G26408


Basic Information

Item Value
gene id G26408
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 5730018 ~ 5736946 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU39169
ggcggttatttgaaacattgccCGTGGACACTTAATCATGCCTGTAGAACAACAGAATTTAGACTGCTGGTGACCAAATTCGAAACGTTTGCACATTCAAATGATCTCtcatccgaaaaaaaaaaaaaataaataaaatgaaatgaaataaaataaaataaaatacaaaaatgaaaaaaataagaacacgCATACGCAACCTCGGTAGATTCAGATTGATTTCTCAGTCTAGAGTTAATTTAGTGCCACTGTCCCGTCACTGTGACGCGGAGGTCGCAGCATCCTCCTGTGGTCTCAAAGAGAACTGCAGTAGAATGTCCCACGGCTCTGCGACAGAGAAGATTCAAACGATTCCACAGCTTGTGcatgatgtgctgctttcagctgtccTGGACGAGGTCATAGCATCCCCTGGAAATCACTTGACGCTTGTCTTCTTCCTttcgcaaaagacaaaacagatccacTTTAATGTACTTCAGTCTGAACACGAAAAAGGAAGGTTggcatcattgaa
>TU39171
ggcggttatttgaaacattgccCGTGGACACTTAATCATGCCTGTAGAACAACAGAATTTAGACTGCTGGTGACCAAATTCGAAACGTTTGCACATTCAAATGATCTCtcatccgaaaaaaaaaaaaaataaataaaatgaaataaaataaaataaaatacaaaaatgaaaaaaataagaacacgCATACGCAACCTCGGTAGATTCAGATTGATTTCTCAGTCTAGAGTTAATTTAGTGCCACTGTCCCGTCACTGTGACGCGGAGGTCGCAGCATCCTCCTGTGGTCTCAAAGAGAACTGCAGTAGAATGTCCCACGGCTCTGCGACAGAGAAGATTCAAACGATTCCACAGCTTGTGcatgatgtgctgctttcagctgtccTGGACGAGGTCATAGCATCCCCTGGAAATCACTTGACGCTTGTCTTCTTCCTttcgcaaaagacaaaacagatccacTTTAATGTACTTCAGTCTGAACACGAAAAAGGAAGGTTggcatcattgaa
>TU39173
ggcggttatttgaaacattgccCGTGGACACTTAATCATGCCTGTAGAACAACAGAATTTAGACTGCTGGTGACCAAATTCGAAACGTTTGCACATTCAAATGATCTCtcatccgaaaaaaaaaaaaaataaataaaatgaaataaaataaaataaaatacaaaaatgaaaaaaataagaacacgCATACGCAACCTCGGTAGATTCAGATTGATTTCTCAGTCTAGAGTTAATTTAGTGCCACTGTCCCGTCACTGTGACGCGGAGGTCGCAGCATCCTCCTGTGGTCTCAAAGAGAACTGCAGTAGAATGTCCCACGGCTCTGCGACAGAGAAGATTCAAACGATTCCACAGCTTGTGcatgatgtgctgctttcagctgtccTGGACGAGGTCATAGCATCCCCTGGAAATCACTTGACGCTTGTCTTCTTCCTttcgcaaaagacaaaacagatccacTTTAATGTACTTCAGTCTGAACACGAAAAAGGAAGGTTggcatcattgaa

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU39169 True 517 TUCP 0.41 2 5730018 5736946
TU39171 False 512 TUCP 0.41 2 5730018 5736946
TU39173 False 512 TUCP 0.41 2 5730018 5736946

Neighbor

gene id symbol gene type direction distance location
si:dkey-222f8.3 si:dkey-222f8.3,LOC107694297,LOC107757251,LOC107725584,LOC107560723,LOC107655610 coding downstream 5057 5720416 ~ 5724961 (-)
btbd11a btbd11a,LOC107757250,LOC107694300,LOC107725623,LOC107655613,LOC107560708,LOC108279962,LOC108426402 coding downstream 18999 5580502 ~ 5711019 (-)
LOC122342741 cyb5r3,LOC107590616,LOC107694301,LOC107757248,LOC107655553,LOC103021355,LOC105020308 coding downstream 151438 5575657 ~ 5578580 (-)
podxl podxl coding downstream 180370 5540289 ~ 5549648 (-)
net1 net1,LOC107560732,LOC107586493 coding downstream 253836 5454172 ~ 5476182 (-)
braf braf,LOC107725591 coding upstream 183699 5920645 ~ 5937372 (-)
cnot4b cnot4b,LOC107725638,LOC107560719,LOC107655607,LOC107694291,LOC107757256,LOC107602455,LOC108426397 coding upstream 283223 6020169 ~ 6039771 (-)
il17ra1a LOC107655604,LOC107725575,LOC107560717,LOC107694289,LOC107757259,LOC107550053 coding upstream 322305 6059251 ~ 6064160 (-)
rergla rergl,rergla,LOC107560713,LOC107757225,LOC107594299 coding upstream 334958 6071904 ~ 6075632 (-)
mgst1.1 mgst1.1,mgst1,LOC107725525,LOC107578494,LOC107655601,LOC107555141,LOC107694287,LOC107757263 coding upstream 515823 6252769 ~ 6255043 (-)
G26407 NA non-coding downstream 1289 5728057 ~ 5728729 (-)
trnay-gua_3 NA non-coding downstream 12885 5717046 ~ 5717133 (-)
LOC122342480 NA non-coding downstream 13583 5715139 ~ 5716435 (-)
G26398 NA non-coding downstream 19812 5704489 ~ 5710206 (-)
G26361 NA non-coding downstream 156586 5570544 ~ 5573432 (-)
G26463 NA non-coding upstream 176707 5913653 ~ 5914700 (-)
G26464 NA non-coding upstream 180325 5917271 ~ 5917890 (-)
G26469 tmem178b,LOC107725619,LOC107694293,LOC107655551,LOC107590312 non-coding upstream 206693 5943639 ~ 6017691 (-)
G26487 NA non-coding upstream 340141 6077087 ~ 6077332 (-)
G26490 NA non-coding upstream 346644 6083590 ~ 6084210 (-)
G26405 tnnt2c,LOC107560724,LOC107655611,LOC107725585 other downstream 9768 5719012 ~ 5720250 (-)
LOC122343483 LOC107571041,LOC107724548,LOC107658713,LOC107704613,LOC107739149,LOC107589471 other downstream 635378 5085090 ~ 5094640 (-)
LOC122343492 LOC107743325,LOC107580925,LOC107658806,LOC107656283,LOC100330186,LOC107744995 other downstream 972191 4731224 ~ 4757827 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other downstream 1462523 4264926 ~ 4267495 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other downstream 1568190 4133977 ~ 4161828 (-)
G26414 LOC107560737,LOC107690649,LOC107757234,LOC107589816,LOC107694311 other upstream 113458 5850404 ~ 5853366 (-)
G26462 NA other upstream 169809 5906755 ~ 5913538 (-)
mrps33 mrps33,LOC107694294,LOC107597883,LOC107725593,LOC107600452,LOC107655561 other upstream 201109 5938055 ~ 5940015 (-)
arhgef39 arhgef39,LOC107725686,LOC107655603,LOC107757260,LOC107694288 other upstream 348946 6085892 ~ 6252648 (-)
msrb3 msrb3,LOC107725596,LOC107587134,LOC107757268,LOC107561995 other upstream 613545 6350491 ~ 6361484 (-)

Expression


Co-expression Network