LOC122343432


Basic Information

Item Value
gene id LOC122343432
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 8247911 ~ 8249927 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40263
TCTTAAGTACGTGAGACAGACGTCCGTTAGCCACGTTTTGCTTTCGATCGTCGGAGAGTGAGCTTGTCTCGTTTGTGGCgacttaaaaacttttttttgtgctatttcAACCACTAGAcgattgttttgtttctctcaAATCGTTTACTTCCGGCAAACCAAAGACGTTTTTATTTGGTGATGTGTCTTGAATTCGCGACAATGAAGGGAAACTACCAGAAGGACATCGAGGCCGCGCCTGTTCACAAGAAAAAGTGGTCGAAATCAAAGAGGAGGACATTTCTACGCGCGAGTATGAGCGAAAGGAGGCGAAAGGTCCGCGTCTGGTCGGCCAGGAGACGGCAGCCGAGTCCGGACAGCGTCGACGTTACGAGGAACCGAAGTTGCGTGCCGTCTGTAGCCATGGCACCCAGAAACACGACGCAGTACTTAATGGACCTGGTGTACGCCGAGCAGTCAGACGTTTTTGATAGAGACTTCGAGAACGTGTTCTTCAGGAATGAAATCTGACGCGTTTCCGAAACCGGACTCGATTTCGTCGGAACGAGACGACTGGGCTGCCGCGAACCCATAGACAGTAATACCATTGCGCAGACTCCAACTCGGGCAGGCGGAACGCTCTGCGTCACGGCTGCGTGATGACGTGTGCACCACGCCCCGCCCCCGGTACGGCGGCCACCACGTGGCCAGCAGGTAAACCCGCTCCACCCTTTGTGTACGCGGTGTAAGAGCGCTGCGGTAGCGTGCTGTCGCGGTGTAATTACTGAGAAATGTGCATGCATTGTTCTGCCAACggatgcatgtgtgttttgggAGACTTTTGCAGGTCGCTGATCCTCCTCGGTGGATTTCAGCTGTCTGTGCAACCCACCCAGAGCCTTGGGACAAAGCCGCATGGCTGCCTGCTCATCACTGCTGGGTAACTGTGGTAAACGTTTGAATGTAAATCCTACACAAGTGCACTCAGAGCTACGATTCGTATGATACACGTTGTGAGAACGTTTGTAAATATTGATTGTATTATctattaaaattgttaattattGAAACTCGCA
>XR_006250777.1
TTTTGTTTGGGAAACAACACAAATCATAGATACACATTTGGGCAGAAATAAGAAACTAATCAGATCTAACAAACGATCTCACTTCGTGCAAGGATGTCTCgcacttttaaattaaaattgcttttttttcacagaaacaaacaaaaactaagatTATATAGACACTTTTTAAAGTGGGAAAACGTTTACCcttttaagattatttaaataataattatacttaGTCTGCATCGTCACATTTCTTTAGAATTGCGGGATACTTTATGAGAAATCATATTTAAGACGCAGGTtgagacacaaaaacaatgaaaaagcaGTGCGGTGAAATACAAAATCACGTCCTGTGTCCCAGCGCTATTACGGAGTTCACGTCGTCTTAAATATGCAAAAGTCTCTTGTTCATGTCAAACCAATTTAATCTGTAAATGAACAATTCGTGATCGACGGGCAGATATGGCAACTCATACGTAATGGTAAGTAGTCTAAGTTAGTTCCATTAACGCGTGAAAACTCTgcttgcatatttatttattttaagtttgtttCTGTGATTTGCGACGACCTTTCTCCGTGTTTGATTGGGTTTTGCTGAACGGGAAGAGCCGCCTACAGCCCGCTCAGGGGGCGCGGCCTCAAACACCGCCGAATAAGACTAGGTGAAAGCTGATTCGCTGGAAGCGAAAAACGTCACTTCCGCAAGTTTCTTAAGTACGTGAGACAGACGTCCGTTAGCCACGTTTTGCTTTCGATCGTCGGAGAGTGAGCTTGTCTCGTTTGTGGCgacttaaaaacttttttttgtgctatttcAACCACTAGAcgattgttttgtttctctcaAATCGTTTACTTCCGGCAAACCAAAGACGTTTTTATTTGGTGATGTGTCTTGAATTCGCGACAATGAAGGGAAACTACCAGAAGGACATCGAGGCCGCGCCTGTTCACAAGAAAAAGTGGTCGAAATCAAAGAGGAGGACATTTCTACGCGCGAGTATGAGCGAAAGGAGGCGAAAGGTCCGCGTCTGGTCGGCCAGGAGACGGCAGCCGAGTCCGGACAGCGTCGACGTTACGAGGAACCGAAGTTGCGTGCCGTCTGTAGCCATGGCACCCAGAAACACGACGCAGTACTTAATGGACCTGGTGTACGCCGAGCAGTCAGACGTTTTTGATGTAAGCCACGACTTCTCCACGCAGAGTAATGTCCCGTCTGATGAGAGCGCTTTCTCAATGTCGGACTCTGACTACGACAGATCTTTGGACTTTCAACAGAGAGACTTCGAGAACGTGTTCTTCAGGAATGAAATCTGACGCGTTTCCGAAACCGGACTCGATTTCGTCGGAACGAGACGACTGGGCTGCCGCGAACCCATAGACAGTAATACCATTGCGCAGACTCCAACTCGGGCAGGCGGAACGCTCTGCGTCACGGCTGCGTGATGACGTGTGCACCACGCCCCGCCCCCGGTACGGCGGCCACCACGTGGCCAGCAGGTAAACCCGCTCCACCCTTTGTGTACGCGGTGTAAGAGCGCTGCGGTAGCGTGCTGTCGCGGTGTAATTACTGAGAAATGTGCATGCATTGTTCTGCCAACggatgcatgtgtgttttgggAGACTTTTGCAGGTCGCTGATCCTCCTCGGTGGATTTCAGCTGTCTGTGCAACCCACCCAGAGCCTTGGGACAAAGCCGCATGGCTGCCTGCTCATCACTGCTGGGTAACTGTGGTAAACGTTTGAATGTAAATCCTACACAAGTGCACTCAGAGCTACGATTCGTATGATACACGTTGTGAGAACGTTTGTAAATATTGATTGTATTATctattaaaattgttaattattGAAACTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40263 False 1055 TUCP 0.51 3 8247911 8249225
XR_006250777.1 True 1854 lncRNA 0.46 2 8247913 8249927

Neighbor

gene id symbol gene type direction distance location
atp2b1a atp2b1a,atp2b1,LOC107676914,LOC107690705,LOC107585291,LOC107725550,LOC107744884 coding downstream 89542 8131796 ~ 8158369 (-)
mest LOC107676916,LOC107725549,LOC107690703,LOC107744881 coding downstream 131459 8112969 ~ 8116452 (-)
chchd3a chchd3,chchd3a,LOC107555550,LOC107676930,LOC107584776,LOC107725634,LOC107690666 coding downstream 332304 7859957 ~ 7915607 (-)
plxna4 plxna4,LOC107725603,LOC107555548,LOC107676920,LOC107729844,LOC107592200 coding downstream 405862 7651083 ~ 7842049 (-)
nrf1 nrf1,LOC107676924,LOC107690626,LOC107725613,LOC107584621,LOC107555547 coding downstream 659494 7572881 ~ 7588417 (-)
epyc epyc,LOC107744933,LOC107690887,LOC107592694,LOC107659828,LOC107725680,LOC107565627 coding upstream 5623 8255550 ~ 8266189 (-)
kera LOC107725681,LOC107744893,LOC107690746,LOC107596099 coding upstream 17797 8267724 ~ 8274530 (-)
lum lum,LOC107659852,LOC107565637,LOC107725655,LOC107744894,LOC107690761,LOC107585613 coding upstream 28633 8278560 ~ 8281902 (-)
dcn LOC107744892,LOC107690767,LOC107585689,LOC107659851,LOC107565639,LOC107725622 coding upstream 39328 8289255 ~ 8304456 (-)
LOC122342541 LOC107725512,LOC107565629,LOC107690781,LOC107744891,LOC107585840 coding upstream 71527 8321454 ~ 8325846 (-)
LOC122342531 NA non-coding downstream 1402 8200177 ~ 8246509 (-)
LOC122342218 NA non-coding downstream 78324 8168273 ~ 8169587 (-)
G27063 NA non-coding downstream 121087 8126342 ~ 8126824 (-)
G27050 NA non-coding downstream 124051 8123114 ~ 8123860 (-)
G27051 NA non-coding downstream 126203 8121346 ~ 8121708 (-)
G27240 NA non-coding upstream 226237 8476164 ~ 8478311 (-)
G27249 LOC107725541,LOC107659837,LOC107590048 non-coding upstream 283904 8533831 ~ 8536676 (-)
LOC122343385 NA non-coding upstream 512172 8762099 ~ 8774171 (-)
G27263 NA non-coding upstream 554228 8804155 ~ 8805230 (-)
G27257 NA non-coding upstream 555317 8805244 ~ 8809184 (-)
G26951 NA other downstream 689458 7555115 ~ 7558453 (-)
si:dkey-261e22.4 NA other downstream 1027000 7214334 ~ 7220911 (-)
il22 NA other downstream 1507170 6737641 ~ 6740741 (-)
msrb3 msrb3,LOC107725596,LOC107587134,LOC107757268,LOC107561995 other downstream 1886427 6350491 ~ 6361484 (-)
arhgef39 arhgef39,LOC107725686,LOC107655603,LOC107757260,LOC107694288 other downstream 1995263 6085892 ~ 6252648 (-)
G27232 LOC107589947,LOC107725677,LOC107659846,LOC107586091,LOC107694692 other upstream 210579 8460506 ~ 8468028 (-)
slc25a3a slc25a3a,slc25a3,LOC107744906,LOC107586622,LOC108437945,LOC105897470,LOC108279629,LOC107694680,LOC107593070 other upstream 263703 8513630 ~ 8517583 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other upstream 620288 8870215 ~ 8874598 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other upstream 642092 8892019 ~ 8941403 (-)
klhl42 klhl42 other upstream 754333 9004260 ~ 9009304 (-)

Expression


Co-expression Network