G25892


Basic Information

Item Value
gene id G25892
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4299667 ~ 4300306 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU38457
GAGTCCCAATTAATGTAGTGATGTGTGCAGtaagggttttgttttttgttttttttaaatcatgtactctgaacttttcttttcacaggGTCTCCTTCAAATTTCTGGTTTTAATTCATACGGTTTCGTAGTTTTTAAAATTCGGTGTGCACAGCTtttttcaagagtgaaaactgaacGCAGAGTTGcttcattcatctctttttttttttttttttttttttttttttaccattttgctcaacagaaaatgattttcaggtgCATGTGCTTTAAGGTGCTTTGCTTAATTGAGCGTGTGACAAAGACTGCAACGCCCAAAGACATAtgatgcataataaacaaacagagctcaCAACCTTCAGCGTTTGTatgtctttttccatttaatttgtgctttgagcagggcagttatttgaaacattgcacTTGGATGCTTAAGACGCGACAGAGAGGATTCAAACGATTCCACAGCTTGCGcatgatgtgctgctttcagctgtcGGAGGAGGGTCATGGCATCCACTGGAAATCACTTGATGCTCGTCTTCTTCCTttcgcaaaagacaaaacagatccacCTTAACGTACTTCAGTCTGAACACGAAAAAGGAAGGGTggcatcattgaaaatgagtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38457 True 640 lncRNA 0.38 1 4299667 4300306

Neighbor

gene id symbol gene type direction distance location
tmem243b tmem243b,tmem243,LOC107592214,LOC107744120,LOC107580823,LOC107656297 coding upstream 119350 4176998 ~ 4180317 (+)
meig1 meig1,LOC107592215,LOC107725971,LOC107581293,LOC107658840,LOC107744135 coding upstream 123057 4175425 ~ 4176610 (+)
hspa14 hspa14,LOC107658827,LOC107592213,LOC107580804,LOC107656298 coding upstream 128978 4164737 ~ 4170689 (+)
lsm8 lsm8,LOC107592220,LOC107580766 coding upstream 172860 4125348 ~ 4126807 (+)
kitlgb LOC107725965,LOC107580747,LOC107656304,LOC107658725 coding upstream 178360 4115466 ~ 4121307 (+)
tspan12 tspan12,LOC107592202,LOC107658802,LOC107656244,LOC107565667,LOC107744106 coding downstream 114839 4415145 ~ 4429395 (+)
adm2a LOC107592207,LOC107743397,LOC107726065,LOC107580886,LOC107656286 coding downstream 516742 4817048 ~ 4827652 (+)
fbxo18 LOC107743400,LOC107658809,LOC107656287,LOC107581284 coding downstream 532104 4832410 ~ 4840605 (+)
glt8d2 glt8d2 coding downstream 541387 4841693 ~ 4847744 (+)
ttc41 LOC107656216,LOC107743954,LOC107581281 coding downstream 553759 4854065 ~ 4861148 (+)
G25846 NA non-coding upstream 46388 4252949 ~ 4253279 (+)
LOC122342475 NA non-coding upstream 72436 4224583 ~ 4227231 (+)
G25827 NA non-coding upstream 167115 4132108 ~ 4132552 (+)
G25825 NA non-coding upstream 169245 4130144 ~ 4130422 (+)
G25824 NA non-coding upstream 170039 4129339 ~ 4129628 (+)
G25889 NA non-coding downstream 22600 4322906 ~ 4323300 (+)
G25927 NA non-coding downstream 81869 4382175 ~ 4382506 (+)
G25939 NA non-coding downstream 130472 4430778 ~ 4431088 (+)
G25940 NA non-coding downstream 131317 4431623 ~ 4431958 (+)
G25941 NA non-coding downstream 132299 4432605 ~ 4435637 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other upstream 64423 4232908 ~ 4235244 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other upstream 68575 4229629 ~ 4231092 (+)
G25551 NA other upstream 561073 3737502 ~ 3738594 (+)
G25514 NA other upstream 797573 3481629 ~ 3502094 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other upstream 992909 3119515 ~ 3306758 (+)
G25958 NA other downstream 249857 4550163 ~ 4628899 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other downstream 629165 4929471 ~ 4944880 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other downstream 1054026 5354332 ~ 5397886 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other downstream 1481638 5781944 ~ 5862313 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other downstream 1562301 5862607 ~ 5898827 (+)

Expression


Co-expression Network