G25871


Basic Information

Item Value
gene id G25871
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4176254 ~ 4176625 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU38429
cacacacacacacaattcttatttaaataatttcttttaattaaaaattgtacCAAGACTTAGACACAATGAACCAACTCTGATCATGCACTTTTGTAAAGCCACACAATGTAttacaaaacttaaaaatagaaaatgacatAAGTGCTGGCTAGGTCGAAGAGCTGTCAGTACGCGTACACCTTCACTTTATGGACCTCTCGATCTTCACACTCCCTCTTTCTGTTATAGTAGTAAAAGGTGTTATCCCGACGCTGAAGCTTCTTCACAAACCCAGTGTCCGGCCAACGGTCAATCTGAAAAGACAGCACAAGCATATTCAATAGAAAAACATTGAAATTATAAACTGTAAGCTGTAATTAGGTATTAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38429 True 372 lncRNA 0.37 1 4176254 4176625

Neighbor

gene id symbol gene type direction distance location
dclre1c dclre1c,LOC107725954,LOC107581292,LOC106595997 coding downstream 1062 4170681 ~ 4175192 (-)
cdnf cdnf,LOC107726000,LOC107744152,LOC107592258,LOC107658837,LOC107656217,LOC107581044 coding downstream 11518 4162439 ~ 4164736 (-)
LOC122343333 tymp,LOC107725998,LOC107580729,LOC107743597 coding downstream 43387 4128140 ~ 4132867 (-)
si:ch73-139j3.4 LOC107658832,LOC107725999,LOC107592219,LOC107580782 coding downstream 51425 4121442 ~ 4124829 (-)
kics2 si:ch211-125a15.1,LOC107592225,LOC107658829,LOC107726025,LOC107743608,LOC107580661,LOC107656252 coding downstream 129963 4040892 ~ 4046291 (-)
tspan9b LOC107658833,LOC107725884,LOC107656293,LOC107580843,LOC108428166 coding upstream 61160 4237785 ~ 4246176 (-)
stab2 LOC107658796,LOC107592196,LOC107745005,LOC107743929,LOC107565662,LOC107656211 coding upstream 143486 4320111 ~ 4346912 (-)
wnt16 wnt16,LOC107745023,LOC107592255,LOC107658764,LOC107656279,LOC107744098,LOC107565671 coding upstream 173466 4350091 ~ 4356250 (-)
cped1 cped1,LOC107658798,LOC107745002,LOC107743276,LOC107656212,LOC107565663,LOC107592240 coding upstream 180631 4357256 ~ 4403590 (-)
ing3 ing3,LOC107745003,LOC106576172,LOC106609303,LOC107658800 coding upstream 227798 4404423 ~ 4412492 (-)
G25853 LOC107725886,LOC107592223,LOC107658822 non-coding downstream 69995 4102730 ~ 4106259 (-)
LOC122342502 NA non-coding downstream 390534 3775440 ~ 3785720 (-)
G25739 NA non-coding downstream 405925 3770121 ~ 3770329 (-)
G25732 NA non-coding downstream 434449 3710024 ~ 3741805 (-)
G25731 NA non-coding downstream 468360 3707589 ~ 3707894 (-)
LOC122342390 NA non-coding upstream 10342 4186967 ~ 4188728 (-)
LOC122342421 NA non-coding upstream 16934 4193559 ~ 4195145 (-)
LOC122342441 NA non-coding upstream 20220 4196845 ~ 4198357 (-)
LOC122342416 NA non-coding upstream 23180 4199805 ~ 4201576 (-)
LOC122342442 NA non-coding upstream 26398 4203023 ~ 4204779 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other downstream 14426 4133977 ~ 4161828 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other downstream 557887 3602356 ~ 3618367 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other downstream 574263 3601000 ~ 3601991 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other downstream 599131 3534662 ~ 3577123 (-)
LOC122342805 NA other downstream 1154742 3019092 ~ 3021512 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other upstream 88301 4264926 ~ 4267495 (-)
LOC122343492 LOC107743325,LOC107580925,LOC107658806,LOC107656283,LOC100330186,LOC107744995 other upstream 554599 4731224 ~ 4757827 (-)
LOC122343483 LOC107571041,LOC107724548,LOC107658713,LOC107704613,LOC107739149,LOC107589471 other upstream 908465 5085090 ~ 5094640 (-)
G26405 tnnt2c,LOC107560724,LOC107655611,LOC107725585 other upstream 1542387 5719012 ~ 5720250 (-)
G26408 NA other upstream 1553393 5730018 ~ 5736946 (-)

Expression


Co-expression Network