spx (spx,LOC107589995,LOC107744902,LOC107694690,LOC107596170,LOC107725633)


Basic Information

Item Value
gene id spx
gene name spx,LOC107589995,LOC107744902,LOC107694690,LOC107596170,LOC107725633
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 8487911 ~ 8491938 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40170
taaacagtTATGTATTGcctattatgtaagcaaaagcCTATTTTTGATGAGATTAATTTTTGATAATTGTTTGATagcacaaattatatatatataggattccatttttatttttctggttCTTTTTGATCACACTACTTGTCATATTAGTACATTTCTTTTCTCGTGACCTAAAATGACAAATGGTTAATTATACTGAAGAACGAGAAACACTATTTTTCTTCGGTCTAGCTTTACTACAAGATTTGTTGCTTCGTAATCCGTTTCAGAGATGCACGTTTAAGCTGTATGCTTCTCCCATTATTGTTCCCTTCTGGAAGAGACATAAATTGCAAGTAATTTGTAGGCAGAGCCCAGCAGATATTTCTATATGTAGTGTCAGCAGGGAAACCCCATCAGCCGCTCACTGTTCATTCATACAAAACGATTAGCTGGTGTATTTGAGACGCTTCGTTGCTGAAGGTGTAAACATATCAATACTTTCCAGCCTCTTCTTTTCATTAGTTAGCTATTAAAAGTGCACACGGATGGAAATTTCCCTTCAGCGGCTCTTAAAAGCATCCTAGCTTTCAGATGCAAGCGTAGCCAGCCAGTGTAGTCTCCGAACGTCATAGCAGTAAAGCAgccttattatttttaaagggaGGGTTAACTAATCGCTCGGAAAGGTTCGTGGTCCGGCCCCGTTGTGAATCAATGGGACTTGACCTATAGCTGAAGACTAATTCATTCAACATTCCCCCACCCTGATGATTATAAATATCAAGGACAGTCTTCACAGTCTTCACTTTTGATCTTACCTCTGAGACCCAACAGCCGAAGAGAACGAAGAGACACTATGAAAGTAAGTCCACATTCATGCTGAAATTTGTCTCGTACGTGTTTagcgattcatttttaaacagacCGAATaagctgattttattttaacatcagGAATCTTGTATTGATACATGCGTGTATATTTAACAATGAAGTGAAGAGAGACTTCTATACAGCGCTATACAAGGCTcttgatatattatatattctaacACGACTTCACCCTTTCAGGATTTAAGGACTCTTGCGGCTTACGCACTCGCGCTTTTACTTCTGGCAACATTTGTGTCCCATTCATGGAGTGCACCCAAGggCAGTTTCCAGCGTCGGAACTGGACACCCCAAGCCATGTTATATTTGAAGGGCACACAGGGACGGCGCTTTGTGTCTGAAGACAGAAACGAAGGGGACTTGTATGACACTATACGCTTAgAGTCACGCAGccaaaacacagaaaacctGAGCATCTCTAAAGCGGCTGCATTTCTCTTAAATGTTCTCCAGCAAGCCAGAGACGAGGGTGAGCCTTACTGAAACCGGCTCGGAGAGCACCAACAACCCACTCTTTTCATCTGAATACTTCCAGTTTTGTGAGCCATGTGGAATTTCATGTTTTCAAGTTCATCCTCCGCTGCAGCGATGCCCCGTGTTTGACATCTCTGAAGGTTTATCACTCACTGTTCCACACTATTACCGCTAGATCTGAGTAATGTAGAGATCGGTGTGTCTCCAGATTGTTTATATGATTCCACTCGGACCGATTATTGAAATAACAAAGGCTGACAGTaaggtattttttaatttctttatttctttcaggcgaaagtattaataaaagtgaataatgGTTGTTTTTTCAAGACATATCTTGGAAAAGAGTATTTATGATGATTAAAATTATGTGTAATATAAAGTTAACTGTACAGATTTTTGTCCTATTCATTTTCTCATGTTAAATCGACATGTGAATTGACTGGTctgtaaaatacatatttgcgAATGTGTGAACATTTTCTCaattaattaaactgaatttgCACTGATAAGCACTACTGTGAGTGTGACTCTTTATAAAAACACGGGTGGAATTTTTTTGTGGTTGAACTTTGCTTTGCCAAAGTATTCGTAGCCTTTCATTCTTACACGTTATGTTATACAGCCTtttgttaaactgctttaaattaagcAGAGCCCTTCTCCATCGGTTGCTCTGTTCAGCCAGCTCTACGAAAAGTCCTCCTAGTTGATCTAAACTTCTTCCATTATCTTTCTAAATCATACCTATTCAATTAAATGGGACACAGGGTAACTTCACCTGAAGTGTAGTAACATATGCAACATAGCAATATGAATGCCTCTGAGCTAAAATCTTCTCCCAAgataagggtatgaatacttatgcaatgggacctttaagttttatttttaatgaatttgcaaagatgttttgtttttgttttttttgctttgccatTACGTTGTATAGAGTGTAGAATGAAgtggaaaaaagtaatttaaagcagtttaacataagacatcaaaataaaccatgaggggggaaaaaaaaaaaaaaaaaaaaaaaaaggtagggGTATGAAAACTTTTGCAAAGCACTGTATGTAAAGGTgtctttttcacattaaaattattatagcTAAATTTGGTTTAAAACACAAGATGTGTGTTTGGTAGCAAATTTCTATcaaaaagagactttttttaataaacatttcatgcatttcatgGAAAGTTGTCAGTATCATAATATGATTTAAGTTCAACTGGAAAactaatgttacatttttatttgtcccgcttttgttttaatgacagCAGCATTTGAATTGCACGAACTCTGCAAGTTCATGTCAAACCTGATGGTCATGTTTTTAAGCATGATTTCATCTCCGACGGAAGAAACAATCATAAGTACAAATGAGTTCGAAATGAGAACCATTCACATGGTTCGGTTTTCATCAGTTACAAGTTTAAAAGGGTTATTTAATCCCAGATTCTCGGTGTGATCGAATACCACTACGTTAAAGATATCTTCCCATTATAATAATCCATTCAAAAGCTGTATTCAGACAAATGTAGCACATTCTCAGAGGGCAGGGGTGTAAATATGTCCTAGAGTCTGAACTACTGGAGCAGGAGGGTGCAGATCTTAATTTCCATTTTCCAGCGGTTGTTTGCTCTTACCCTCAGGCTCTGCACCCAGAGTAAACGGTGCCTTGATGTTCTGCCTGTCCCTCTCCGCTTCCTCCTCTTCGTCATAGGTGTCGTCATCTTCCTCATCGCTGTGGTGAGGGGTGGAGTGGAGGGAAGCCGACGGGGATGGAGGGACGGAAGCAGGTCGGGGGTAACGGAA
>XM_043237150.1
atttattaagtatatatgaATAcgaacacatgcatgcatttttttaaaaatactgtatgtgtatttatatatacataaacagtTATGTATTGcctattatgtaagcaaaagcCTATTTTTGATGAGATTAATTTTTGATAATTGTTTGATagcacaaattatatatatataggattccatttttatttttctggttCTTTTTGATCACACTACTTGTCATATTAGTACATTTCTTTTCTCGTGACCTAAAATGACAAATGGTTAATTATACTGAAGAACGAGAAACACTATTTTTCTTCGGTCTAGCTTTACTACAAGATTTGTTGCTTCGTAATCCGTTTCAGAGATGCACGTTTAAGCTGTATGCTTCTCCCATTATTGTTCCCTTCTGGAAGAGACATAAATTGCAAGTAATTTGTAGGCAGAGCCCAGCAGATATTTCTATATGTAGTGTCAGCAGGGAAACCCCATCAGCCGCTCACTGTTCATTCATACAAAACGATTAGCTGGTGTATTTGAGACGCTTCGTTGCTGAAGGTGTAAACATATCAATACTTTCCAGCCTCTTCTTTTCATTAGTTAGCTATTAAAAGTGCACACGGATGGAAATTTCCCTTCAGCGGCTCTTAAAAGCATCCTAGCTTTCAGATGCAAGCGTAGCCAGCCAGTGTAGTCTCCGAACGTCATAGCAGTAAAGCAgccttattatttttaaagggaGGGTTAACTAATCGCTCGGAAAGGTTCGTGGTCCGGCCCCGTTGTGAATCAATGGGACTTGACCTATAGCTGAAGACTAATTCATTCAACATTCCCCCACCCTGATGATTATAAATATCAAGGACAGTCTTCACAGTCTTCACTTTTGATCTTACCTCTGAGACCCAACAGCCGAAGAGAACGAAGAGACACTATGAAAGATTTAAGGACTCTTGCGGCTTACGCACTCGCGCTTTTACTTCTGGCAACATTTGTGTCCCATTCATGGAGTGCACCCAAGggCAGTTTCCAGCGTCGGAACTGGACACCCCAAGCCATGTTATATTTGAAGGGCACACAGGGACGGCGCTTTGTGTCTGAAGACAGAAACGAAGGGGACTTGTATGACACTATACGCTTAgAGTCACGCAGccaaaacacagaaaacctGAGCATCTCTAAAGCGGCTGCATTTCTCTTAAATGTTCTCCAGCAAGCCAGAGACGAGGGTGAGCCTTACTGAAACCGGCTCGGAGAGCACCAACAACCCACTCTTTTCATCTGAATACTTCCAGTTTTGTGAGCCATGTGGAATTTCATGTTTTCAAGTTCATCCTCCGCTGCAGCGATGCCCCGTGTTTGACATCTCTGAAGGTTTATCACTCACTGTTCCACACTATTACCGCTAGATCTGAGTAATGTAGAGATCGGTGTGTCTCCAGATTGTTTATATGATTCCACTCGGACCGATTATTGAAATAACAAAGGCTGACAGTaaggtattttttaatttctttatttctttcaggcgaaagtattaataaaagtgaataatgGTTGTTTTTTCAAGACATATCTTGGAAAAGAGTATTTATGATGATTAAAATTATGTGTAATATAAAGTTAACTGTACAGATTTTTGTCCTATTCATTTTCTCATGTTAAATCGACATGTGAATTGACTGGTctgtaaaatacatatttgcgAATGTGTGAACATTTTCTCaattaattaaactgaatttgCACTGATAA

Function

symbol description
spx Predicted to enable neuropeptide hormone activity; type 2 galanin receptor binding activity; and type 3 galanin receptor binding activity. Involved in cholesterol homeostasis; glucose homeostasis; and triglyceride homeostasis. Acts upstream of or within negative regulation of eating behavior. Located in nucleus. Is expressed in several structures, including central nervous system; heart; liver; male organism; and pleuroperitoneal region. Orthologous to human SPX (spexin hormone).

NR:

description
PREDICTED: spexin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40170 True 3193 lncRNA 0.38 4 8487986 8491938
XM_043237150.1 False 1734 mRNA 0.39 5 8487911 8490613

Neighbor

gene id symbol gene type direction distance location
golt1ba golt1ba,golt1b,LOC107725527,LOC107591215,LOC107586262,LOC107659829,LOC108437943 coding upstream 280 8483973 ~ 8487631 (+)
tcp11l2 tcp11l2,LOC107586172,LOC107589958,LOC107694691,LOC107659845,LOC107744901,LOC107725683 coding upstream 5258 8475706 ~ 8482653 (+)
pkp2 LOC107725677,LOC107659846,LOC107586091,LOC107694692,LOC107589947 coding upstream 13206 8460448 ~ 8474705 (+)
si:dkeyp-38g8.5 si:dkeyp-38g8.5,LOC107595941,LOC107659854,LOC107744947,LOC107690729,LOC107725679 coding upstream 233066 8252084 ~ 8254845 (+)
copg2 copg2,LOC107725548,LOC107676915,LOC107744880 coding upstream 375002 8103345 ~ 8112909 (+)
kiss2 NA coding downstream 10928 8502866 ~ 8504047 (+)
dnai7 casc1,LOC107725557,LOC107659833,LOC107744936 coding downstream 282350 8774288 ~ 8780078 (+)
bcat1 bcat1,LOC107590116,LOC107725514,LOC107664876,LOC107744911,LOC107587341 coding downstream 312254 8804192 ~ 8815015 (+)
igf1 igf1,LOC107659835,LOC107725558,LOC107664880 coding downstream 329792 8821730 ~ 8832632 (+)
pmch pmch,LOC107659836,LOC107591230 coding downstream 349806 8841744 ~ 8843250 (+)
LOC122343529 NA non-coding upstream 110602 8374654 ~ 8377309 (+)
G27084 NA non-coding upstream 156609 8278559 ~ 8331302 (+)
G27073 NA non-coding upstream 188912 8225458 ~ 8298999 (+)
G27066 NA non-coding upstream 312112 8175465 ~ 8175799 (+)
LOC122342736 NA non-coding upstream 355583 8129161 ~ 8132328 (+)
G27162 NA non-coding downstream 260500 8752438 ~ 8752849 (+)
G27301 NA non-coding downstream 460984 8952922 ~ 8953122 (+)
G27345 NA non-coding downstream 562083 9054021 ~ 9057297 (+)
G27347 LOC107590965,LOC107695883 non-coding downstream 565930 9057868 ~ 9058292 (+)
G27352 NA non-coding downstream 576993 9068931 ~ 9076136 (+)
stmp1 NA other upstream 4080 8482890 ~ 8483831 (+)
G27079 NA other upstream 238688 8247912 ~ 8249223 (+)
G26993 NA other upstream 349472 8137738 ~ 8138439 (+)
col7a1l col7a1l,LOC107725642,LOC107744879,LOC107676908,LOC107555540,LOC107592433,LOC108435442 other upstream 387162 8041432 ~ 8100749 (+)
ube2h ube2h,LOC107676921,LOC107690610,LOC105888480 other upstream 929422 7532912 ~ 7558489 (+)
etnk1 etnk1,LOC107725541,LOC107659837,LOC107694683,LOC107590048,LOC107744908 other downstream 41878 8533816 ~ 8548002 (+)
ascl1a ascl1a,ascl1,LOC107590149,LOC107664850,LOC107596391,LOC107744950,LOC106576285 other downstream 382779 8874717 ~ 8890176 (+)
washc3 ccdc53,LOC107695862,LOC107590199,LOC107596601,LOC107744922,LOC107664856 other downstream 523903 9015841 ~ 9018333 (+)
apaf1 apaf1,LOC107744928 other downstream 546700 9038638 ~ 9221046 (+)
G27360 anks1b other downstream 671209 9163147 ~ 9227212 (+)

Expression


Co-expression Network