G26085


Basic Information

Item Value
gene id G26085
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4889441 ~ 4892707 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU38730
TTTTATgttaattatcattaaaaaataaataattactggCTTATAGTTTTTGTCCTAAATTGTAACTATCAGAGAATCCTTACAATATAATCCATATATTACTAAAGATTATATTAAGCAATACaaaattgatttatatttaatttacttttgctTATTGCTTAACTGAAACTGTAAGAGTAACagataaagaaacagaaacttCTCATACTCACCACTTCAGGTTCCCGTAGTTCTCCTTCAGGTAAGGAGGCGCCATTCATCCTCGCGATCCAGTTAAGTGTTGACATGGCTCCTTGTACATTGCCTGCTGAGACCTGGAACCGTGCAGACTCGGGAATAaactaaaaaaggaaaagaaagagctTAAAGGCAAGTGAGTCAAAGACAAACATCTGCTTCCGTTTCTAAAACCATTTAGACGAAACTCACCATGAAGAGTCCAATGAGAATGATGCTGGGGATTATAGAAAAACGGATCATCCAGCGCCAACCCATTGTAGGCACCACTGTCATACCgagaataataataagcataGAACCCAGCATCCAGAAGACCTGTCGACCAATCACAGGTAAGGTCAGAATTAAAGGTTTCCCAATTGAAGGTCAAACGTAACTTCACATTTTGCACTCACCGCGGCAAGAGGCAGCAGAAAAGCTCTGTATTTGGCTGGGATGAATTCAGTCTTCAAAACAAACCTTTAGAGAGGAAATAGCAGAGAATTAGAGGAATAATTCATTGCATTGGAATGATTTactaatgaatcattcaaagcTATTTTGAACCAGTTTGTGAACCAATTTatgaaagaaaagataaaaataaagttgcaatGCCATTGCAGTCCACGGTTCTTTacagaaccatctctttcttacctttttataatgtgaagaaccttttttcacCACCTTTTATGAAGTTCTTTATTGATCCGTTTAGACAGATCAATGGcattgtgaagcacctttattttttaacagtgaaCTTGCTCACATATAAATGTTTCTATGCCTTACAAGTCTAATAACAAAAAGCCAAAACTGATAGGTGTacttgtataaatatatgtgacTTATATCACACAATATCACCCTTGAGATGTTGCTGCAACACCACAGCCCACCATACAGCGCAGGAAGATGAACCATCCATACGATGGAGAGAATGAAGTGAGCAGAGAAAAATACGATGCCCATATAAAGCCTCCAAACACCACCtgtgcacaaaaacaaatgtatttaatctaatttatcaTAATTATCCGTCAAATGAAACATCGCCTGACCTTCCAACGTCCATATTTGTCGGCAACATAACCACAGAGGACGCCACAGACCATGAAACCGAGGAACACCATCTGAAatcatgcacaaacacaaacaaagtaaGGCcgtaatttattattcatgcatTCTTTAGAAAAAAGTGTGCGCAATGCATTTTTACGCACTAGatttcatttgcatataaatctAGGACACAAGGAAGCTTTTAACATGAAATACACCTTACATCACCTTTAAAAAAGGTCAACCAAACTAGTCAGACGGTCACATGCGCGCACCTCGCACCACAACATTCCATTCCTGTCAAACTTCAGAgcgaaaacaaaataaagggcTCTGATTGGACGATCTCCTCACCGTGGAGACAAGGGCCACCTGCCAATCCTCTAGACGCCATTCGCAGCGGATCTCAGGAGAAACCACAGCCAACAACATGATCTCCATTGCCTCCACTATCTACACACACAGCACATCAACAATAAAATGAGTGAACAGAACAAAAAACGCAGCGGTTAATTAAGTACAGAGATGCGCTTTTCTTACATTGGCACTACCCATGATGACAAAAAGCAATATGTGGAAGCGTCCGAAGCCAATGCTCTCCACAGCCTCCTCCACGGTGTAGCATTTTGGTTCTGTTTGGGCTATAGAGGTCAAAAATCACTTGAGGCGATTGGACGCTACTTGACTGCTCACGAGTAGAGTAGTATAAACGCAAGCGCTTTGGCTTAGCTGTTTTGTTTGTACGTTCTTCACCTTTGGCCTCAGCAGCTTCGGCATGTGTGCTATTACTGCTACTTGTGTTGatctcctcctccagctccacTTCCTGAAGCTGGATGGCATTGACCAGCTGGGTCTTCATGGAAGACGAGCGCTTTAATGCCATCCTGTTTAAAAAGTCTACTTATTTCCTGAATAGTAGGCACTGAAAAGTGAAGTATAACATCGGATGATGAAGTGAGGTAATCAAACACGATGCTCCGTCACGTCGACCCTTTTCCCATCGCGTCCCATCCAGGTGGACACTTTTTAGTTATGCCGTACTTCCCCCCGCAAGAATTCCCGTATGTTGTGCCAAAAAGCTTTCAGCGATTTATGCAAATCAGTCTCGCAGAGAGCTGATAAAATAACTCCGGCGGGTTTTTAAACTATAAACCCAATCGGTATCTATCACGAATGTCCTAAAATCCAACTTCAGTCTCTGTATAGATGTTAATACTCCCTTTGGAAAGATGCATCATCAACCTCTCCGGCAGTAACACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38730 True 2561 lncRNA 0.40 2 4889441 4892707

Neighbor

gene id symbol gene type direction distance location
hsp90b1 hsp90b1,LOC107658810,LOC107726017,LOC107656288,LOC107743417 coding downstream 35767 4847862 ~ 4853674 (-)
sbf1 sbf1,LOC107592206,LOC107743344,LOC107656285 coding downstream 78352 4765856 ~ 4811089 (-)
trnay-gua_1 NA coding downstream 124274 4765080 ~ 4765167 (-)
naf1 LOC107744994,LOC107658765,LOC107592256 coding downstream 124445 4760704 ~ 4764996 (-)
LOC122343386 si:dkey-153k10.9,kiaa1324l,LOC107658817,LOC107656294,LOC107743973 coding upstream 54010 4946717 ~ 4957809 (-)
ppfibp1a LOC107658795,LOC107592195,LOC107745009 coding upstream 117164 5009871 ~ 5023591 (-)
LOC122343475 LOC107656210,LOC107739149,LOC107704613,LOC107733017,LOC107745022 coding upstream 184945 5077652 ~ 5083675 (-)
LOC122342827 LOC107745014,LOC107571041,LOC107745015,LOC107656208,LOC107743921,LOC107656210,LOC107565660,LOC107571048,LOC107704613 coding upstream 207657 5100364 ~ 5102901 (-)
LOC122342833 LOC107656209,LOC107724548,LOC107658713,LOC107656210,LOC107704613,LOC107739149,LOC107658717,LOC107758320 coding upstream 210306 5103013 ~ 5194668 (-)
G26074 NA non-coding downstream 30595 4858641 ~ 4858846 (-)
G26062 NA non-coding downstream 48281 4840334 ~ 4841160 (-)
G26071 NA non-coding downstream 50710 4838341 ~ 4838731 (-)
G26070 NA non-coding downstream 51812 4837007 ~ 4837629 (-)
G26069 LOC107592242,LOC107658809 non-coding downstream 52585 4836416 ~ 4836856 (-)
G26100 NA non-coding upstream 27866 4920573 ~ 4928705 (-)
G26109 NA non-coding upstream 51421 4944128 ~ 4946061 (-)
G26121 NA non-coding upstream 115919 5008626 ~ 5008998 (-)
G26225 LOC107715531,LOC107690654,LOC107715130,LOC107574393,LOC564807,LOC107577060,LOC564948 non-coding upstream 229765 5122472 ~ 5122750 (-)
G26226 NA non-coding upstream 231361 5124068 ~ 5124515 (-)
LOC122343492 LOC107743325,LOC107580925,LOC107658806,LOC107656283,LOC100330186,LOC107744995 other downstream 131614 4731224 ~ 4757827 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other downstream 621946 4264926 ~ 4267495 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other downstream 727613 4133977 ~ 4161828 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other downstream 1271074 3602356 ~ 3618367 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other downstream 1287450 3601000 ~ 3601991 (-)
LOC122343483 LOC107571041,LOC107724548,LOC107658713,LOC107704613,LOC107739149,LOC107589471 other upstream 192383 5085090 ~ 5094640 (-)
G26405 tnnt2c,LOC107560724,LOC107655611,LOC107725585 other upstream 826305 5719012 ~ 5720250 (-)
G26408 NA other upstream 837311 5730018 ~ 5736946 (-)
G26414 LOC107560737,LOC107690649,LOC107757234,LOC107589816,LOC107694311 other upstream 957697 5850404 ~ 5853366 (-)
G26462 NA other upstream 1014048 5906755 ~ 5913538 (-)

Expression


Co-expression Network