G26398


Basic Information

Item Value
gene id G26398
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 5704489 ~ 5710206 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU39155
AGCCTGGGGAAGACATCAGTGGGTTGGCCGCGGATAACGAAGAGTCGTGAGTTTAGTTTGCGGAGGCTGGCGTCCAAGTCTTCCAAACACTGCAGTAAAAAACCTCCACCTGCTGATCCCAACGTTGGAGGATCCGGCGAACCAGGGGTCGAGGATGTACACACAGCGGACAGTGTGCGCTCCCTGGATAGAGTCTCTGAGTGAAGGATTGTCGTGGAGCCGCAAGCCCTTCCTGAACCAGTGGACCGTATTTACCACCATTACTCCACTTAAGTCCCTTCAACCGTTTGTAGTATGCTGGGGTGCTTCGATACAGACCTCCTCCGCGTTGCCTTACTTACGCTCTTCAAAGAAGAAACTGCTTTCAAAAGCTTAAAAAACGACAAGTTGTCTAATAAAAGTCACTAATGCACGCGCGTTCGATTGATTCTGCTTTATATccggcaaaaaaaaattattagccTTGCTCTAACAAAACACTTTCCATCTTCATGTCTGATGATTTGGAACACGACCACAGTTGAAGCATTGGAGCGCGCGCTGGCTATCCGCGCAACTGCCGAATACACGACCGGCTTTAGGACCAGGACGCGACGCAAAGTGCACTTCCCTGTTGTATAACTTGTTTTTTCCGAATTATCCAAAATAATCAAGaatactgtacatattttagATCTCGCCTGTGTAGCAAGTTGGTCTGCGAGTCGACTTGGCTCTCGGCGCGCGCGGTCCTCCAGATGAAGTCGATTCGGAGACGTGCGAGCCCTAAATCAGAGcgattatgtaaatattaatgttggACCGAGCCCGTCGTGACCGCGTTACTGGCAGCTGTCGCAAAATAAAGCGATGTCCCGCATGAAGTGCGATCTCATATTAGGCATTCGGCGTGTTTCGGTTGTTTCCCCCAACGTTGTGTCCACTTGTAAATATTTTCCCACGGAGAAGGTTCCATAGACTTTCAGCCATGCAATTCAATCGGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39155 True 986 lncRNA 0.49 2 5704489 5710206

Neighbor

gene id symbol gene type direction distance location
LOC122342741 cyb5r3,LOC107590616,LOC107694301,LOC107757248,LOC107655553,LOC103021355,LOC105020308 coding downstream 125909 5575657 ~ 5578580 (-)
podxl podxl coding downstream 154841 5540289 ~ 5549648 (-)
net1 net1,LOC107560732,LOC107586493 coding downstream 228307 5454172 ~ 5476182 (-)
prmt8b prmt8b,LOC107757234,LOC107690649,LOC107694311,LOC108436013 coding downstream 469433 5224238 ~ 5235056 (-)
LOC122342835 LOC107571041,LOC107571048,LOC107658713,LOC107739149,LOC107704613,LOC107658717,LOC107733017,LOC107745022 coding downstream 488327 5207074 ~ 5216162 (-)
si:dkey-222f8.3 si:dkey-222f8.3,LOC107694297,LOC107757251,LOC107725584,LOC107560723,LOC107655610 coding upstream 10210 5720416 ~ 5724961 (-)
braf braf,LOC107725591 coding upstream 210439 5920645 ~ 5937372 (-)
cnot4b cnot4b,LOC107725638,LOC107560719,LOC107655607,LOC107694291,LOC107757256,LOC107602455,LOC108426397 coding upstream 309963 6020169 ~ 6039771 (-)
il17ra1a LOC107655604,LOC107725575,LOC107560717,LOC107694289,LOC107757259,LOC107550053 coding upstream 349045 6059251 ~ 6064160 (-)
rergla rergl,rergla,LOC107560713,LOC107757225,LOC107594299 coding upstream 361698 6071904 ~ 6075632 (-)
G26361 NA non-coding downstream 131057 5570544 ~ 5573432 (-)
G26359 NA non-coding downstream 135117 5555142 ~ 5569372 (-)
G26320 NA non-coding downstream 194230 5509992 ~ 5510259 (-)
G26319 NA non-coding downstream 194722 5509304 ~ 5509767 (-)
G26317 NA non-coding downstream 195388 5508871 ~ 5509101 (-)
LOC122342480 NA non-coding upstream 4933 5715139 ~ 5716435 (-)
trnay-gua_3 NA non-coding upstream 6840 5717046 ~ 5717133 (-)
G26407 NA non-coding upstream 17851 5728057 ~ 5728729 (-)
G26463 NA non-coding upstream 203447 5913653 ~ 5914700 (-)
G26464 NA non-coding upstream 207065 5917271 ~ 5917890 (-)
LOC122343483 LOC107571041,LOC107724548,LOC107658713,LOC107704613,LOC107739149,LOC107589471 other downstream 609849 5085090 ~ 5094640 (-)
LOC122343492 LOC107743325,LOC107580925,LOC107658806,LOC107656283,LOC100330186,LOC107744995 other downstream 946662 4731224 ~ 4757827 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other downstream 1436994 4264926 ~ 4267495 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other downstream 1542661 4133977 ~ 4161828 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other downstream 2086122 3602356 ~ 3618367 (-)
G26405 tnnt2c,LOC107560724,LOC107655611,LOC107725585 other upstream 8806 5719012 ~ 5720250 (-)
G26408 NA other upstream 19812 5730018 ~ 5736946 (-)
G26414 LOC107560737,LOC107690649,LOC107757234,LOC107589816,LOC107694311 other upstream 140198 5850404 ~ 5853366 (-)
G26462 NA other upstream 196549 5906755 ~ 5913538 (-)
mrps33 mrps33,LOC107694294,LOC107597883,LOC107725593,LOC107600452,LOC107655561 other upstream 227849 5938055 ~ 5940015 (-)

Expression


Co-expression Network