G26325


Basic Information

Item Value
gene id G26325
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 5514352 ~ 5514581 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU39045
caaacacactcagaccTCACTCTTGATAGATGAGGTTTTGAGTAGGGCAGAACACAGTGCCCGTGGAGAGTTGCTCTTTGTCAATGGCATCCCGAGTGAGATATGAGTTCACATTAGGCAGCGGAGGTCTCGGGTAGGGGCCTTGCCAGCTTTGCTTGCCCGGGCGCATTCCTCTCCCATTCAGCACTTTGGGAACCGGGAACTCGGGACACAAATATCGGCCATCGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39045 True 230 lncRNA 0.55 1 5514352 5514581

Neighbor

gene id symbol gene type direction distance location
asb13a.2 asb13a.2,LOC107560715,LOC107754063,LOC107655562,LOC103022068,LOC108436004,LOC108280001 coding upstream 96365 5412647 ~ 5417987 (+)
asb13a.1 asb13a.1,LOC107754064,LOC107560716,LOC107655563,LOC107694252,LOC108436003 coding upstream 101788 5410196 ~ 5412564 (+)
gdi2 gdi2,LOC107754057,LOC107560733,LOC107757239,LOC107585127,LOC107694307 coding upstream 104310 5401464 ~ 5410042 (+)
ankrd16 ankrd16,LOC107754065,LOC107594131,LOC107694253,LOC107560709 coding upstream 113439 5398333 ~ 5400913 (+)
mkln1 mkln1,LOC107754054,LOC107655615,LOC107757245,LOC107560731,LOC107587826,LOC107694304 coding downstream 7172 5521753 ~ 5540119 (+)
cry1a cry1aa,LOC107560722,LOC107593424,LOC107655612,LOC107694298,LOC107757210 coding downstream 189900 5704481 ~ 5715620 (+)
tnnt2c tnnt2c,LOC107560724,LOC107655611,LOC107725585 coding downstream 204428 5719009 ~ 5720254 (+)
LOC122342429 si:dkey-47k20.1,LOC107569154,LOC107676314 coding downstream 358078 5872659 ~ 5876129 (+)
LOC122342428 si:dkey-47k20.2,LOC107676311,LOC107569153,LOC107741377,LOC107697634,LOC107741381,LOC107557170,LOC107569155,LOC107569150,LOC107748086 coding downstream 362953 5877534 ~ 5881277 (+)
G26324 NA non-coding upstream 380 5513556 ~ 5513972 (+)
G26318 NA non-coding upstream 4557 5509303 ~ 5509795 (+)
G26314 NA non-coding upstream 8980 5505072 ~ 5505372 (+)
G26196 NA non-coding upstream 309047 5204113 ~ 5205305 (+)
G26156 LOC107715531,LOC107690654,LOC107715130,LOC107574393,LOC564807,LOC564948,LOC107690650 non-coding upstream 391598 5122473 ~ 5122754 (+)
G26333 NA non-coding downstream 4352 5518933 ~ 5519157 (+)
G26334 NA non-coding downstream 4893 5519474 ~ 5519856 (+)
G26340 NA non-coding downstream 38805 5553386 ~ 5553781 (+)
G26337 NA non-coding downstream 48790 5563371 ~ 5571208 (+)
G26342 NA non-coding downstream 58922 5573503 ~ 5573719 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other upstream 116466 5354332 ~ 5397886 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other upstream 569472 4929471 ~ 4944880 (+)
G25958 NA other upstream 885453 4550163 ~ 4628899 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other upstream 1279108 4232908 ~ 4235244 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other upstream 1283260 4229629 ~ 4231092 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other downstream 267363 5781944 ~ 5862313 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other downstream 348026 5862607 ~ 5898827 (+)
vhll NA other downstream 873962 6388543 ~ 6390927 (+)
G26692 NA other downstream 1673359 7187940 ~ 7227437 (+)
akr1b1.1 akr1b1,LOC107725653,LOC107676909,LOC107587163,LOC107591878 other downstream 1899355 7413936 ~ 7463373 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000020_05569133_05573180 NA coding CI01000020 null 5568383 ~ 5573807 (+)