaaataagtaaatcaTTTCTGTGGATTTTGTTTCTACttacaatatttgaaataaatgttcacttaatgtcatgttttttgcctccacaattttatttcatgtgaTTATGAACAAATAGTTAAATTTTTGAAGCATAAATTTCATCTGAATTTTATGATAGTAACAGTATAGAACCTCCTGTCCATATAAATCTATGTATAGTTCTAATATAATGAGCTGAACATGATTTCACATATATTTGGATTGAAAAGGAAACTACGgccgaatgctgttcattgacttcagttcagcatttaacaccatcatccctcagcagCTTATAGAGAAGCtctgaacacctctctctgtaactggatcctggactttctgacacGCAGACCTCAATCAGTccggatcgggaacagcatctccagcaccaccacactgaacactggagatcctcagggctgtgtgctcagtccactgctgttcactttgctgactcacgactgtgcagcgatgcacagctccaatcacatAATCAGATTCGCTGATGACACgaccgtggtgggtctcatcagcaagaacgacgagtcagcatacagCGATGATATGCAGCAGTTTTCAACatggtgtagagccaacaatctatctctgaatgtCGACAAGACcaaggagatgattgttgacttcaagcgagcaaagagtgaccatCCTCCGCTGTCTATTGCGGATCCAGGGTGGAGACTGTCAggagcaccaaattccttggtgttcatctggtggataacttcacctggtcactcaacaccagctccatcaccaagaaaacCCAGCAGTGCCTCTACTtcctgaggaggctgaggaaagctcatctccctccacccatcctgactatgtttTATAGAgggaccattgagagcgtcctgtgcagctgcatcactgcctggtttgggaattgcagTGAATCGGATCACAAGACCCTTCagaggatagtgaggacagcttAAAAGATCACtggcgtctctctgccctcaCAGACATCTACACCACACACTGCATCCACAAAGCGCACAATATAACACATGACCCTTCACACACACTATTCAGAGGACATCCGTTTACAAGTACTTTGAATTATTCATCC

Function

symbol description
selenoo Enables protein adenylyltransferase activity. Involved in protein adenylylation. Located in chromosome and mitochondrion.

NR:

description
PREDICTED: selenoprotein O-like isoform X2

GO: NA

KEGG:

id description
K08997 SELENOO, selO; serine/tyrosine/threonine adenylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
TU37323 False 569 lncRNA 0.44 1 1594720 1595288
XM_043236889.1 False 3666 mRNA 0.45 10 1594284 1600604
XM_043236890.1 True 3748 mRNA 0.44 12 1594284 1604690

Neighbor

gene id symbol gene type direction distance location
LOC122342889 NA coding downstream 915 1591389 ~ 1593369 (-)
LOC122342888 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding downstream 2979 1588279 ~ 1591305 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding downstream 31737 1530792 ~ 1562547 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding downstream 121059 1468197 ~ 1473225 (-)
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding downstream 250254 1331022 ~ 1344030 (-)
apex1 apex1,LOC107658891,LOC107725930,LOC107583973,LOC107656416 coding upstream 14287 1618977 ~ 1621881 (-)
si:ch211-214j24.10 si:ch211-214j24.10,LOC107725935,LOC107711484,LOC107583983,LOC107656420,LOC107579683,LOC107658903 coding upstream 20605 1625295 ~ 1628655 (-)
si:ch211-214j24.14 LOC107658910,LOC107579438,LOC107725940 coding upstream 50346 1655036 ~ 1658265 (-)
LOC122343486 LOC107583996,LOC107725944,LOC107658917,LOC107579452,LOC107656399,LOC107579492 coding upstream 61955 1666645 ~ 1670146 (-)
LOC122343487 LOC107583996,LOC107658917,LOC107725944,LOC107656399,LOC107579452,LOC107579492 coding upstream 70512 1675202 ~ 1678612 (-)
G25098 NA non-coding downstream 16559 1577201 ~ 1577725 (-)
G25028 NA non-coding downstream 17568 1576061 ~ 1576716 (-)
G25027 NA non-coding downstream 18865 1570293 ~ 1575419 (-)
G25019 tbc1d30,LOC107725910 non-coding downstream 113391 1478609 ~ 1480893 (-)
G25001 LOC107726026,LOC107658929,LOC107656386 non-coding downstream 174022 1418186 ~ 1420262 (-)
G25124 NA non-coding upstream 55915 1660605 ~ 1661388 (-)
G25125 LOC107583967,LOC107658918,LOC107725927,LOC107656410,LOC107711479 non-coding upstream 57655 1662345 ~ 1662607 (-)
G25126 cecr1b,LOC107656410,LOC107711479,LOC107583967,LOC107725927,LOC107581132 non-coding upstream 58383 1663073 ~ 1663900 (-)
G25127 NA non-coding upstream 61148 1665838 ~ 1666137 (-)
G25133 NA non-coding upstream 83668 1688358 ~ 1688894 (-)
LOC122342802 LOC107711465,LOC107656235 other downstream 8095 1580480 ~ 1586189 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other downstream 270887 1289314 ~ 1323397 (-)
G24875 NA other downstream 524188 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 661176 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 1097416 406642 ~ 496868 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 4670 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 48901 1653591 ~ 1654826 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other upstream 293713 1898403 ~ 1902663 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other upstream 438263 2042953 ~ 2088579 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other upstream 486661 2091351 ~ 2097801 (-)

Expression


Co-expression Network