G27121


Basic Information

Item Value
gene id G27121
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 8471675 ~ 8505096 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40165
ttttttttttttttttttttttttttttttttttAGATTTGAACAggtttaaatttattaatttgatcttTTACACTCACATGATCAACACTTACAACATGATTCAGAAGAATGAATACActtgtatctctctctcttcaatCCCTTCTCCTCTTGACTTAAACAGAAAGACCCAAGAACGTTCCCTAATGAACTCACCCAATTATGTCTAGACAAGAGAGGTGTTGGTTCTTTCTTTATTGCCCACACAGAGCGACTAGGTTAACAAGTGCAAATGTGAAGAACCAGAGATGTTTCCCTTTGATCATTCtctttagaagaagaaaaattcCACATTTTGGATTATTACTGTGCCTACATTAACCACcacgaaaaaaagaaaaagaaaagagaaatacTTCAAAGCAACCGTGTCCAAAAGCAAGTGAGAAGAAAGGACAGACACCGAGTTAGAGAGTGTGTAAAGATACCCGGGGAGTGTGAGCGGAGTCAAGGGAAGGAGTGCACGGTGTCCCGCGGCTGGTCTACAGGTCCTTAAGGTCTTTCTGGATACCCCACAGAGTGTCTGCGCTCTTCTTCAGCTGAGAGATTTCTTCGTCGTTCAGGGTCATGTTGATGACGCTGCCCACTCCGCTGCTGTTCAGCACACAGGGCAGGCTGAGGTACACCTCCTCGCCGATACCGTACATGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40165 True 693 lncRNA 0.42 2 8471675 8505096

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-38g8.5 si:dkeyp-38g8.5,LOC107595941,LOC107659854,LOC107744947,LOC107690729,LOC107725679 coding upstream 216830 8252084 ~ 8254845 (+)
copg2 copg2,LOC107725548,LOC107676915,LOC107744880 coding upstream 358766 8103345 ~ 8112909 (+)
ucn3l ucn3l,LOC107725544,LOC107676913,LOC107595855,LOC107555541,LOC107744883,LOC107690866 coding upstream 368871 8101251 ~ 8102804 (+)
lrguk lrguk,LOC107690848,LOC107744931,LOC107725511,LOC107676907,LOC107555539 coding upstream 436746 8019911 ~ 8034929 (+)
exoc4 exoc4,LOC107555552,LOC107585070,LOC107676929,LOC107690838 coding upstream 452173 7917750 ~ 8019502 (+)
dnai7 casc1,LOC107725557,LOC107659833,LOC107744936 coding downstream 269192 8774288 ~ 8780078 (+)
bcat1 bcat1,LOC107590116,LOC107725514,LOC107664876,LOC107744911,LOC107587341 coding downstream 299096 8804192 ~ 8815015 (+)
igf1 igf1,LOC107659835,LOC107725558,LOC107664880 coding downstream 316634 8821730 ~ 8832632 (+)
pmch pmch,LOC107659836,LOC107591230 coding downstream 336648 8841744 ~ 8843250 (+)
nup37 nup37,LOC107590136,LOC107695872,LOC107664874,LOC107744917 coding downstream 350308 8855404 ~ 8865918 (+)
LOC122343529 NA non-coding upstream 94366 8374654 ~ 8377309 (+)
G27084 NA non-coding upstream 140373 8278559 ~ 8331302 (+)
G27073 NA non-coding upstream 172676 8225458 ~ 8298999 (+)
G27066 NA non-coding upstream 295876 8175465 ~ 8175799 (+)
LOC122342736 NA non-coding upstream 339347 8129161 ~ 8132328 (+)
G27162 NA non-coding downstream 247342 8752438 ~ 8752849 (+)
G27301 NA non-coding downstream 447826 8952922 ~ 8953122 (+)
G27345 NA non-coding downstream 548925 9054021 ~ 9057297 (+)
G27347 LOC107590965,LOC107695883 non-coding downstream 552772 9057868 ~ 9058292 (+)
G27352 NA non-coding downstream 563835 9068931 ~ 9076136 (+)
G27079 NA other upstream 222452 8247912 ~ 8249223 (+)
G26993 NA other upstream 333236 8137738 ~ 8138439 (+)
col7a1l col7a1l,LOC107725642,LOC107744879,LOC107676908,LOC107555540,LOC107592433,LOC108435442 other upstream 370926 8041432 ~ 8100749 (+)
ube2h ube2h,LOC107676921,LOC107690610,LOC105888480 other upstream 913186 7532912 ~ 7558489 (+)
akr1b1.1 akr1b1,LOC107725653,LOC107676909,LOC107587163,LOC107591878 other upstream 1008302 7413936 ~ 7463373 (+)
etnk1 etnk1,LOC107725541,LOC107659837,LOC107694683,LOC107590048,LOC107744908 other downstream 28720 8533816 ~ 8548002 (+)
ascl1a ascl1a,ascl1,LOC107590149,LOC107664850,LOC107596391,LOC107744950,LOC106576285 other downstream 369621 8874717 ~ 8890176 (+)
washc3 ccdc53,LOC107695862,LOC107590199,LOC107596601,LOC107744922,LOC107664856 other downstream 510745 9015841 ~ 9018333 (+)
apaf1 apaf1,LOC107744928 other downstream 533542 9038638 ~ 9221046 (+)
G27360 anks1b other downstream 658051 9163147 ~ 9227212 (+)

Expression


Co-expression Network