G25941


Basic Information

Item Value
gene id G25941
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4432605 ~ 4435637 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU38522
tctgaataaaaataagggTAGATAAAGATAATAGTGAGTTTAAAATAGCCTGTGAcgtaattgcaaaataaaagtcatgatATGGAGTAATGTTGTCAGATACAACTACTTGATATTTCTCGTAACTGCAACTTACAACGTTATATTTGACAGAGTGGCTATTCCTGTAATTTTGACCTTTTCTATTTGTTGCAGCTGAAGTTTGGGAttgcaattcagattttttttttcttgaagttTAAATTAGAATTTCCTTCTTTCAATAAtgaattaagattaataaaatgatcacaACACCATTGTcttttttatctgtattttaataGGACAATgaattaattctatttattcATAGACACTGCACCGGACTAAACAActggtttgtatttttttcattgtttttcaataattcatatattttaatgtccATAACACAAGCTGTAACAAATTCCAAAGGATCGTCATCACCTGGTAGTcgtttaaatgtacattatagCACAAACAGGAAGTCTGTTCTAAAAGTCCCTTGTGGATcccgaaaaaaaaagaagaaaaaaaaacaaaaaacagacacGTTCTTTGTGAATCTGTGAGCGCATGCACTCAGTCAATCCTGTCCTccaaacaggaaaaaataaaataaaatatccaaaCCTAAACAGATGGTCCAGCCTTTGCAGTCGTTGATTTAGAAAGTAAAATGTGAGACATTAATTTTGCTGTCCATTGAAATTaggagaaaagaagaaactGTAATAAACTTCACTACACCGAAGAACAAATTTACAGCACAGGTGCACTAGCAACACTCTCTCgtagttttctgttttcatcttttcttttttgtattttacaactgaaatacatttataatatataatcaacaccatttgagttttaaaaatatgcatttgtgaGATTCTATTCCCCCGGTAACCCTTTTAATACAAAGCATATCTTTACAAAAAGAATCTTGTTGCATAAGTCACATGGTAAAGCAAGAATGGGTGCAGGCATTGAGCAAGagggcagtggtgtgtgtgtgtgtatgtgtgtgtgtgtattgagcAAGGCGCATTAAGAGCTCCTCACCACAAATTGCACTGACATCGGtataaaaaatatcaacattataGACTATTTTCTTGCTAAATCCAGACATGAAATGGCAGAGAAGAGAGGTTTAATCTTTCAGgtgcagatattttttttttttacactttttgattaataataatacattttggatGAATCTCACAGACATATTTCTgtccaaaatcaaaataaattatattttgcttatacaaattttaaacagattttgtGCATTACTTTCTTGACAATTAAGCACGACGCCCCCCAAAACGTGTCATTACTGTGATgccaaaatacaaattttttttgtactatcaTTCTGAAGCATTATATATTTGCCTTTTGTTTGTATTATAGTAACGAAAATAACCATTGAGAAGGAGaatactaaaaaactaaaacaaattacGGTAATAGGAATTTGCATGGAGCAGAGTGCTGTTTTTAacgttatttttaaaacaagcaaagtATAATTCACTCTCTTTTGCTTTTGGATTGAAATAAACCTGAACGTGACTTTGTGAGATTCGCGTTTTTAAGTTCAACACTAAACGTCTTCGGCTGATCACAATGATATAATAATCTCCAAAACAGCACTAGGAATCTGAGTGGATGATTCTCAACTTGATGCCGTTATCCGGAAATAATAGAATATTTGCTGATAAAAGTACATCTTTAAAGGGAGGGACGGAAAAATAAGAACTCGGAAAAAATGTCCTGGTCGGGCTCTATGCTCTGGTCCACGCTGGCCCATTTCACCATGTGTACGACAACATGCACAATAATTTTAACGAAGATAATAAATAAGCacgttatttttcttttcacagttaGCTCGCAAACTTTGGAGTATAAAACGGAATGGCTAGTATTAGAGCTCAAGTCCACAAGCCTCcactttcaaatatattaaaacacaaaaggcGTTTCCTTTTCCATTTAGCTTTTTgccaccaaaaataaaaagaaggaTAACAAACATCTCATCAGGCCAGGCAAGGAGTGAACGCAACATGGGTGggacagagagagtgtgagacAGGATTTTCTCCATTTATCACCTGTATCAACAGGGCAATCTctcaaaacagctgttttcacaCACTTGTTGGGTTGGAAAGATCTATAACTAGGCAAAAGTAAAAAGCACACATTCTGACAGAAAGAGCCAATCCTTATTGCTCATGccgaattaaaaaaagacaaagacttACGCAAAACATGCAAGAGATCGAACTCgatcacacacgcacgcacgcaaaAGCATCCGACCGCACACTCTAGTAGAGCCCAGCTTTACTTTGAAGTATCAAAAGTGTGTGTATAGCTGTCTAAAAGTTTGTAAAATCCCGCCCCTGCTGGTACACTCCTTATTCGTCCCAAAATCTGGCGATCCCATCATATTGAAGACAACAGATTCAAAGACTCAcaatactgaaaaaattataGAAGCTGTAACAACCACAATGGTCATTGTTTTCCTTTATGGGTTGAGTAAAAGCCTATTGGACCCCAGCGTGAGTCACATGACGTATGGACCTAGAGGTGGAGCTGATGGAGCTCACAGAGACGGAGGGCTCTGGGCGggagctgattaaaaaaaaaaggtccagcTATGGCCCATCCTGCTGCAATGCCTCCTCCACAACACTAGGGGGCTCTGTCGATCCTTCCGCTCCAGCGTCCACTCGCTAAGTAAAACGGCTAATGGTCACGGCGGACGGTCTATAACGCCGACACCCTGACAATGTTGCTTTGCAAGAAGTCGGGCGAGCTGGCCGAGTCTCCGCCCTCGGGCGTGGTCACGGGCGGGGTGGGCATGCTGATGACAGCGGCAGTGATGTAGGACTGCTCTTCCGAATTCAGGGGTACTGTCTCCTCAAACTTGGCATTGAGACTGGAGCGGCTGTGTtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38522 True 3012 lncRNA 0.38 2 4432605 4435637

Neighbor

gene id symbol gene type direction distance location
tspan12 tspan12,LOC107592202,LOC107658802,LOC107656244,LOC107565667,LOC107744106 coding upstream 3210 4415145 ~ 4429395 (+)
tmem243b tmem243b,tmem243,LOC107592214,LOC107744120,LOC107580823,LOC107656297 coding upstream 252288 4176998 ~ 4180317 (+)
meig1 meig1,LOC107592215,LOC107725971,LOC107581293,LOC107658840,LOC107744135 coding upstream 255995 4175425 ~ 4176610 (+)
hspa14 hspa14,LOC107658827,LOC107592213,LOC107580804,LOC107656298 coding upstream 261916 4164737 ~ 4170689 (+)
lsm8 lsm8,LOC107592220,LOC107580766 coding upstream 305798 4125348 ~ 4126807 (+)
adm2a LOC107592207,LOC107743397,LOC107726065,LOC107580886,LOC107656286 coding downstream 381411 4817048 ~ 4827652 (+)
fbxo18 LOC107743400,LOC107658809,LOC107656287,LOC107581284 coding downstream 396773 4832410 ~ 4840605 (+)
glt8d2 glt8d2 coding downstream 406056 4841693 ~ 4847744 (+)
ttc41 LOC107656216,LOC107743954,LOC107581281 coding downstream 418428 4854065 ~ 4861148 (+)
parp12b parp12b,LOC107726044,LOC107592257,LOC107743438,LOC107658812,LOC107656291,LOC107581297 coding downstream 425691 4861328 ~ 4867182 (+)
G25940 NA non-coding upstream 647 4431623 ~ 4431958 (+)
G25939 NA non-coding upstream 1517 4430778 ~ 4431088 (+)
G25927 NA non-coding upstream 50099 4382175 ~ 4382506 (+)
G25889 NA non-coding upstream 109305 4322906 ~ 4323300 (+)
G25892 NA non-coding upstream 132299 4299667 ~ 4300306 (+)
G25981 flncb,LOC107592205 non-coding downstream 253738 4689375 ~ 4690783 (+)
G25976 LOC107743325,LOC107658806,LOC107580925 non-coding downstream 295200 4730837 ~ 4743603 (+)
G26008 NA non-coding downstream 330227 4765864 ~ 4767821 (+)
G26043 NA non-coding downstream 545572 4981209 ~ 4994260 (+)
LOC122343429 NA non-coding downstream 547584 4983221 ~ 4985211 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other upstream 197361 4232908 ~ 4235244 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other upstream 201513 4229629 ~ 4231092 (+)
G25551 NA other upstream 694011 3737502 ~ 3738594 (+)
G25514 NA other upstream 930511 3481629 ~ 3502094 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other upstream 1125847 3119515 ~ 3306758 (+)
G25958 NA other downstream 114526 4550163 ~ 4628899 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other downstream 493834 4929471 ~ 4944880 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other downstream 918695 5354332 ~ 5397886 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other downstream 1346307 5781944 ~ 5862313 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other downstream 1426970 5862607 ~ 5898827 (+)

Expression


Co-expression Network