G26692


Basic Information

Item Value
gene id G26692
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 7187940 ~ 7227437 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU39561
TGCAATTTTAATGCAGACATAATCACCACACAATTGATCATTATTACTCATATCTGTAAGGCACTACCTGGTAAAGAAAGGCAAACAAGAAGCTTTACAATAAGCCATTTACACGGTCATAGCTAGACACCACAGAAGAACTGGCAGGAAGAGCGGGAAAAAGCAGAGAAGAATATGAAATCTTGGCAGTTGGGCTATATTTACAGTTCAAAGGCATTTCCTGCTGTGTCCATCATGCTCAGGATGGGGGCGGTGCcagcctctgattggctgcagtGCAACGTCGTCACCGCCTACCGAGGCAACACAAGTCACAAGTTCGTAAAGAAACGGTATAATCCTCATTACCCTTTTGTCATCAAGCGTGTGAAGTGTTTGGCACGTTCGAGTCAGAACATACAGGTAGGAAAAGCGTACCATTTACAAAAACTTACCATCAGCTGCCATACCGTTatatcttttttattcattaatttacaCTTTAAACTAGATCATCTgatacacacaaaacaacacaagcTTAAGATGGTTGCGAACAGCTGCGAACGATTTATTTAAACTTTGGTaagctctaaaaaaaaaaaaaagaaaagaattttAGTACCAATAAACTAAATGGAAACTCTATGATTTAATTGGCATACGAGTAGCTCTCAGTCCATACTATTGCTGTTAAGGCAAAGTCACGATCGTCCGTATTTCATCGTCACATTCAAGGAGATCCTCTACCATACGTGCGTGTTAAATATATCTCAAGAAAGGCAACCAGCAAAGCAAATCAAATATCGtcgatttaaaaatacaaaatcataaCTGTCATAAAATAAGGCAAGCCATGTGTCGAAGTGCACGTATATAAAAGCAAAGatggtacaaaaacaaaaacaaaaacaaaaacaaaaaaaaaaacgcaactGCTGGATCAGACACCAAAGCAAAGGGAGATAAAAGCTTCCGTGGCCTTTGTtctgagtgtctgtgtgtcatGGATCAAATGCGCTTTCGCCGTGTTTCTGAGACGCGGACGGCCGCTCGACGACTGCGGCCCGTTCTTTTGAGCTCTGGCTAAATTAGAATCTGACTTGATGACGTTTCTGTACGCAATTACCgataaaacacacttaaaaatacttGGGGAGGGACAAAAGGAGCACCGGCTCGGACGTCAGCATCACAAACACCTACACAAACCGATAGCGGTACCAAAAACTGAACCGCGAGCCGATGGCGCGTCAAAGAACccacaggatgtgacatcatcACCGCACAGGAATGAGGGCGGCACTTAAAACACGCAGGAAAACAAAATAGTAGGCTAAAGAATAATCCATCTGCTCTGtctaaagtgtaaaaatatatttacatataacaCTATTTTAATTCATCTACACAGGAAGAATATACCGAACATCTGATTATTGGCATAGCAGAacgcaaaaataaatgctgggCTTTCATTGTGCAGGTGCTGATCTGAAGTACCACGGTGAGATTTCGTTCTGCTCCACTGCTATGTTCCCCTCAGGTCAGAGCGTATTCTGTTGGTCCCTCTGAATCAAAAGCTGAGAGAGTCGCGTGGAGAGGAAGGGTCCGCAATTAGTCTGTGTTCCTCCTCGCTTTATCTTTCACTCCACGGAGCGGAGGCTCCATCAACCAGAGTCCTCCACAAGGGCTGTTCCTATTTTTCGAGCCCATTAAATTGAGCTCTGTCTTGGTTTTAGTGGCACTTCCGTCTGCTTTCTTGAGTCTGGGCTCCTTGACACTAAAGATCGGTCACTTTATTCTCCAGCGCAGCGGCGATCTGCTGCAGTCTGAGGGTCAGCTGTTTGCTCTGGGCGGCAGGGTCATCCTCCAGCGACGAGATGA
>TU39562
attttatttatttatttttttttattgcattagtaaaattatacatttagaaactttttgttgcttttacttttaaactaaggattacatatttattcataaacttTATCAATATGCATGGTGTGATAACTttcaggaaaataataataaaataaaaaataaaatatatataactttttttttttaaaaaagaaaagaattttAGTACCAATAAACTAAATGGAAACTCTATGATTTAATTGGCATACGAGTAGCTCTCAGTCCATACTATTGCTGTTAAGGCAAAGTCACGATCGTCCGTATTTCATCGTCACATTCAAGGAGATCCTCTACCATACGTGCGTGTTAAATATATCTCAAGAAAGGCAACCAGCAAAGCAAATCAAATATCGtcgatttaaaaatacaaaatcataaCTGTCATAAAATAAGGCAAGCCATGTGTCGAAGTGCACGTATATAAAAGCAAAGatggtacaaaaacaaaaacaaaaacaaaaacaaaaaaaaaaacgcaactGCTGGATCAGACACCAAAGCAAAGGGAGATAAAAGCTTCCGTGGCCTTTGTtctgagtgtctgtgtgtcatGGATCAAATGCGCTTTCGCCGTGTTTCTGAGACGCGGACGGCCGCTCGACGACTGCGGCCCGTTCTTTTGAGCTCTGGCTAAATTAGAATCTGACTTGATGACGTTTCTGTACGCAATTACCgataaaacacacttaaaaatacttGGGGAGGGACAAAAGGAGCACCGGCTCGGACGTCAGCATCACAAACACCTACACAAACCGATAGCGGTACCAAAAACTGAACCGCGAGCCGATGGCGCGTCAAAGAACccacaggatgtgacatcatcACCGCACAGGAATGAGGGCGGCACTTAAAACACGCAGGAAAACAAAATAGTAGGCTAAAGAATAATCCATCTGCTCTGtctaaagtgtaaaaatatatttacatataacaCTATTTTAATTCATCTACACAGGAAGAATATACCGAACATCTGATTATTGGCATAGCAGAacgcaaaaataaatgctgggCTTTCATTGTGCAGGTGCTGATCTGAAGTACCACGGTGAGATTTCGTTCTGCTCCACTGCTATGTTCCCCTCAGGTCAGAGCGTATTCTGTTGGTCCCTCTGAATCAAAAGCTGAGAGAGTCGCGTGGAGAGGAAGGGTCCGCAATTAGTCTGTGTTCCTCCTCGCTTTATCTTTCACTCCACGGAGCGGAGGCTCCATCAACCAGAGTCCTCCACAAGGGCTGTTCCTATTTTTCGAGCCCATTAAATTGAGCTCTGTCTTGGTTTTAGTGGCACTTCCGTCTGCTTTCTTGAGTCTGGGCTCCTTGACACTAAAGATCGGTCACTTTATTCTCCAGCGCAGCGGCGATCTGCTGCAGTCTGAGGGTCAGCTGTTTGCTCTGGGCGGCAGGGTCATCCTCCAGCGACGAGATGA

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU39561 True 1866 TUCP 0.43 2 7225521 7227437
TU39562 False 1470 lncRNA 0.41 2 7187940 7227437

Neighbor

gene id symbol gene type direction distance location
nuak1a nuak1a,nuak1,LOC107587153,LOC107729860,LOC107690659,LOC107582835,LOC108439414 coding upstream 2580 7172472 ~ 7185360 (+)
prl2 prl2,LOC107655571,LOC107587154,LOC107725674,LOC107582933,LOC107729861 coding upstream 18809 7165557 ~ 7169131 (+)
pphln1 LOC107725587,LOC107655578,LOC107587147,LOC107582222,LOC107729837 coding upstream 217522 6954797 ~ 6970418 (+)
pdzrn4 pdzrn4,LOC107587183,LOC107725536,LOC107581937,LOC107694264,LOC107729830 coding upstream 269693 6890949 ~ 6918247 (+)
cntn1b cntn1,cntn1b,LOC107757284,LOC107581848,LOC107694230 coding upstream 322992 6853769 ~ 6864948 (+)
abcc9 abcc9,LOC107725580,LOC107655566,LOC107690381,LOC107583096,LOC107587156,LOC107729856 coding downstream 104434 7331871 ~ 7364458 (+)
kcnj8 kcnj8,LOC107725582,LOC107655555,LOC107729834,LOC107690420,LOC107587158,LOC107595650 coding downstream 138117 7365554 ~ 7368988 (+)
LOC122343893 NA coding downstream 142698 7370135 ~ 7370275 (+)
cmasa LOC107725656,LOC107676932,LOC107587160,LOC107690429,LOC107583561 coding downstream 143586 7371023 ~ 7375055 (+)
LOC122343892 NA coding downstream 146417 7373854 ~ 7373994 (+)
G26669 pus7l,LOC107591455 non-coding upstream 99581 7083300 ~ 7088359 (+)
LOC122343425 NA non-coding upstream 126898 7057424 ~ 7061042 (+)
LOC122342579 NA non-coding upstream 174279 6985243 ~ 7013661 (+)
G26585 grip1,LOC107587171,LOC107655593 non-coding upstream 783541 6399167 ~ 6404399 (+)
G26517 LOC107655597,LOC107725654,LOC107757228,LOC107560265,LOC107587133 non-coding upstream 889860 6216841 ~ 6298080 (+)
LOC122342925 NA non-coding downstream 363124 7590561 ~ 7636680 (+)
LOC122342735 NA non-coding downstream 888451 8115888 ~ 8123874 (+)
G26994 NA non-coding downstream 897822 8125259 ~ 8125994 (+)
LOC122342736 NA non-coding downstream 901724 8129161 ~ 8132328 (+)
G27066 NA non-coding downstream 948028 8175465 ~ 8175799 (+)
vhll NA other upstream 797013 6388543 ~ 6390927 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other upstream 1289113 5862607 ~ 5898827 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other upstream 1325627 5781944 ~ 5862313 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other upstream 1790054 5354332 ~ 5397886 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other upstream 2243060 4929471 ~ 4944880 (+)
akr1b1.1 akr1b1,LOC107725653,LOC107676909,LOC107587163,LOC107591878 other downstream 186499 7413936 ~ 7463373 (+)
ube2h ube2h,LOC107676921,LOC107690610,LOC105888480 other downstream 305475 7532912 ~ 7558489 (+)
col7a1l col7a1l,LOC107725642,LOC107744879,LOC107676908,LOC107555540,LOC107592433,LOC108435442 other downstream 813995 8041432 ~ 8100749 (+)
G26993 NA other downstream 910301 8137738 ~ 8138439 (+)
G27079 NA other downstream 1020475 8247912 ~ 8249223 (+)

Expression


Co-expression Network