G27425


Basic Information

Item Value
gene id G27425
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9023877 ~ 9024077 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40644
catacagcatatatttttatgcaaatatttatatgcacgTATTTACacctatatatttatactgaTGTAACTGATatcaaatatattgaatatgtataaacgtaaaatattttttattaaatatatgcatgcatgtgtaattATACGTAATTAGCATACACGGTGCACACACATtatgtcatttatataaataaaatgttt

Function

NR:

description
PREDICTED: ARL14 effector protein

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40644 True 201 lncRNA 0.22 1 9023877 9024077

Neighbor

gene id symbol gene type direction distance location
dram1 LOC107725538,LOC107591237,LOC107695863,LOC107664855,LOC107596679,LOC107744952 coding downstream 445 9018330 ~ 9023432 (-)
nrip2 nrip2,LOC107725649,LOC107695877,LOC107588270,LOC107744921,LOC107664860,LOC107590947 coding downstream 23419 8977878 ~ 9000458 (-)
pah pah,LOC107695873,LOC107744915 coding downstream 138861 8874712 ~ 8885016 (-)
LOC122343226 parpbp,LOC107744914,LOC107659825,LOC107590919,LOC107593393,LOC107664835 coding downstream 166827 8843207 ~ 8857050 (-)
LOC122343383 LOC107659831,LOC107744910,LOC107664834 coding downstream 220037 8780290 ~ 8803840 (-)
chpt1 chpt1,LOC107590206,LOC107725616,LOC107695881,LOC107744925,LOC107664854,LOC107588513,LOC107085961 coding upstream 17936 9042013 ~ 9048831 (-)
mybpc1 mybpc1,LOC107695883 coding upstream 25444 9049521 ~ 9082049 (-)
spi2 LOC107590970,LOC107695852,LOC107725518,LOC108233215 coding upstream 62467 9086544 ~ 9088361 (-)
spic spic,LOC107695854,LOC107725559,LOC107590981,LOC107596776,LOC107744943,LOC107664892 coding upstream 65513 9089590 ~ 9092106 (-)
dnajb9b LOC107725537,LOC107590229,LOC107596855,LOC107664893,LOC107695887,LOC107744927 coding upstream 73828 9097905 ~ 9100722 (-)
G27417 NA non-coding downstream 19654 9003923 ~ 9004223 (-)
G27306 LOC107725624,LOC107744919,LOC107590167,LOC107587911,LOC107664885,LOC107695875 non-coding downstream 62444 8960446 ~ 8961433 (-)
G27279 NA non-coding downstream 135924 8887186 ~ 8887953 (-)
G27253 NA non-coding downstream 208865 8809767 ~ 8815012 (-)
G27257 NA non-coding downstream 214693 8805244 ~ 8809184 (-)
LOC122343442 NA non-coding upstream 305930 9330007 ~ 9341739 (-)
G27469 NA non-coding upstream 474639 9498716 ~ 9504000 (-)
G27532 NA non-coding upstream 521131 9545208 ~ 9545421 (-)
LOC122342618 NA non-coding upstream 523562 9547639 ~ 9552161 (-)
G27540 LOC107732962,LOC107553866,LOC107725684,LOC107695899 non-coding upstream 541370 9565447 ~ 9568297 (-)
klhl42 klhl42 other downstream 14573 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 82474 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 149279 8870215 ~ 8874598 (-)
slc25a3a slc25a3a,slc25a3,LOC107744906,LOC107586622,LOC108437945,LOC105897470,LOC108279629,LOC107694680,LOC107593070 other downstream 506294 8513630 ~ 8517583 (-)
G27232 LOC107589947,LOC107725677,LOC107659846,LOC107586091,LOC107694692 other downstream 555849 8460506 ~ 8468028 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other upstream 247895 9271972 ~ 9300179 (-)
zgc:193726 NA other upstream 1331634 10355711 ~ 10363566 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 1460845 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 1500454 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 2390643 11414720 ~ 11573766 (-)

Expression


Co-expression Network