G26196


Basic Information

Item Value
gene id G26196
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 5204113 ~ 5205305 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU38876
ACCAGAACATGTCAGTCCCACATTGTTGTCTTGAGAGCACTGTATGTCCCTTGAAGTTGGACACAATCTAATGGTTGATTCATCTCCTCTGCACTGAATCTCTCGTGTCCACATCTGAGTGTCTCCTTTGTCAAAAGCAGCTTCTCTCAGCACCTGTACAGGAGCCCCACAGTCCAGCTCTCTACACACAACCTCTGCATCCTGCTGGTCAAAGACAGACTCACACACTGACATCCACGACTGATCATGAAGTATCTCTAACCTCCCAGAGCACAGGTGAGGTCCATCAGCAAGTCTGGCAAATCGTCCATAGTTTATGGTTTCTAAGTATTTGGAGAATACATAAAGCCAGTTTTACTGTGAGTGAATGAACCCGTCTTACTTTGAATGtgttacaaacaaacaataactgAATGTTTAAGTCTATTGTTTGATtgaattaatattgaaaaaaagaaagaaacaaataaaaaatggattttaaaaaactatttcacaaTTACTTGTAAGTTTATCGTTTATACCTAgtttagaaagaaaatgtattaaattattctaCATTGCATATGTTGGGTTAAGAGAAGAAAGGTTAATAAGTGATTAAATGATGAGGTACATAAAATTGCTTACCTGAGCATCTGACTCCAGCATCAGAATTATGATTGTTACACCTGTATGGATCATACCATCCATCTGATCTACAGTCCTTTAATGAAGACTCTGATCCTTTACACTGCACATACCTTAGGATTTTTCCTGATCCTTTTCCAAAGTAAGAATTCCATGTTGCTTGTAAAGCCTCTCCACAGCTCATCTCTCTACACACCACTGCAGCATCAGTCATATCCCAGTCATAATCACACACTGTTCcccactgaccatcatgaagAACCTCCACTCGACCAGAACAGAGACTGTCTCCATTCACCAGCCTCACACTCACACTGTCTACACTAGCTGTAATAAACGTAACCAATGAAGACAATAAAATAAGTGTCAGACAGCTCTTCATCTTGTTTTCTTGATGAATGTTTC

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase zeta-like

GO:

id name namespace
GO:0042613 MHC class II protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38876 True 1035 lncRNA 0.39 2 5204113 5205305

Neighbor

gene id symbol gene type direction distance location
ccdc59 LOC107548114,LOC107739147,LOC107656276,LOC107745010 coding upstream 31703 5170750 ~ 5172410 (+)
syt10 syt10,LOC107744086,LOC107658793,LOC107656242,LOC107745011,LOC107565666,LOC107592193 coding upstream 135248 5053790 ~ 5068865 (+)
dmtf1 dmtf1,LOC107658823,LOC107726036,LOC107743449,LOC107656295,LOC107580832 coding upstream 238916 4958676 ~ 4965197 (+)
LOC122343293 LOC107658814,LOC107726023,LOC107592209,LOC107656292 coding upstream 275411 4894882 ~ 4928702 (+)
LOC122343294 svopl,LOC107725968,LOC107658766,LOC107744112,LOC107656247 coding upstream 309378 4889423 ~ 4894735 (+)
cracr2ab cracr2ab,LOC107690648,LOC107742178,LOC107560738 coding downstream 11154 5216459 ~ 5224944 (+)
tspan11 tspan11,LOC108279944,LOC107720401,LOC107593980,LOC107560736,LOC107694254 coding downstream 34098 5239403 ~ 5254016 (+)
sema3aa sema3aa,LOC107562295,LOC107694310,LOC107757236,LOC107655621,LOC107560735 coding downstream 51099 5256404 ~ 5344872 (+)
ankrd16 ankrd16,LOC107754065,LOC107594131,LOC107694253,LOC107560709 coding downstream 193028 5398333 ~ 5400913 (+)
trnay-gua_2 NA coding downstream 193575 5398880 ~ 5398967 (+)
G26156 LOC107715531,LOC107690654,LOC107715130,LOC107574393,LOC564807,LOC564948,LOC107690650 non-coding upstream 81359 5122473 ~ 5122754 (+)
G26155 LOC107571045,LOC107575733,LOC107575819,LOC107690650,LOC107574392,LOC107656209,LOC107574393,LOC107743912,LOC107724548,LOC107577060 non-coding upstream 85871 5117982 ~ 5118242 (+)
G26148 NA non-coding upstream 92484 5111364 ~ 5111629 (+)
G26145 LOC107690655,LOC107573509,LOC107758319,LOC107574392,LOC107589730,LOC107575819,LOC107658713 non-coding upstream 99772 5104031 ~ 5104341 (+)
G26133 NA non-coding upstream 121827 5082057 ~ 5082286 (+)
G26314 NA non-coding downstream 299767 5505072 ~ 5505372 (+)
G26318 NA non-coding downstream 303998 5509303 ~ 5509795 (+)
G26324 NA non-coding downstream 308251 5513556 ~ 5513972 (+)
G26325 NA non-coding downstream 309047 5514352 ~ 5514581 (+)
G26333 NA non-coding downstream 313628 5518933 ~ 5519157 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other upstream 259233 4929471 ~ 4944880 (+)
G25958 NA other upstream 575214 4550163 ~ 4628899 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other upstream 968869 4232908 ~ 4235244 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other upstream 973021 4229629 ~ 4231092 (+)
G25551 NA other upstream 1465519 3737502 ~ 3738594 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other downstream 149027 5354332 ~ 5397886 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other downstream 576639 5781944 ~ 5862313 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other downstream 657302 5862607 ~ 5898827 (+)
vhll NA other downstream 1183238 6388543 ~ 6390927 (+)
G26692 NA other downstream 1982635 7187940 ~ 7227437 (+)

Expression


Co-expression Network