G25880 (LOC107658814,LOC107726023,LOC107592209)


Basic Information

Item Value
gene id G25880
gene name LOC107658814,LOC107726023,LOC107592209
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4264926 ~ 4267495 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU38442
ACAAGGAATAGGTCAGAGTTTAATCTCTGCCGACTGGAAGCGAGAAGAGCTACATTCAGATGTATACTGGCGGAGTGAGCTCATTGGCTCAGCAgatagccaatcagattcagagTCAGCAGGATCAAGCTCCCAAGCTCCTTCAAAGGAGGGAGTTGGGCTCTCAGAAGGAGTTTCCTGTGAACATGGGAGGCAGCGATGTGTGTTATTTCTGCAGCCGTCGCGTTTATGTCATGGAAAGGCTGAGCGCAGAGGGAAAGTTCTTCCACAGGAGCTGCTTCCAGTGCGATCACTGCAGCACCACATTACGCCTCTCTAACTACGCTTACGACCAGCTACatggGAAGTTTTACTGTAAGCACCACTTCAGCTACAGAATGACCAGCGTGGCTCAGAGAAAGAGACCGGCCCTTCCTGTGGCCCCTCGACCTACTCAGG

Function

NR:

description
PREDICTED: protein-methionine sulfoxide oxidase mical3b isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38442 True 438 TUCP 0.52 4 4264926 4267495

Neighbor

gene id symbol gene type direction distance location
tspan9b LOC107658833,LOC107725884,LOC107656293,LOC107580843,LOC108428166 coding downstream 18750 4237785 ~ 4246176 (-)
dclre1c dclre1c,LOC107725954,LOC107581292,LOC106595997 coding downstream 89734 4170681 ~ 4175192 (-)
cdnf cdnf,LOC107726000,LOC107744152,LOC107592258,LOC107658837,LOC107656217,LOC107581044 coding downstream 100190 4162439 ~ 4164736 (-)
LOC122343333 tymp,LOC107725998,LOC107580729,LOC107743597 coding downstream 132059 4128140 ~ 4132867 (-)
si:ch73-139j3.4 LOC107658832,LOC107725999,LOC107592219,LOC107580782 coding downstream 140097 4121442 ~ 4124829 (-)
stab2 LOC107658796,LOC107592196,LOC107745005,LOC107743929,LOC107565662,LOC107656211 coding upstream 52616 4320111 ~ 4346912 (-)
wnt16 wnt16,LOC107745023,LOC107592255,LOC107658764,LOC107656279,LOC107744098,LOC107565671 coding upstream 82596 4350091 ~ 4356250 (-)
cped1 cped1,LOC107658798,LOC107745002,LOC107743276,LOC107656212,LOC107565663,LOC107592240 coding upstream 89761 4357256 ~ 4403590 (-)
ing3 ing3,LOC107745003,LOC106576172,LOC106609303,LOC107658800 coding upstream 136928 4404423 ~ 4412492 (-)
kcnd2 kcnd2,LOC107658801,LOC107744998 coding upstream 165412 4432907 ~ 4539791 (-)
LOC122342442 NA non-coding downstream 60147 4203023 ~ 4204779 (-)
LOC122342416 NA non-coding downstream 63350 4199805 ~ 4201576 (-)
LOC122342441 NA non-coding downstream 66569 4196845 ~ 4198357 (-)
LOC122342421 NA non-coding downstream 69781 4193559 ~ 4195145 (-)
LOC122342390 NA non-coding downstream 76198 4186967 ~ 4188728 (-)
LOC122343408 NA non-coding upstream 23874 4291369 ~ 4293402 (-)
LOC122343317 NA non-coding upstream 26896 4294391 ~ 4296316 (-)
LOC122343364 NA non-coding upstream 29727 4297222 ~ 4299283 (-)
LOC122342525 NA non-coding upstream 32683 4300178 ~ 4302283 (-)
LOC122342466 NA non-coding upstream 38412 4305907 ~ 4308145 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other downstream 103098 4133977 ~ 4161828 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other downstream 646559 3602356 ~ 3618367 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other downstream 662935 3601000 ~ 3601991 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other downstream 687803 3534662 ~ 3577123 (-)
LOC122342805 NA other downstream 1243414 3019092 ~ 3021512 (-)
LOC122343492 LOC107743325,LOC107580925,LOC107658806,LOC107656283,LOC100330186,LOC107744995 other upstream 463729 4731224 ~ 4757827 (-)
LOC122343483 LOC107571041,LOC107724548,LOC107658713,LOC107704613,LOC107739149,LOC107589471 other upstream 817595 5085090 ~ 5094640 (-)
G26405 tnnt2c,LOC107560724,LOC107655611,LOC107725585 other upstream 1451517 5719012 ~ 5720250 (-)
G26408 NA other upstream 1462523 5730018 ~ 5736946 (-)
G26414 LOC107560737,LOC107690649,LOC107757234,LOC107589816,LOC107694311 other upstream 1582909 5850404 ~ 5853366 (-)

Expression


Co-expression Network