G27084


Basic Information

Item Value
gene id G27084
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 8278559 ~ 8331302 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40122
ATGTAAGAAATATGgtttattcaaataaagatGAACAAACTGCTttggcatttgtttttttttaacaaaataaaacaacaaatcagGGAACTTACAACTTCTACAACAGTCTGCCAAAGTTACTGTAATCTCACGGCTCAATAATTTGACTAACATGGTGATGATGTGAAATGGTGTattgaatacataaaaaaaattcaatgtgGTTTACCATAGAATTGAAAGCAATCTCTGTTACAAAATAAGATGAACTGCATGCAGATAAAATATGGTATAAATGTTGGCAGAGTTAAGAAATTCAAGCTGATACTAATTTGCTATTAATACAACATTTTGCCACTGAAATTCCtcagttaaataataataaaaaaacctttagaTTTATTTAGCAGTTAGCTAAACCTCATCAAATTCATTCAGTGTccagcattttttctttttttcagttttgcgtGCATTTCAATTTCAGATGAATTCTTGATATCCTTCAACATCACTgcacatttagtcattttatataCAACTAAGATAGTTATGTTCCATAATGTGTACTCTAAACAATCTAATGTCCTTACCGGCAGGTTTATTAATAACATGATTACAATTGTGACTGATAAGGTATTTAACATGCGCTTAGATGACATATAGTGCTGCTTCGTATAGAGTGCACACTGGGCTATTCACAATTTGCACAAATATGTCTCTCATTTAAATGGGAATATTTCATCTAATTCATCTAATACTCTTTATACAGTACCATACAAGACTGAAATTTTATGTGCCAGATTTGAAGACCCCAGACTACTGCTgccctttatatatatatatagatgtgttcataaacattttatagaGGAAGTGTTGCATGTAACCAGATATGGTTGCCGGGATCATGAATAAAGACATGCATATGTCAATCAGAGTGTCTAATAAGAGCAATAGCCTTAATTTGTTTGATAAACTACTAGCGAGATGCGACTCTATTCAAAGATGATCTCTGAGGCTTGGCGTAGGCAGTTAGCCGTGTCATCTGGCATACTGCTGTGTGTGAGGTTGTTTCCATCCAAGCGCAGGGTCCTCAGTCGAGAGTAGTTGACCGGGGAGCTGAACTTGCAGATATTCGTCA
>TU40125
ATGTAAGAAATATGgtttattcaaataaagatGAACAAACTGCTttggcatttgtttttttttaacaaaataaaacaacaaatcagGGAACTTACAACTTCTACAACAGTCTGCCAAAGTTACTGTAATCTCACGGCTCAATAATTTGACTAACATGGTGATGATGTGAAATGGTGTattgaatacataaaaaaaattcaatgtgGTTTACCATAGAATTGAAAGCAATCTCTGTTACAAAATAAGATGAACTGCATGCAGATAAAATATGGTATAAATGTTGGCAGAGTTAAGAAATTCAAGCTGATACTAATTTGCTATTAATACAACATTTTGCCACTGAAATTCCtcagttaaataataataaaaaaacctttagaTTTATTTAGCAGTTAGCTAAACCTCATCAAATTCATTCAGTGTccagcattttttctttttttcagttttgcgtGCATTTCAATTTCAGATGAATTCTTGATATCCTTCAACATCACTgcacatttagtcattttatataCAACTAAGATAGTTATGTTCCATAATGTGTACTCTAAACAATCTAATGTCCTTACCGGCAGGTTTATTAATAACATGATTACAATTGTGACTGATAAGGTATTTAACATGCGCTTAGATGACATATAGTGCTGCTTCGTATAGAGTGCACACTGGGCTATTCACAATTTGCACAAATATGTCTCTCATTTAAATGGGAATATTTCATCTAATTCATCTAATACTCTTTATACAGTACCATACAAGACTGAAATTTTATGTGCCAGATTTGAAGACCCCAGACTACTGCTgccctttatatatatatatatatatatatatatacacatatatatatatatatatatatatatatatatatacacacatatatatatatacacacacacacatatatatatatatatatatatatatatatatacatata
>TU40126
ATGTAAGAAATATGgtttattcaaataaagatGAACAAACTGCTttggcatttgtttttttttaacaaaataaaacaacaaatcagGGAACTTACAACTTCTACAACAGTCTGCCAAAGTTACTGTAATCTCACGGCTCAATAATTTGACTAACATGGTGATGATGTGAAATGGTGTattgaatacataaaaaaaattcaatgtgGTTTACCATAGAATTGAAAGCAATCTCTGTTACAAAATAAGATGAACTGCATGCAGATAAAATATGGTATAAATGTTGGCAGAGTTAAGAAATTCAAGCTGATACTAATTTGCTATTAATACAACATTTTGCCACTGAAATTCCtcagttaaataataataaaaaaacctttagaTTTATTTAGCAGTTAGCTAAACCTCATCAAATTCATTCAGTGTccagcattttttctttttttcagttttgcgtGCATTTCAATTTCAGATGAATTCTTGATATCCTTCAACATCACTgcacatttagtcattttatataCAACTAAGATAGTTATGTTCCATAATGTGTACTCTAAACAATCTAATGTCCTTACCGGCAGGTTTATTAATAACATGATTACAATTGTGACTGATAAGGTATTTAACATGCGCTTAGATGACATATAGTGCTGCTTCGTATAGAGTGCACACTGGGCTATTCACAATTTGCACAAATATGTCTCTCATTTAAATGGGAATATTTCATCTAATTCATCTAATACTCTTTATACAGTACCATACAAGACTGAAATTTTATGTGCCAGATTTGAAGACCCCAGACTACTGCTgccctttatatatatatatatatatatatacacacatatatatatatatatatatatatatatatatatacacacatatatatatatacacacacacacatatatatatatatatatatatatatatatatacatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40122 True 1126 lncRNA 0.34 2 8278559 8279736
TU40125 False 949 lncRNA 0.28 2 8278559 8331302
TU40126 False 947 lncRNA 0.28 2 8278559 8331302

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-38g8.5 si:dkeyp-38g8.5,LOC107595941,LOC107659854,LOC107744947,LOC107690729,LOC107725679 coding upstream 23714 8252084 ~ 8254845 (+)
copg2 copg2,LOC107725548,LOC107676915,LOC107744880 coding upstream 165650 8103345 ~ 8112909 (+)
ucn3l ucn3l,LOC107725544,LOC107676913,LOC107595855,LOC107555541,LOC107744883,LOC107690866 coding upstream 175755 8101251 ~ 8102804 (+)
lrguk lrguk,LOC107690848,LOC107744931,LOC107725511,LOC107676907,LOC107555539 coding upstream 243630 8019911 ~ 8034929 (+)
exoc4 exoc4,LOC107555552,LOC107585070,LOC107676929,LOC107690838 coding upstream 259057 7917750 ~ 8019502 (+)
pkp2 LOC107725677,LOC107659846,LOC107586091,LOC107694692,LOC107589947 coding downstream 129146 8460448 ~ 8474705 (+)
tcp11l2 tcp11l2,LOC107586172,LOC107589958,LOC107694691,LOC107659845,LOC107744901,LOC107725683 coding downstream 144404 8475706 ~ 8482653 (+)
golt1ba golt1ba,golt1b,LOC107725527,LOC107591215,LOC107586262,LOC107659829,LOC108437943 coding downstream 152671 8483973 ~ 8487631 (+)
kiss2 NA coding downstream 171564 8502866 ~ 8504047 (+)
dnai7 casc1,LOC107725557,LOC107659833,LOC107744936 coding downstream 442986 8774288 ~ 8780078 (+)
G27066 NA non-coding upstream 102760 8175465 ~ 8175799 (+)
LOC122342736 NA non-coding upstream 146231 8129161 ~ 8132328 (+)
G26994 NA non-coding upstream 152565 8125259 ~ 8125994 (+)
LOC122342735 NA non-coding upstream 154685 8115888 ~ 8123874 (+)
LOC122342925 NA non-coding upstream 641879 7590561 ~ 7636680 (+)
LOC122343529 NA non-coding downstream 43352 8374654 ~ 8377309 (+)
G27121 NA non-coding downstream 140373 8471675 ~ 8505096 (+)
G27162 NA non-coding downstream 421136 8752438 ~ 8752849 (+)
G27301 NA non-coding downstream 621620 8952922 ~ 8953122 (+)
G27345 NA non-coding downstream 722719 9054021 ~ 9057297 (+)
G27079 NA other upstream 29336 8247912 ~ 8249223 (+)
G26993 NA other upstream 140120 8137738 ~ 8138439 (+)
col7a1l col7a1l,LOC107725642,LOC107744879,LOC107676908,LOC107555540,LOC107592433,LOC108435442 other upstream 177810 8041432 ~ 8100749 (+)
ube2h ube2h,LOC107676921,LOC107690610,LOC105888480 other upstream 720070 7532912 ~ 7558489 (+)
akr1b1.1 akr1b1,LOC107725653,LOC107676909,LOC107587163,LOC107591878 other upstream 815186 7413936 ~ 7463373 (+)
stmp1 NA other downstream 151588 8482890 ~ 8483831 (+)
spx spx,LOC107589995,LOC107744902,LOC107694690,LOC107596170,LOC107725633 other downstream 156609 8487911 ~ 8491938 (+)
etnk1 etnk1,LOC107725541,LOC107659837,LOC107694683,LOC107590048,LOC107744908 other downstream 202514 8533816 ~ 8548002 (+)
ascl1a ascl1a,ascl1,LOC107590149,LOC107664850,LOC107596391,LOC107744950,LOC106576285 other downstream 543415 8874717 ~ 8890176 (+)
washc3 ccdc53,LOC107695862,LOC107590199,LOC107596601,LOC107744922,LOC107664856 other downstream 684539 9015841 ~ 9018333 (+)

Expression


Co-expression Network